Tssr136823 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr136823
transcription start site region 136823
MGI:6064590

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Showing SNP(s) 1 - 58 of 58

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs48795604 MGI SNP Detail	Chr16:3546136	Tssr136823 1981 bp upstream	SNP	C/T				T	C																					T						C																		T
rs232195218 MGI SNP Detail	Chr16:3546137	Tssr136823 1980 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs262080123 MGI SNP Detail	Chr16:3546210	Tssr136823 1907 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs216627483 MGI SNP Detail	Chr16:3546252	Tssr136823 1865 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs239962876 MGI SNP Detail	Chr16:3546279	Tssr136823 1838 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs260763224 MGI SNP Detail	Chr16:3546362	Tssr136823 1755 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs226056223 MGI SNP Detail	Chr16:3546488	Tssr136823 1629 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs237793004 MGI SNP Detail	Chr16:3546559	Tssr136823 1558 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs249376059 MGI SNP Detail	Chr16:3546565	Tssr136823 1552 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs220107414 MGI SNP Detail	Chr16:3546568	Tssr136823 1549 bp upstream	SNP	A/G	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs238519756 MGI SNP Detail	Chr16:3546605	Tssr136823 1512 bp upstream	SNP	A/G	A	A	A		G	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A	A		A	A	G	A	A	A	A	A	G		G	A	A	A	A	A	A	A	G	A	A	G	G
rs265636717 MGI SNP Detail	Chr16:3546616	Tssr136823 1501 bp upstream	SNP	A/T	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A		A	A	T	A	A	A	A	A			A	A	A	A	A	A	A	A	A	A	A
rs232697188 MGI SNP Detail	Chr16:3546626	Tssr136823 1491 bp upstream	SNP	C/T	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	T	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs248420494 MGI SNP Detail	Chr16:3546651	Tssr136823 1466 bp upstream	SNP	C/T	T	T	T			T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T			T	T	T	T		T	T	T	T	T	C	T	T	T	T	T	T			T	T	T	T	T	T	T	C	T	T	T	T
rs264537543 MGI SNP Detail	Chr16:3546677	Tssr136823 1440 bp upstream	SNP	C/T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs228751441 MGI SNP Detail	Chr16:3546776	Tssr136823 1341 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs219852866 MGI SNP Detail	Chr16:3546783	Tssr136823 1334 bp upstream	SNP	C/T																																T																		C
rs238457365 MGI SNP Detail	Chr16:3546907	Tssr136823 1210 bp upstream	SNP	A/G																																A																		G
rs226286970 MGI SNP Detail	Chr16:3546934	Tssr136823 1183 bp upstream	SNP	C/T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	C	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
rs250755886 MGI SNP Detail	Chr16:3546952	Tssr136823 1165 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs217274797 MGI SNP Detail	Chr16:3547046	Tssr136823 1071 bp upstream	SNP	A/G	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A		A	A	A	A	A
rs237815214 MGI SNP Detail	Chr16:3547082	Tssr136823 1035 bp upstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		G	C	C	C	C
rs579020741 MGI SNP Detail	Chr16:3547148	Tssr136823 969 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs264206849 MGI SNP Detail	Chr16:3547175	Tssr136823 942 bp upstream	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs216706816 MGI SNP Detail	Chr16:3547185	Tssr136823 932 bp upstream	SNP	A/G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs249863611 MGI SNP Detail	Chr16:3547312	Tssr136823 805 bp upstream	SNP	C/T																																T																		C
rs249516712 MGI SNP Detail	Chr16:3547314	Tssr136823 803 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs220038742 MGI SNP Detail	Chr16:3547327	Tssr136823 790 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs245722728 MGI SNP Detail	Chr16:3547338	Tssr136823 779 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C
rs4152077 MGI SNP Detail	Chr16:3547584	Tssr136823 533 bp upstream	SNP	A/G		G			A											G								A		G
rs4152078 MGI SNP Detail	Chr16:3547636	Tssr136823 481 bp upstream	SNP	A/G		G			A			G		G			G			G					A			A		G				G					A					G		A
rs4152079 MGI SNP Detail	Chr16:3547704	Tssr136823 413 bp upstream	SNP	G/T		T			G											T								G		T
rs266241108 MGI SNP Detail	Chr16:3547900	Tssr136823 217 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs228874938 MGI SNP Detail	Chr16:3547972	Tssr136823 145 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs227533972 MGI SNP Detail	Chr16:3548012	Tssr136823 105 bp upstream	SNP	C/G																																C																		G
rs254168235 MGI SNP Detail	Chr16:3548021	Tssr136823 96 bp upstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs226224036 MGI SNP Detail	Chr16:3548026	Tssr136823 91 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs4152080 MGI SNP Detail	Chr16:3548072	Tssr136823 45 bp upstream	SNP	A/G		A		A	G											A										A
rs4152081 MGI SNP Detail	Chr16:3548104	Tssr136823 13 bp upstream	SNP	A/G		G		G	A											G								A		G
rs4152082 MGI SNP Detail	Chr16:3548119	Tssr136823 within coordinates of	SNP	A/G		G		G	A											G										G
rs4152083 MGI SNP Detail	Chr16:3548174	Tssr136823 8 bp downstream	SNP	C/T		C		C	T											C										C
rs247610843 MGI SNP Detail	Chr16:3548234	Tssr136823 68 bp downstream	SNP	A/G																																G																		A
rs32935909 MGI SNP Detail	Chr16:3548654	Tdgf1-ps1 within coordinates of Tssr136823 488 bp downstream	SNP	C/T		C		C	T											C										C						T																		T
rs230591866 MGI SNP Detail	Chr16:3548755	Tdgf1-ps1 within coordinates of Tssr136823 589 bp downstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A	A
rs243380154 MGI SNP Detail	Chr16:3548837	Tdgf1-ps1 within coordinates of Tssr136823 671 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T			T	T	T	T	T	T	T		T	T	T	T
rs581585182 MGI SNP Detail	Chr16:3548890	Tssr136823 724 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs585178263 MGI SNP Detail	Chr16:3548893	Tssr136823 727 bp downstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs579418059 MGI SNP Detail	Chr16:3548934	Tssr136823 768 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T			T	T	T	T	T	T	T	C	T	T	T	T
rs214294180 MGI SNP Detail	Chr16:3548993	Tssr136823 827 bp downstream	SNP	A/C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G			G	G	G	G	G	G	G	C	G	G	G	G
rs585491346 MGI SNP Detail	Chr16:3549028	Tssr136823 862 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs578621786 MGI SNP Detail	Chr16:3549101	Tssr136823 935 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs235922659 MGI SNP Detail	Chr16:3549273	Tssr136823 1107 bp downstream	SNP	C/G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G		G	G	G	T	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs582214676 MGI SNP Detail	Chr16:3549278	Tssr136823 1112 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs585587557 MGI SNP Detail	Chr16:3549579	Tssr136823 1413 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A	A
rs263221143 MGI SNP Detail	Chr16:3549756	Tssr136823 1590 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs224028513 MGI SNP Detail	Chr16:3550065	Tssr136823 1899 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs242652510 MGI SNP Detail	Chr16:3550109	Tssr136823 1943 bp downstream	SNP	A/G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G		T	G	G	G	G	G	G	G	A	G	G	G	G
rs252400403 MGI SNP Detail	Chr16:3550111	Tssr136823 1945 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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