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Mouse SNP Summary
Symbol
Name
ID
Tssr135590
transcription start site region 135590
MGI:6063357

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231901929
MGI SNP Detail
Chr15:82766586 Tcf20 within coordinates of
Tssr135590 2000 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs261654512
MGI SNP Detail
Chr15:82766587 Tcf20 within coordinates of
Tssr135590 1999 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs220658477
MGI SNP Detail
Chr15:82766654 Tcf20 within coordinates of
Tssr135590 1932 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs243789135
MGI SNP Detail
Chr15:82766856 Tcf20 within coordinates of
Tssr135590 1730 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs264373396
MGI SNP Detail
Chr15:82766935 Tcf20 within coordinates of
Tssr135590 1651 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221897178
MGI SNP Detail
Chr15:82766958 Tcf20 within coordinates of
Tssr135590 1628 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs239980066
MGI SNP Detail
Chr15:82766959 Tcf20 within coordinates of
Tssr135590 1627 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs257257096
MGI SNP Detail
Chr15:82767020 Tcf20 within coordinates of
Tssr135590 1566 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225802217
MGI SNP Detail
Chr15:82767227 Tcf20 within coordinates of
Tssr135590 1359 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250381892
MGI SNP Detail
Chr15:82767258 Tcf20 within coordinates of
Tssr135590 1328 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264791077
MGI SNP Detail
Chr15:82767375 Tcf20 within coordinates of
Tssr135590 1211 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227435748
MGI SNP Detail
Chr15:82767391 Tcf20 within coordinates of
Tssr135590 1195 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260432903
MGI SNP Detail
Chr15:82767572 Tcf20 within coordinates of
Tssr135590 1014 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578583474
MGI SNP Detail
Chr15:82767586 Tcf20 within coordinates of
Tssr135590 1000 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216912468
MGI SNP Detail
Chr15:82767605 Tcf20 within coordinates of
Tssr135590 981 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs235098733
MGI SNP Detail
Chr15:82767612 Tcf20 within coordinates of
Tssr135590 974 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A T A A A A A A A A A A T
rs246854118
MGI SNP Detail
Chr15:82767618 Tcf20 within coordinates of
Tssr135590 968 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs578933407
MGI SNP Detail
Chr15:82767630 Tcf20 within coordinates of
Tssr135590 956 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579594725
MGI SNP Detail
Chr15:82767650 Tcf20 within coordinates of
Tssr135590 936 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
rs583414357
MGI SNP Detail
Chr15:82767660 Tcf20 within coordinates of
Tssr135590 926 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs214801000
MGI SNP Detail
Chr15:82767664 Tcf20 within coordinates of
Tssr135590 922 bp downstream
SNP A/C/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G C G G G G G G G G G G G
rs231771212
MGI SNP Detail
Chr15:82767669 Tcf20 within coordinates of
Tssr135590 917 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs256355835
MGI SNP Detail
Chr15:82767670 Tcf20 within coordinates of
Tssr135590 916 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs51937973
MGI SNP Detail
Chr15:82767677 Tcf20 within coordinates of
Tssr135590 909 bp downstream
SNP A/C C C C C C A C C C
rs581216156
MGI SNP Detail
Chr15:82767711 Tcf20 within coordinates of
Tssr135590 875 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583961253
MGI SNP Detail
Chr15:82767712 Tcf20 within coordinates of
Tssr135590 874 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs580870987
MGI SNP Detail
Chr15:82767721 Tcf20 within coordinates of
Tssr135590 865 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs240479813
MGI SNP Detail
Chr15:82767737 Tcf20 within coordinates of
Tssr135590 849 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs584257029
MGI SNP Detail
Chr15:82767779 Tcf20 within coordinates of
Tssr135590 807 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs578347811
MGI SNP Detail
Chr15:82767842 Tcf20 within coordinates of
Tssr135590 744 bp downstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263864197
MGI SNP Detail
Chr15:82767860 Tcf20 within coordinates of
Tssr135590 726 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221873232
MGI SNP Detail
Chr15:82767889 Tcf20 within coordinates of
Tssr135590 697 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239944687
MGI SNP Detail
Chr15:82767918 Tcf20 within coordinates of
Tssr135590 668 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251174096
MGI SNP Detail
Chr15:82767957 Tcf20 within coordinates of
Tssr135590 629 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220023391
