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Mouse SNP Summary
Symbol
Name
ID 		Tssr139547
transcription start site region 139547
MGI:6067314

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Showing SNP(s) 1 - 43 of 43

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs47714030
MGI SNP Detail		 Chr16:94224014 Tssr139547 1928 bp upstream
Ttc3 within coordinates of
 SNP C/G G G G G G C G G G G G G G G
rs48056189
MGI SNP Detail		 Chr16:94224072 Tssr139547 1870 bp upstream
Ttc3 within coordinates of
 SNP A/C A A A A A C A A A A A A A A
rs4220486
MGI SNP Detail		 Chr16:94224152 Tssr139547 1790 bp upstream
Ttc3 within coordinates of
 SNP C/T T C C T C
rs48028553
MGI SNP Detail		 Chr16:94224516 Tssr139547 1426 bp upstream
Ttc3 within coordinates of
 SNP A/T A A A A A A A A A T A A T A
rs4220487
MGI SNP Detail		 Chr16:94224667 Tssr139547 1275 bp upstream
Ttc3 within coordinates of
 SNP C/T T C C C T C
rs4220488
MGI SNP Detail		 Chr16:94224706 Tssr139547 1236 bp upstream
Ttc3 within coordinates of
 SNP C/G C C G G G G G G C C C G C G G G C
rs4220489
MGI SNP Detail		 Chr16:94224708 Tssr139547 1234 bp upstream
Ttc3 within coordinates of
 SNP A/T T A A A T A
rs4220490
MGI SNP Detail		 Chr16:94224754 Tssr139547 1188 bp upstream
Ttc3 within coordinates of
 SNP C/T C T T T C T
rs49411928
MGI SNP Detail		 Chr16:94224855 Tssr139547 1087 bp upstream
Ttc3 within coordinates of
 SNP A/C C C C C C A C C C C C C C C
rs4220491
MGI SNP Detail		 Chr16:94225026 Tssr139547 916 bp upstream
Ttc3 within coordinates of
 SNP C/T C C T T T T T C T C C C T C T T T C
rs51600274
MGI SNP Detail		 Chr16:94225108 Tssr139547 834 bp upstream
Ttc3 within coordinates of
 SNP C/T C C C C C C C C T C C T C
rs4220492
MGI SNP Detail		 Chr16:94225271 Tssr139547 671 bp upstream
Ttc3 within coordinates of
 SNP C/T T T C C C C C C T C T T T C T C C C T
rs49270439
MGI SNP Detail		 Chr16:94225348 Tssr139547 594 bp upstream
Ttc3 within coordinates of
 SNP C/T T T T T C T T T T
rs4220493
MGI SNP Detail		 Chr16:94225593 Tssr139547 349 bp upstream
Ttc3 within coordinates of
 SNP C/T T C C C T C
rs47553766
MGI SNP Detail		 Chr16:94225816 Tssr139547 126 bp upstream
Ttc3 within coordinates of
 SNP A/G G A A A A G A G G G A A A A G
rs48814081
MGI SNP Detail		 Chr16:94226085 Tssr139547 119 bp downstream
Ttc3 within coordinates of
 SNP A/G A G G A G
rs50837391
MGI SNP Detail		 Chr16:94226093 Tssr139547 127 bp downstream
Ttc3 within coordinates of
 SNP C/T T C C T C
rs48444183
MGI SNP Detail		 Chr16:94226168 Tssr139547 202 bp downstream
Ttc3 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs48943916
MGI SNP Detail		 Chr16:94226178 Tssr139547 212 bp downstream
Ttc3 within coordinates of
 SNP A/G A A G G G G G G A A A G A G G A
rs45651171
MGI SNP Detail		 Chr16:94226198 Tssr139547 232 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C T C C C C C C C C
rs47346119
MGI SNP Detail		 Chr16:94226216 Tssr139547 250 bp downstream
Ttc3 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs48998884
MGI SNP Detail		 Chr16:94226290 Tssr139547 324 bp downstream
Ttc3 within coordinates of
 SNP A/G A A G G G G G A A A G A G G G A
rs51718572
MGI SNP Detail		 Chr16:94226335 Tssr139547 369 bp downstream
Ttc3 within coordinates of
 SNP C/G G G G G G G G G G C G G C G
rs48048514
MGI SNP Detail		 Chr16:94226382 Tssr139547 416 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs253695142
MGI SNP Detail		 Chr16:94226419 Tssr139547 453 bp downstream
Ttc3 within coordinates of
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs51073031
MGI SNP Detail		 Chr16:94226440 Tssr139547 474 bp downstream
Ttc3 within coordinates of
 SNP A/G A A A A G A A G
rs49429308
MGI SNP Detail		 Chr16:94226589 Tssr139547 623 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs46938102
MGI SNP Detail		 Chr16:94226610 Tssr139547 644 bp downstream
Ttc3 within coordinates of
 SNP A/G A A A A A G A A A G A A G A
rs49049297
MGI SNP Detail		 Chr16:94226710 Tssr139547 744 bp downstream
Ttc3 within coordinates of
 SNP C/G G G G G G C G G G C G G C G
rs46032531
MGI SNP Detail		 Chr16:94226893 Tssr139547 927 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C C C C C C C C T C
rs4220494
MGI SNP Detail		 Chr16:94226914 Tssr139547 948 bp downstream
Ttc3 within coordinates of
 SNP G/T T T G G G G G G G T T G G G G G
rs4220495
MGI SNP Detail		 Chr16:94227123 Tssr139547 1157 bp downstream
Ttc3 within coordinates of
 SNP A/G G G A A A G A
rs4220496
MGI SNP Detail		 Chr16:94227127 Tssr139547 1161 bp downstream
Ttc3 within coordinates of
 SNP C/T C C T T T C T
rs51702025
MGI SNP Detail		 Chr16:94227166 Tssr139547 1200 bp downstream
Ttc3 within coordinates of
 SNP A/C A A A A A A C A A A A A A A A
rs50319922
MGI SNP Detail		 Chr16:94227202 Tssr139547 1236 bp downstream
Ttc3 within coordinates of
 SNP A/G A A A A A G A A A A A A
rs48029500
MGI SNP Detail		 Chr16:94227233 Tssr139547 1267 bp downstream
Ttc3 within coordinates of
 SNP C/G C C C C C G C C C C C C
rs49131501
MGI SNP Detail		 Chr16:94227418 Tssr139547 1452 bp downstream
Ttc3 within coordinates of
 SNP A/C C C C C C C A C C C A C C A C
rs46477681
MGI SNP Detail		 Chr16:94227530 Tssr139547 1564 bp downstream
Ttc3 within coordinates of
 SNP G/T G G G G G G G G G T G G T G
rs47976514
MGI SNP Detail		 Chr16:94227544 Tssr139547 1578 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C T C C C C C C C C
rs46288461
MGI SNP Detail		 Chr16:94227555 Tssr139547 1589 bp downstream
Ttc3 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs46358882
MGI SNP Detail		 Chr16:94227597 Tssr139547 1631 bp downstream
Ttc3 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs50066615
MGI SNP Detail		 Chr16:94227901 Tssr139547 1935 bp downstream
Ttc3 within coordinates of
 SNP A/T T T A A A A A T T T T T A T A T
rs46824793
MGI SNP Detail		 Chr16:94227925 Tssr139547 1959 bp downstream
Ttc3 within coordinates of
 SNP A/G A A A A A G A A A A A A A A
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Showing SNP(s) 1 - 43 of 43
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory