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Mouse SNP Summary
Symbol
Name
ID 		Tssr137894
transcription start site region 137894
MGI:6065661

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579712146
MGI SNP Detail		 Chr16:31239107 Tssr137894 1999 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583219729
MGI SNP Detail		 Chr16:31239221 Tssr137894 1885 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32529244
MGI SNP Detail		 Chr16:31239549 Tssr137894 1557 bp upstream
 SNP A/G G G G G G G G G G G A G G G G
rs32529246
MGI SNP Detail		 Chr16:31239573 Tssr137894 1533 bp upstream
 SNP C/T T T C C C T T C T C T
rs232779824
MGI SNP Detail		 Chr16:31239692 Tssr137894 1414 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228502853
MGI SNP Detail		 Chr16:31239761 Tssr137894 1345 bp upstream
 SNP C/T T C
rs221937515
MGI SNP Detail		 Chr16:31239821 Tssr137894 1285 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs255455951
MGI SNP Detail		 Chr16:31239846 Tssr137894 1260 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223255448
MGI SNP Detail		 Chr16:31239847 Tssr137894 1259 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243231456
MGI SNP Detail		 Chr16:31240063 Tssr137894 1043 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs265769625
MGI SNP Detail		 Chr16:31240068 Tssr137894 1038 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227481030
MGI SNP Detail		 Chr16:31240241 Tssr137894 865 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs4169041
MGI SNP Detail		 Chr16:31240566 Tssr137894 540 bp upstream
 SNP A/G A G A A G A
rs260831608
MGI SNP Detail		 Chr16:31240661 Tssr137894 445 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs225350011
MGI SNP Detail		 Chr16:31240675 Tssr137894 431 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs253452555
MGI SNP Detail		 Chr16:31240691 Tssr137894 415 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs215166957
MGI SNP Detail		 Chr16:31240808 Tssr137894 298 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs4169042
MGI SNP Detail		 Chr16:31240826 Tssr137894 280 bp upstream
 SNP C/T T C T T C C
rs250365952
MGI SNP Detail		 Chr16:31240914 Tssr137894 192 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232613048
MGI SNP Detail		 Chr16:31240984 Tssr137894 122 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253097746
MGI SNP Detail		 Chr16:31241090 Tssr137893 within coordinates of
Tssr137894 16 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585927983
MGI SNP Detail		 Chr16:31241112 Tssr137894 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs32529247
MGI SNP Detail		 Chr16:31241169 Bdh1 within coordinates of
Tssr137894 43 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs216588425
MGI SNP Detail		 Chr16:31241184 Bdh1 within coordinates of
Tssr137894 58 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs230579358
MGI SNP Detail		 Chr16:31241197 Bdh1 within coordinates of
Tssr137894 71 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260910302
MGI SNP Detail		 Chr16:31241217 Bdh1 within coordinates of
Tssr137894 91 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C C
rs223353068
MGI SNP Detail		 Chr16:31241246 Bdh1 within coordinates of
Tssr137894 120 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246049766
MGI SNP Detail		 Chr16:31241263 Bdh1 within coordinates of
Tssr137894 137 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32529249
MGI SNP Detail		 Chr16:31241317 Bdh1 within coordinates of
Tssr137894 191 bp downstream
 SNP G/T G G G G G G G G T G G G G
rs32529251
MGI SNP Detail		 Chr16:31241339 Bdh1 within coordinates of
Tssr137894 213 bp downstream
 SNP A/G A A A A A A A A A A A G A
rs221178881
MGI SNP Detail		 Chr16:31241353 Bdh1 within coordinates of
Tssr137894 227 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs580286129
MGI SNP Detail		 Chr16:31241363 Bdh1 within coordinates of
Tssr137894 237 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583959680
MGI SNP Detail		 Chr16:31241367 Bdh1 within coordinates of
Tssr137894 241 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242900900
MGI SNP Detail		 Chr16:31241370 Bdh1 within coordinates of
Tssr137894 244 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs587496371
MGI SNP Detail		 Chr16:31241396 Bdh1 within coordinates of
Tssr137894 270 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260765077
MGI SNP Detail		 Chr16:31241406 Bdh1 within coordinates of
Tssr137894 280 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T
rs580801539
MGI SNP Detail		 Chr16:31241420 Bdh1 within coordinates of
Tssr137894 294 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583227631
MGI SNP Detail		 Chr16:31241421 Bdh1 within coordinates of
Tssr137894 295 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225265132
MGI SNP Detail		 Chr16:31241458 Bdh1 within coordinates of
Tssr137894 332 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241544510
MGI SNP Detail		 Chr16:31241598 Bdh1 within coordinates of
Tssr137894 472 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs3723884
MGI SNP Detail		 Chr16:31241611 Bdh1 within coordinates of
Tssr137894 485 bp downstream
 SNP A/G G G A G A
rs230418787
MGI SNP Detail		 Chr16:31241645 Bdh1 within coordinates of
Tssr137894 519 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs254843695
MGI SNP Detail		 Chr16:31241651 Bdh1 within coordinates of
Tssr137894 525 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217604262
MGI SNP Detail		 Chr16:31241730 Bdh1 within coordinates of
Tssr137894 604 bp downstream
 SNP C/G C G
rs236439935
MGI SNP Detail		 Chr16:31241784 Bdh1 within coordinates of
Tssr137894 658 bp downstream
 SNP C/T C T
rs262621408
MGI SNP Detail		 Chr16:31241801 Bdh1 within coordinates of
Tssr137894 675 bp downstream
 SNP G G G
rs216458993
MGI SNP Detail		 Chr16:31241828 Bdh1 within coordinates of
Tssr137894 702 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs237161293
MGI SNP Detail		 Chr16:31241911 Bdh1 within coordinates of
Tssr137894 785 bp downstream
 SNP A/C A A A A C A A A A A A A A A A A C C A A A A A A A A A A C A A A A A A A A A C A A A A C C A C A A A A C A
rs32529253
MGI SNP Detail		 Chr16:31241954 Bdh1 within coordinates of
Tssr137894 828 bp downstream
 SNP A/G A A A A A A A A A A A A G A
rs215120323
MGI SNP Detail		 Chr16:31242037 Bdh1 within coordinates of
Tssr137894 911 bp downstream
 SNP A/C C C C C A C C C C C C C C C C C A A C C C C C C C C C C A C C C C C C C C C A C C C C A A C A C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52393059
MGI SNP Detail		 Chr16:31242046 Bdh1 within coordinates of
Tssr137894 920 bp downstream
 SNP A/G A G G
rs3654367
MGI SNP Detail		 Chr16:31242271 Bdh1 within coordinates of
Tssr137894 1145 bp downstream
 SNP C/G G C G G C C C G C G C G C C C C G
rs221115109
MGI SNP Detail		 Chr16:31242314 Bdh1 within coordinates of
Tssr137894 1188 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236437858
MGI SNP Detail		 Chr16:31242369 Bdh1 within coordinates of
Tssr137894 1243 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254652112
MGI SNP Detail		 Chr16:31242383 Bdh1 within coordinates of
Tssr137894 1257 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs219013621
MGI SNP Detail		 Chr16:31242412 Bdh1 within coordinates of
Tssr137894 1286 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244380667
MGI SNP Detail		 Chr16:31242424 Bdh1 within coordinates of
Tssr137894 1298 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262890152
MGI SNP Detail		 Chr16:31242433 Bdh1 within coordinates of
Tssr137894 1307 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586271569
MGI SNP Detail		 Chr16:31242563 Bdh1 within coordinates of
Tssr137894 1437 bp downstream
 SNP A/G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs4138709
MGI SNP Detail		 Chr16:31242583 Bdh1 within coordinates of
Tssr137894 1457 bp downstream
 SNP G/T G T
rs4138730
MGI SNP Detail		 Chr16:31242585 Bdh1 within coordinates of
Tssr137894 1459 bp downstream
 SNP G/T T G
rs222649649
MGI SNP Detail		 Chr16:31242589 Bdh1 within coordinates of
Tssr137894 1463 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs4138780
MGI SNP Detail		 Chr16:31242613 Bdh1 within coordinates of
Tssr137894 1487 bp downstream
 SNP A/T A T A A
rs257620282
MGI SNP Detail		 Chr16:31242731 Bdh1 within coordinates of
Tssr137894 1605 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs222284488
MGI SNP Detail		 Chr16:31242738 Bdh1 within coordinates of
Tssr137894 1612 bp downstream
 SNP C/T C T
rs226574478
MGI SNP Detail		 Chr16:31242747 Bdh1 within coordinates of
Tssr137894 1621 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242471768
MGI SNP Detail		 Chr16:31242762 Bdh1 within coordinates of
Tssr137894 1636 bp downstream
 SNP C/T T C
rs578924832
MGI SNP Detail		 Chr16:31242801 Bdh1 within coordinates of
Tssr137894 1675 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A A
rs581441175
MGI SNP Detail		 Chr16:31242879 Bdh1 within coordinates of
Tssr137894 1753 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585207086
MGI SNP Detail		 Chr16:31242882 Bdh1 within coordinates of
Tssr137894 1756 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579435006
MGI SNP Detail		 Chr16:31242886 Bdh1 within coordinates of
Tssr137894 1760 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258727859
MGI SNP Detail		 Chr16:31243022 Bdh1 within coordinates of
Tssr137894 1896 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32522165
MGI SNP Detail		 Chr16:31243078 Bdh1 within coordinates of
Tssr137894 1952 bp downstream
 SNP A/G G G G G G G G G G A G G G
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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