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Mouse SNP Summary
Symbol
Name
ID 		Tssr135345
transcription start site region 135345
MGI:6063112

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212514651
MGI SNP Detail		 Chr15:79324055 Csnk1e within coordinates of
Tssr135345 1947 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A A A A A A A A A A A A A A A A A A
rs237699504
MGI SNP Detail		 Chr15:79324223 Csnk1e within coordinates of
Tssr135345 1779 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257427205
MGI SNP Detail		 Chr15:79324317 Csnk1e within coordinates of
Tssr135345 1685 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220676102
MGI SNP Detail		 Chr15:79324371 Csnk1e within coordinates of
Tssr135345 1631 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240782610
MGI SNP Detail		 Chr15:79324415 Csnk1e within coordinates of
Tssr135345 1587 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A A A A A A A A A A A A A C A A A A
rs253861022
MGI SNP Detail		 Chr15:79324504 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1498 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222823004
MGI SNP Detail		 Chr15:79324536 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1466 bp downstream
 SNP A/G A A A G G G G G G G G G G G G G A A A G G G G G G G G G G A G A A G A A G G G G G G G G G G G G G G G G G
rs242948474
MGI SNP Detail		 Chr15:79324547 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1455 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264706233
MGI SNP Detail		 Chr15:79324548 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1454 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs228824900
MGI SNP Detail		 Chr15:79324669 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1333 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs246098558
MGI SNP Detail		 Chr15:79324705 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1297 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262760191
MGI SNP Detail		 Chr15:79324827 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1175 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226830381
MGI SNP Detail		 Chr15:79324900 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 1102 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245826017
MGI SNP Detail		 Chr15:79325078 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 924 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs216579363
MGI SNP Detail		 Chr15:79325202 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 800 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228996919
MGI SNP Detail		 Chr15:79325210 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 792 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs578338754
MGI SNP Detail		 Chr15:79325382 Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 620 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248944991
MGI SNP Detail		 Chr15:79325489 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 513 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs213018529
MGI SNP Detail		 Chr15:79325554 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 448 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235876564
MGI SNP Detail		 Chr15:79325561 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 441 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262292130
MGI SNP Detail		 Chr15:79325562 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 440 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236793990
MGI SNP Detail		 Chr15:79325569 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 433 bp downstream
 SNP T T T
rs234384736
MGI SNP Detail		 Chr15:79325574 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 428 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253827104
MGI SNP Detail		 Chr15:79325590 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 412 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222946435
MGI SNP Detail		 Chr15:79325646 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 356 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251772661
MGI SNP Detail		 Chr15:79325669 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 333 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255657020
MGI SNP Detail		 Chr15:79325711 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 291 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221337839
MGI SNP Detail		 Chr15:79325882 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 120 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243187303
MGI SNP Detail		 Chr15:79325942 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505648 within coordinates of
Tssr135345 60 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs256403003
MGI SNP Detail		 Chr15:79326520 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505649 within coordinates of
Tssr135345 460 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226798731
MGI SNP Detail		 Chr15:79326527 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505649 within coordinates of
Tssr135345 467 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240018377
MGI SNP Detail		 Chr15:79326552 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Rr505649 within coordinates of
Tssr135345 492 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259020004
MGI SNP Detail		 Chr15:79326773 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Tssr135345 713 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229102170
MGI SNP Detail		 Chr15:79326831 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Tssr135345 771 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252452968
MGI SNP Detail		 Chr15:79326833 Cpgi7334 within coordinates of
Csnk1e within coordinates of
Tssr135345 773 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs212594322
MGI SNP Detail		 Chr15:79326855 Csnk1e within coordinates of
Tssr135345 795 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229953742
MGI SNP Detail		 Chr15:79326920 Csnk1e within coordinates of
Tssr135345 860 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251145457
MGI SNP Detail		 Chr15:79327065 Csnk1e within coordinates of
Tssr135345 1005 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214873320
MGI SNP Detail		 Chr15:79327080 Csnk1e within coordinates of
Tssr135345 1020 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234484066
MGI SNP Detail		 Chr15:79327096 Csnk1e within coordinates of
Tssr135345 1036 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247591284
MGI SNP Detail		 Chr15:79327198 Csnk1e within coordinates of
Tssr135345 1138 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585703439
MGI SNP Detail		 Chr15:79327275 Csnk1e within coordinates of
Tssr135345 1215 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217050440
MGI SNP Detail		 Chr15:79327277 Csnk1e within coordinates of
Tssr135345 1217 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240588990
MGI SNP Detail		 Chr15:79327288 Csnk1e within coordinates of
Tssr135345 1228 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs261121260
MGI SNP Detail		 Chr15:79327304 Csnk1e within coordinates of
Tssr135345 1244 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs221738043
MGI SNP Detail		 Chr15:79327343 Csnk1e within coordinates of
Tssr135345 1283 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238330126
MGI SNP Detail		 Chr15:79327388 Csnk1e within coordinates of
Tssr135345 1328 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31831357
MGI SNP Detail		 Chr15:79327394 Csnk1e within coordinates of
Tssr135345 1334 bp upstream
 SNP C/T C T C T T T
rs220808039
MGI SNP Detail		 Chr15:79327435 Csnk1e within coordinates of
Tssr135345 1375 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240136829
MGI SNP Detail		 Chr15:79327530 Csnk1e within coordinates of
Tssr135345 1470 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258977799
MGI SNP Detail		 Chr15:79327571 Csnk1e within coordinates of
Tssr135345 1511 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227182039
MGI SNP Detail		 Chr15:79327628 Csnk1e within coordinates of
Tssr135345 1568 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240967504
MGI SNP Detail		 Chr15:79327649 Csnk1e within coordinates of
Tssr135345 1589 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31559564
MGI SNP Detail		 Chr15:79327660 Csnk1e within coordinates of
Tssr135345 1600 bp upstream
 SNP G/T T G G G
rs229534478
MGI SNP Detail		 Chr15:79327705 Csnk1e within coordinates of
Tssr135345 1645 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255978844
MGI SNP Detail		 Chr15:79327750 Csnk1e within coordinates of
Tssr135345 1690 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258905035
MGI SNP Detail		 Chr15:79327760 Csnk1e within coordinates of
Tssr135345 1700 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227819826
MGI SNP Detail		 Chr15:79327762 Csnk1e within coordinates of
Tssr135345 1702 bp upstream
 SNP A/G G G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G A A G G G G A G A G
rs247733722
MGI SNP Detail		 Chr15:79327873 Csnk1e within coordinates of
Tssr135345 1813 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216979726
MGI SNP Detail		 Chr15:79327909 Csnk1e within coordinates of
Tssr135345 1849 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51159450
MGI SNP Detail		 Chr15:79327938 Csnk1e within coordinates of
Tssr135345 1878 bp upstream
 SNP T T T T T
rs249339159
MGI SNP Detail		 Chr15:79327951 Csnk1e within coordinates of
Tssr135345 1891 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213611968
MGI SNP Detail		 Chr15:79327992 Csnk1e within coordinates of
Tssr135345 1932 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs578829610
MGI SNP Detail		 Chr15:79328006 Csnk1e within coordinates of
Tssr135345 1946 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236498384
MGI SNP Detail		 Chr15:79328015 Csnk1e within coordinates of
Tssr135345 1955 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 65 of 65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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