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Mouse SNP Summary
Symbol
Name
ID 		Tssr136776
transcription start site region 136776
MGI:6064543

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216241265
MGI SNP Detail		 Chr15:103251233 Rr510620 within coordinates of
Tssr136776 1968 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583739540
MGI SNP Detail		 Chr15:103251516 Tssr136776 1685 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226911422
MGI SNP Detail		 Chr15:103251597 Tssr136776 1604 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs31915529
MGI SNP Detail		 Chr15:103251718 Tssr136776 1483 bp downstream
 SNP A/G A A G A A A G G G G A G G G
rs260520792
MGI SNP Detail		 Chr15:103251747 Tssr136776 1454 bp downstream
 SNP G/T G T
rs255655159
MGI SNP Detail		 Chr15:103251768 Tssr136776 1433 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C
rs214995218
MGI SNP Detail		 Chr15:103251769 Tssr136776 1432 bp downstream
 SNP A/G G G G G G G G G G G G G A A G G G G G G G G G G G A A G G G G G G G G
rs231502484
MGI SNP Detail		 Chr15:103251799 Tssr136776 1402 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253595571
MGI SNP Detail		 Chr15:103251899 Tssr136776 1302 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs220970500
MGI SNP Detail		 Chr15:103251929 Tssr136776 1272 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs236336808
MGI SNP Detail		 Chr15:103252031 Rr510622 within coordinates of
Tssr136776 1170 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46397988
MGI SNP Detail		 Chr15:103252098 Tssr136776 1103 bp downstream
 SNP C/T C C C C C C T C C C C C
rs221046733
MGI SNP Detail		 Chr15:103252236 Tssr136776 965 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243782224
MGI SNP Detail		 Chr15:103252243 Tssr136776 958 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262642749
MGI SNP Detail		 Chr15:103252251 Tssr136776 950 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220287874
MGI SNP Detail		 Chr15:103252278 Tssr136776 923 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237825671
MGI SNP Detail		 Chr15:103252543 Tssr136776 658 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs47823777
MGI SNP Detail		 Chr15:103252637 Tssr136776 564 bp downstream
 SNP A/G A A G A G A A G A A A A
rs227211430
MGI SNP Detail		 Chr15:103252805 Itga5 within coordinates of
Tssr136776 396 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48378454
MGI SNP Detail		 Chr15:103252874 Itga5 within coordinates of
Tssr136776 327 bp downstream
 SNP C/T C C C C C C C C T
rs265956048
MGI SNP Detail		 Chr15:103252981 Itga5 within coordinates of
Tssr136776 220 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs49966120
MGI SNP Detail		 Chr15:103253024 Itga5 within coordinates of
Tssr136776 177 bp downstream
 SNP C/T T T T T T T T T T T C T
rs252964055
MGI SNP Detail		 Chr15:103253085 Itga5 within coordinates of
Tssr136776 116 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214532551
MGI SNP Detail		 Chr15:103253228 Itga5 within coordinates of
Tssr136776 12 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231595404
MGI SNP Detail		 Chr15:103253239 Itga5 within coordinates of
Tssr136776 23 bp upstream
Tssr136777 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247166501
MGI SNP Detail		 Chr15:103253240 Itga5 within coordinates of
Tssr136776 24 bp upstream
Tssr136777 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs32104609
MGI SNP Detail		 Chr15:103253251 Itga5 within coordinates of
Tssr136776 35 bp upstream
Tssr136777 within coordinates of
 SNP C/T C C C C T T T
rs236398104
MGI SNP Detail		 Chr15:103253369 Itga5 within coordinates of
Tssr136776 153 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260237940
MGI SNP Detail		 Chr15:103253370 Itga5 within coordinates of
Tssr136776 154 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48013453
MGI SNP Detail		 Chr15:103253395 Itga5 within coordinates of
Tssr136776 179 bp upstream
 SNP C/T T T T T T T T T T T C T
rs234288256
MGI SNP Detail		 Chr15:103253838 Itga5 within coordinates of
Tssr136776 622 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs51361682
MGI SNP Detail		 Chr15:103253935 Itga5 within coordinates of
Tssr136776 719 bp upstream
 SNP C/T T T T T T C T C T C
rs219159103
MGI SNP Detail		 Chr15:103254041 Itga5 within coordinates of
Tssr136776 825 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239779078
MGI SNP Detail		 Chr15:103254112 Itga5 within coordinates of
Tssr136776 896 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs51843117
MGI SNP Detail		 Chr15:103254114 Itga5 within coordinates of
Tssr136776 898 bp upstream
 SNP A/G A A A A A A G A A A A A
rs51425084
MGI SNP Detail		 Chr15:103254129 Itga5 within coordinates of
Tssr136776 913 bp upstream
 SNP A/G A A A A A A G A A A A
rs46085962
MGI SNP Detail		 Chr15:103254173 Itga5 within coordinates of
Tssr136776 957 bp upstream
 SNP A/C A A A A A A A A A A C A
rs264188872
MGI SNP Detail		 Chr15:103254207 Itga5 within coordinates of
Tssr136776 991 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583152883
MGI SNP Detail		 Chr15:103254241 Itga5 within coordinates of
Tssr136776 1025 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs50201431
MGI SNP Detail		 Chr15:103254323 Itga5 within coordinates of
Tssr136776 1107 bp upstream
 SNP A/G G G G G G G G G G G A G
rs249163254
MGI SNP Detail		 Chr15:103254354 Itga5 within coordinates of
Tssr136776 1138 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258382419
MGI SNP Detail		 Chr15:103254385 Itga5 within coordinates of
Tssr136776 1169 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51456960
MGI SNP Detail		 Chr15:103254472 Itga5 within coordinates of
Tssr136776 1256 bp upstream
 SNP C/T T T T T T T T T T T C T
rs46808449
MGI SNP Detail		 Chr15:103254478 Itga5 within coordinates of
Tssr136776 1262 bp upstream
 SNP C/G G G G G G G G G C G G G
rs247400746
MGI SNP Detail		 Chr15:103254546 Itga5 within coordinates of
Tssr136776 1330 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215105913
MGI SNP Detail		 Chr15:103254836 Itga5 within coordinates of
Tssr136776 1620 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240137981
MGI SNP Detail		 Chr15:103254852 Itga5 within coordinates of
Tssr136776 1636 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259212675
MGI SNP Detail		 Chr15:103254881 Itga5 within coordinates of
Tssr136776 1665 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45853388
MGI SNP Detail		 Chr15:103254920 Itga5 within coordinates of
Tssr136776 1704 bp upstream
 SNP A/C C C A A A
rs51473524
MGI SNP Detail		 Chr15:103254921 Itga5 within coordinates of
Tssr136776 1705 bp upstream
 SNP A/C A A C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250201250
MGI SNP Detail		 Chr15:103254992 Itga5 within coordinates of
Tssr136776 1776 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50134323
MGI SNP Detail		 Chr15:103254994 Itga5 within coordinates of
Tssr136776 1778 bp upstream
 SNP A/G A A A A A G A G A A
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Showing SNP(s) 1 - 52 of 52
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory