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Mouse SNP Summary
Symbol
Name
ID 		Tssr139897
transcription start site region 139897
MGI:6067664

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228697394
MGI SNP Detail		 Chr16:9811181 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1998 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248970574
MGI SNP Detail		 Chr16:9811198 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1981 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs212343449
MGI SNP Detail		 Chr16:9811211 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1968 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs4160624
MGI SNP Detail		 Chr16:9811274 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1905 bp downstream
 SNP C/T C C C T T T T C T T T C T T C T
rs251088088
MGI SNP Detail		 Chr16:9811395 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1784 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215604091
MGI SNP Detail		 Chr16:9811469 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1710 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233169901
MGI SNP Detail		 Chr16:9811633 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1546 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251688196
MGI SNP Detail		 Chr16:9811913 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1266 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221744885
MGI SNP Detail		 Chr16:9812094 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1085 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235006484
MGI SNP Detail		 Chr16:9812166 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1013 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247915871
MGI SNP Detail		 Chr16:9812179 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 1000 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221328430
MGI SNP Detail		 Chr16:9812313 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 866 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245777469
MGI SNP Detail		 Chr16:9812326 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 853 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262776849
MGI SNP Detail		 Chr16:9812469 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 710 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224207922
MGI SNP Detail		 Chr16:9812753 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 426 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578985877
MGI SNP Detail		 Chr16:9812919 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139895 within coordinates of
Tssr139897 260 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs241229351
MGI SNP Detail		 Chr16:9813000 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 179 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G G
rs260039011
MGI SNP Detail		 Chr16:9813019 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 160 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs228586483
MGI SNP Detail		 Chr16:9813035 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 144 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248980731
MGI SNP Detail		 Chr16:9813055 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 124 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264687332
MGI SNP Detail		 Chr16:9813065 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 114 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51306796
MGI SNP Detail		 Chr16:9813089 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 90 bp downstream
 SNP A/G G G G G G G A G G G A G G A G
rs255645482
MGI SNP Detail		 Chr16:9813289 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 82 bp upstream
Tssr139900 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs215053248
MGI SNP Detail		 Chr16:9813300 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 93 bp upstream
Tssr139900 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233225862
MGI SNP Detail		 Chr16:9813325 Cpgi7945 within coordinates of
Grin2a within coordinates of
Tssr139897 118 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46010191
MGI SNP Detail		 Chr16:9813633 Cpgi7945 within coordinates of
Tssr139897 426 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs216368797
MGI SNP Detail		 Chr16:9813648 Cpgi7945 within coordinates of
Tssr139897 441 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs52362867
MGI SNP Detail		 Chr16:9813832 Cpgi7945 within coordinates of
Tssr139897 625 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs255301475
MGI SNP Detail		 Chr16:9813845 Cpgi7945 within coordinates of
Tssr139897 638 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51483879
MGI SNP Detail		 Chr16:9813865 Cpgi7945 within coordinates of
Tssr139897 658 bp upstream
 SNP G/T G G G G G G G G G G T G G T G
rs235941912
MGI SNP Detail		 Chr16:9813912 Tssr139897 705 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262404393
MGI SNP Detail		 Chr16:9814011 Tssr139897 804 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224070363
MGI SNP Detail		 Chr16:9814030 Tssr139897 823 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs582992571
MGI SNP Detail		 Chr16:9814136 Tssr139897 929 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs586404581
MGI SNP Detail		 Chr16:9814178 Tssr139897 971 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241279972
MGI SNP Detail		 Chr16:9814186 Tssr139897 979 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs260579461
MGI SNP Detail		 Chr16:9814365 Tssr139897 1158 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs222761368
MGI SNP Detail		 Chr16:9814494 Tssr139897 1287 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242806460
MGI SNP Detail		 Chr16:9814636 Tssr139897 1429 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261544641
MGI SNP Detail		 Chr16:9814682 Tssr139897 1475 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229493222
MGI SNP Detail		 Chr16:9814858 Tssr139897 1651 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs250869711
MGI SNP Detail		 Chr16:9814893 Tssr139897 1686 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs265374729
MGI SNP Detail		 Chr16:9814957 Tssr139897 1750 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs227040042
MGI SNP Detail		 Chr16:9815021 Tssr139897 1814 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs246324232
MGI SNP Detail		 Chr16:9815027 Tssr139897 1820 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs216977533
MGI SNP Detail		 Chr16:9815032 Tssr139897 1825 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs228956927
MGI SNP Detail		 Chr16:9815102 Gm30668 within coordinates of
Tssr139897 1895 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs252063265
MGI SNP Detail		 Chr16:9815103 Gm30668 within coordinates of
Tssr139897 1896 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212485958
MGI SNP Detail		 Chr16:9815104 Gm30668 within coordinates of
Tssr139897 1897 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237832598
MGI SNP Detail		 Chr16:9815122 Gm30668 within coordinates of
Tssr139897 1915 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257638895
MGI SNP Detail		 Chr16:9815148 Gm30668 within coordinates of
Tssr139897 1941 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs215066615
MGI SNP Detail		 Chr16:9815162 Gm30668 within coordinates of
Tssr139897 1955 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234613904
MGI SNP Detail		 Chr16:9815168 Gm30668 within coordinates of
Tssr139897 1961 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 53 of 53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory