About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr137490
transcription start site region 137490
MGI:6065257

<< first < prev1 next > last >>
Showing SNP(s) 1 - 51 of 51

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260530287
MGI SNP Detail		 Chr16:20511846 Rr512909 within coordinates of
Tssr137490 1921 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221650475
MGI SNP Detail
Alliance Variant		 Chr16:20512202 Cpgi8083 within coordinates of
Fam131a mRNA-UTR
Rr512910 within coordinates of
Tssr137490 1565 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240391931
MGI SNP Detail
Alliance Variant		 Chr16:20512231 Cpgi8083 within coordinates of
Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1536 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259339740
MGI SNP Detail
Alliance Variant		 Chr16:20512297 Cpgi8083 within coordinates of
Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1470 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G G G
rs231355054
MGI SNP Detail
Alliance Variant		 Chr16:20512307 Cpgi8083 within coordinates of
Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1460 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250799007
MGI SNP Detail
Alliance Variant		 Chr16:20512504 Cpgi8083 within coordinates of
Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1263 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264873675
MGI SNP Detail
Alliance Variant		 Chr16:20512654 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1113 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs51694487
MGI SNP Detail
Alliance Variant		 Chr16:20512672 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1095 bp upstream
 SNP C/T T T T T T T T T T C T T C T
rs247756741
MGI SNP Detail
Alliance Variant		 Chr16:20512680 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1087 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216996908
MGI SNP Detail
Alliance Variant		 Chr16:20512686 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1081 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50304600
MGI SNP Detail
Alliance Variant		 Chr16:20512726 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 1041 bp upstream
 SNP C/T C C C C C C C C C C C C T C
rs245493251
MGI SNP Detail
Alliance Variant		 Chr16:20512882 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 885 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214541017
MGI SNP Detail
Alliance Variant		 Chr16:20512885 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 882 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237741164
MGI SNP Detail
Alliance Variant		 Chr16:20512923 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 844 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255974086
MGI SNP Detail
Alliance Variant		 Chr16:20512938 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 829 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs219643020
MGI SNP Detail
Alliance Variant		 Chr16:20512939 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 828 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs236370334
MGI SNP Detail
Alliance Variant		 Chr16:20512987 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 780 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254428322
MGI SNP Detail
Alliance Variant		 Chr16:20512989 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 778 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221815310
MGI SNP Detail
Alliance Variant		 Chr16:20513040 Fam131a Intron
Rr512910 within coordinates of
Tssr137490 727 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47134246
MGI SNP Detail
Alliance Variant		 Chr16:20513211 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 556 bp upstream
 SNP A/G A G A A A A G A A A A G A A G G G
rs265248050
MGI SNP Detail
Alliance Variant		 Chr16:20513221 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 546 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223666955
MGI SNP Detail
Alliance Variant		 Chr16:20513234 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 533 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261985766
MGI SNP Detail
Alliance Variant		 Chr16:20513360 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 407 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50083636
MGI SNP Detail
Alliance Variant		 Chr16:20513450 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 317 bp upstream
 SNP A/T A A A A T A A A A A A A A A A
rs228357672
MGI SNP Detail
Alliance Variant		 Chr16:20513499 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 268 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247510273
MGI SNP Detail
Alliance Variant		 Chr16:20513500 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 267 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs51935946
MGI SNP Detail
Alliance Variant		 Chr16:20513628 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 139 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs227887041
MGI SNP Detail
Alliance Variant		 Chr16:20513636 Fam131a Intron
Rr512911 within coordinates of
Tssr137490 131 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs245531417
MGI SNP Detail
Alliance Variant		 Chr16:20514007 Fam131a Intron
Tssr137490 228 bp downstream
 SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C A C C C C
rs215464621
MGI SNP Detail
Alliance Variant		 Chr16:20514046 Fam131a Intron
Tssr137490 267 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs50630097
MGI SNP Detail
Alliance Variant		 Chr16:20514081 Fam131a Intron
Tssr137490 302 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs253672182
MGI SNP Detail
Alliance Variant		 Chr16:20514182 Fam131a Intron
Tssr137490 403 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs45888418
MGI SNP Detail
Alliance Variant		 Chr16:20514296 Fam131a Intron
Tssr137490 517 bp downstream
 SNP C/G G G G G G G G G G G C G G C G
rs236106324
MGI SNP Detail
Alliance Variant		 Chr16:20514342 Fam131a Intron
Tssr137490 563 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48406046
MGI SNP Detail
Alliance Variant		 Chr16:20514568 Cpgi8084 within coordinates of
Fam131a Coding-Synonymous
Fam131a Intron
Fam131a mRNA-UTR
Tssr137490 789 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs215919216
MGI SNP Detail
Alliance Variant		 Chr16:20514845 Cpgi8084 within coordinates of
Fam131a Intron
Fam131a mRNA-UTR
Tssr137490 1066 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs48573040
MGI SNP Detail
Alliance Variant		 Chr16:20515182 Fam131a Intron
Fam131a mRNA-UTR
Tssr137490 1403 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs257743834
MGI SNP Detail
Alliance Variant		 Chr16:20515183 Fam131a Intron
Fam131a mRNA-UTR
Tssr137490 1404 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221906391
MGI SNP Detail
Alliance Variant		 Chr16:20515219 Fam131a Intron
Tssr137490 1440 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs50449181
MGI SNP Detail
Alliance Variant		 Chr16:20515268 Fam131a Intron
Tssr137490 1489 bp downstream
 SNP C/T C C C C C C C C C T C C T C
rs261684099
MGI SNP Detail
Alliance Variant		 Chr16:20515270 Fam131a Intron
Tssr137490 1491 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218091674
MGI SNP Detail
Alliance Variant		 Chr16:20515362 Fam131a Intron
Tssr137490 1583 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241664215
MGI SNP Detail
Alliance Variant		 Chr16:20515388 Fam131a Intron
Tssr137490 1609 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259047809
MGI SNP Detail
Alliance Variant		 Chr16:20515477 Fam131a Intron
Tssr137490 1698 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs48041999
MGI SNP Detail
Alliance Variant		 Chr16:20515483 Fam131a Intron
Tssr137490 1704 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs248329398
MGI SNP Detail
Alliance Variant		 Chr16:20515587 Fam131a Intron
Tssr137490 1808 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262918628
MGI SNP Detail
Alliance Variant		 Chr16:20515599 Fam131a Intron
Tssr137490 1820 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230593903
MGI SNP Detail
Alliance Variant		 Chr16:20515625 Fam131a Intron
Tssr137490 1846 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46977349
MGI SNP Detail
Alliance Variant		 Chr16:20515639 Fam131a Intron
Tssr137490 1860 bp downstream
 SNP A/G G G G G G A G G G A G G A G
rs211953249
MGI SNP Detail
Alliance Variant		 Chr16:20515707 Fam131a Intron
Tssr137490 1928 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229012277
MGI SNP Detail
Alliance Variant		 Chr16:20515708 Fam131a Intron
Tssr137490 1929 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 51 of 51
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
07/29/2025
MGI 6.24 		The Jackson Laboratory