MGI SNP Detail
Chr15:82767987 Tcf20 within coordinates of
Tssr135590 599 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs245557910
MGI SNP Detail
Chr15:82767991 Tcf20 within coordinates of
Tssr135590 595 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs261785764
MGI SNP Detail
Chr15:82768061 Tcf20 within coordinates of
Tssr135590 525 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227778098
MGI SNP Detail
Chr15:82768063 Tcf20 within coordinates of
Tssr135590 523 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248110375
MGI SNP Detail
Chr15:82768321 Tcf20 within coordinates of
Tssr135590 265 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs31976497
MGI SNP Detail
Chr15:82768376 Tcf20 within coordinates of
Tssr135590 210 bp downstream
SNP C/T C C T C
rs260480556
MGI SNP Detail
Chr15:82768505 Tcf20 within coordinates of
Tssr135590 81 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228247136
MGI SNP Detail
Chr15:82768755 Tcf20 within coordinates of
Tssr135590 166 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246779620
MGI SNP Detail
Chr15:82768798 Tcf20 within coordinates of
Tssr135590 209 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs214713118
MGI SNP Detail
Chr15:82768831 Tcf20 within coordinates of
Tssr135590 242 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs230511197
MGI SNP Detail
Chr15:82768848 Tcf20 within coordinates of
Tssr135590 259 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs254743713
MGI SNP Detail
Chr15:82768932 Tcf20 within coordinates of
Tssr135590 343 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs212091165
MGI SNP Detail
Chr15:82768951 Tcf20 within coordinates of
Tssr135590 362 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs243196458
MGI SNP Detail
Chr15:82768971 Tcf20 within coordinates of
Tssr135590 382 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs252744466
MGI SNP Detail
Chr15:82769000 Tcf20 within coordinates of
Tssr135590 411 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581219215
MGI SNP Detail
Chr15:82769024 Tcf20 within coordinates of
Tssr135590 435 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216103011
MGI SNP Detail
Chr15:82769271 Tcf20 within coordinates of
Tssr135590 682 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47825465
MGI SNP Detail
Chr15:82769326 Tcf20 within coordinates of
Tssr135590 737 bp upstream
SNP A/T A A A A A A T A A A T A A A A
rs251140631
MGI SNP Detail
Chr15:82769394 Tcf20 within coordinates of
Tssr135590 805 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219997662
MGI SNP Detail
Chr15:82769638 Tcf20 within coordinates of
Tssr135590 1049 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243090566
MGI SNP Detail
Chr15:82769664 Tcf20 within coordinates of
Tssr135590 1075 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261550439
MGI SNP Detail
Chr15:82769674 Tcf20 within coordinates of
Tssr135590 1085 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219905048
MGI SNP Detail
Chr15:82769858 Tcf20 within coordinates of
Tssr135590 1269 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250809253
MGI SNP Detail
Chr15:82769950 Tcf20 within coordinates of
Tssr135590 1361 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs260415251
MGI SNP Detail
Chr15:82770081 Tcf20 within coordinates of
Tssr135590 1492 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581259838
MGI SNP Detail
Chr15:82770106 Tcf20 within coordinates of
Tssr135590 1517 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs579153854
MGI SNP Detail
Chr15:82770147 Tcf20 within coordinates of
Tssr135590 1558 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582218184
MGI SNP Detail
Chr15:82770168 Tcf20 within coordinates of
Tssr135590 1579 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585180863
MGI SNP Detail
Chr15:82770272 Tcf20 within coordinates of
Tssr135590 1683 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579214712
MGI SNP Detail
Chr15:82770300 Tcf20 within coordinates of
Tssr135590 1711 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs582782465
MGI SNP Detail
Chr15:82770301 Tcf20 within coordinates of
Tssr135590 1712 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585662085
MGI SNP Detail
Chr15:82770373 Tcf20 within coordinates of
Tssr135590 1784 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579560514
MGI SNP Detail
Chr15:82770383 Tcf20 within coordinates of
Tssr135590 1794 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582330711
MGI SNP Detail
Chr15:82770411 Tcf20 within coordinates of
Tssr135590 1822 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585292905
MGI SNP Detail
Chr15:82770491 Tcf20 within coordinates of
Tssr135590 1902 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs580163556
MGI SNP Detail
Chr15:82770508 Tcf20 within coordinates of
Tssr135590 1919 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory