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Mouse SNP Summary
Symbol
Name
ID 		Tssr134687
transcription start site region 134687
MGI:6062454

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236665416
MGI SNP Detail		 Chr15:73055236 Ago2 within coordinates of
Tssr134687 1915 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256583878
MGI SNP Detail		 Chr15:73055266 Ago2 within coordinates of
Tssr134687 1885 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214466044
MGI SNP Detail		 Chr15:73055296 Ago2 within coordinates of
Tssr134687 1855 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C T C T T
rs231419282
MGI SNP Detail		 Chr15:73055356 Ago2 within coordinates of
Tssr134687 1795 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G C C G G G G G C G G G G G G C G G G G G G G G G G G G
rs251844666
MGI SNP Detail		 Chr15:73055464 Ago2 within coordinates of
Tssr134687 1687 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220799159
MGI SNP Detail		 Chr15:73055589 Ago2 within coordinates of
Tssr134687 1562 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241018185
MGI SNP Detail		 Chr15:73055629 Ago2 within coordinates of
Tssr134687 1522 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263607616
MGI SNP Detail		 Chr15:73055720 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 1431 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T
rs32361837
MGI SNP Detail		 Chr15:73055976 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 1175 bp downstream
 SNP G/T T G
rs243919840
MGI SNP Detail		 Chr15:73056073 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 1078 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A T T A A A A A T A A A A A A T A A A A A A A A A A A A
rs261885348
MGI SNP Detail		 Chr15:73056275 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 876 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G C C
rs225196360
MGI SNP Detail		 Chr15:73056309 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 842 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238255775
MGI SNP Detail		 Chr15:73056338 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 813 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G T T G G G G G T G G G G G G T G G G G G G G G G G G G
rs257455001
MGI SNP Detail		 Chr15:73056381 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 770 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A G G A A A A G A A A A A A A A A A A A A A G A A A A
rs227718844
MGI SNP Detail		 Chr15:73056429 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 722 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253998117
MGI SNP Detail		 Chr15:73056498 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 653 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266151224
MGI SNP Detail		 Chr15:73056506 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 645 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228152023
MGI SNP Detail		 Chr15:73056562 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 589 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs254617601
MGI SNP Detail		 Chr15:73056700 Ago2 within coordinates of
Cpgi7161 within coordinates of
Tssr134687 451 bp downstream
 SNP C/G C C C C C C C C C C C C C C C G C C C C C G C G C C G G C C C C C C C
rs214259320
MGI SNP Detail		 Chr15:73056798 Cpgi7161 within coordinates of
Rr504021 within coordinates of
Tssr134684 within coordinates of
Tssr134687 353 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580528846
MGI SNP Detail		 Chr15:73056879 Cpgi7161 within coordinates of
Rr404436 within coordinates of
Rr504021 within coordinates of
Tssr134687 272 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233240279
MGI SNP Detail		 Chr15:73056918 Cpgi7161 within coordinates of
Rr404436 within coordinates of
Rr504021 within coordinates of
Tssr134687 233 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246757916
MGI SNP Detail		 Chr15:73057079 Cpgi7161 within coordinates of
Rr404436 within coordinates of
Rr504021 within coordinates of
Tssr134687 72 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214979581
MGI SNP Detail		 Chr15:73057169 Cpgi7161 within coordinates of
Rr504021 within coordinates of
Tssr134687 3 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs234527731
MGI SNP Detail		 Chr15:73057288 Cpgi7161 within coordinates of
Tssr134687 122 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32189179
MGI SNP Detail		 Chr15:73057325 Cpgi7161 within coordinates of
Tssr134687 159 bp upstream
 SNP C/G C G
rs226723392
MGI SNP Detail		 Chr15:73057374 Cpgi7161 within coordinates of
Tssr134687 208 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234319237
MGI SNP Detail		 Chr15:73057399 Cpgi7161 within coordinates of
Tssr134687 233 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261568173
MGI SNP Detail		 Chr15:73057419 Cpgi7161 within coordinates of
Tssr134687 253 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584309674
MGI SNP Detail		 Chr15:73057501 Cpgi7161 within coordinates of
Tssr134687 335 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579164822
MGI SNP Detail		 Chr15:73057525 Cpgi7161 within coordinates of
Tssr134687 359 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219335511
MGI SNP Detail		 Chr15:73057598 Tssr134687 432 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238292021
MGI SNP Detail		 Chr15:73057708 Tssr134687 542 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257045440
MGI SNP Detail		 Chr15:73057796 Tssr134687 630 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221569846
MGI SNP Detail		 Chr15:73057798 Tssr134687 632 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250324918
MGI SNP Detail		 Chr15:73057824 Tssr134687 658 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264467675
MGI SNP Detail		 Chr15:73057834 Tssr134687 668 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228354974
MGI SNP Detail		 Chr15:73057893 Tssr134687 727 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249945191
MGI SNP Detail		 Chr15:73057918 Tssr134687 752 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257958927
MGI SNP Detail		 Chr15:73057923 Tssr134687 757 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226912426
MGI SNP Detail		 Chr15:73057948 Tssr134687 782 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582825239
MGI SNP Detail		 Chr15:73058030 Tssr134687 864 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31636021
MGI SNP Detail		 Chr15:73058038 Tssr134687 872 bp upstream
 SNP A/C A A C
rs259008808
MGI SNP Detail		 Chr15:73058066 Tssr134687 900 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218866240
MGI SNP Detail		 Chr15:73058076 Tssr134687 910 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235903569
MGI SNP Detail		 Chr15:73058099 Tssr134687 933 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G A A G G G G A G A A G G A A A G G G G G A G G A A
rs255937006
MGI SNP Detail		 Chr15:73058110 Tssr134687 944 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219363726
MGI SNP Detail		 Chr15:73058112 Tssr134687 946 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232084316
MGI SNP Detail		 Chr15:73058167 Tssr134687 1001 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251121213
MGI SNP Detail		 Chr15:73058227 Tssr134687 1061 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T A T T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221324155
MGI SNP Detail		 Chr15:73058238 Tssr134687 1072 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A A A C C C C C C A C A A C C A A C C C C C C C C C
rs247280685
MGI SNP Detail		 Chr15:73058257 Tssr134687 1091 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T T T C T C T C C C T T T T C C T T T C C C C C T T C T T
rs264331565
MGI SNP Detail		 Chr15:73058288 Rr504024 within coordinates of
Tssr134687 1122 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs220622231
MGI SNP Detail		 Chr15:73058322 Rr504024 within coordinates of
Tssr134687 1156 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245135805
MGI SNP Detail		 Chr15:73058460 Rr504024 within coordinates of
Tssr134687 1294 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G A G G G G G G A G G G G G G G G G G G G
rs578961980
MGI SNP Detail		 Chr15:73058461 Rr504024 within coordinates of
Tssr134687 1295 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257586944
MGI SNP Detail		 Chr15:73058489 Rr504024 within coordinates of
Tssr134687 1323 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226953712
MGI SNP Detail		 Chr15:73058502 Rr504024 within coordinates of
Tssr134687 1336 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240849444
MGI SNP Detail		 Chr15:73058565 Rr504024 within coordinates of
Tssr134687 1399 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260284159
MGI SNP Detail		 Chr15:73058692 Rr504024 within coordinates of
Tssr134687 1526 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234424138
MGI SNP Detail		 Chr15:73058712 Rr504024 within coordinates of
Tssr134687 1546 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254949785
MGI SNP Detail		 Chr15:73058781 Rr504024 within coordinates of
Tssr134687 1615 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218853337
MGI SNP Detail		 Chr15:73058844 Rr369949 within coordinates of
Rr504024 within coordinates of
Tssr134687 1678 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227373068
MGI SNP Detail		 Chr15:73058858 Rr369949 within coordinates of
Rr504024 within coordinates of
Tssr134687 1692 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242782645
MGI SNP Detail		 Chr15:73058988 Rr504024 within coordinates of
Tssr134687 1822 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213310262
MGI SNP Detail		 Chr15:73059105 Rr504024 within coordinates of
Tssr134687 1939 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232119783
MGI SNP Detail		 Chr15:73059125 Rr504024 within coordinates of
Tssr134687 1959 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251241285
MGI SNP Detail		 Chr15:73059128 Rr504024 within coordinates of
Tssr134687 1962 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 68 of 68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory