About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr140578
transcription start site region 140578
MGI:6068345

<< first < prev1 next > last >>
Showing SNP(s) 1 - 42 of 42

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239861896
MGI SNP Detail		 Chr16:23805512 Bcl6 within coordinates of
Rr325128 within coordinates of
Tssr140578 1801 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251825993
MGI SNP Detail		 Chr16:23805752 Bcl6 within coordinates of
Cpgi8125 within coordinates of
Rr325128 within coordinates of
Tssr140578 1561 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs219251033
MGI SNP Detail		 Chr16:23805935 Bcl6 within coordinates of
Cpgi8125 within coordinates of
Rr325128 within coordinates of
Tssr140578 1378 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232126514
MGI SNP Detail		 Chr16:23806099 Bcl6 within coordinates of
Cpgi8125 within coordinates of
Rr325128 within coordinates of
Tssr140578 1214 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T G T
rs248116271
MGI SNP Detail		 Chr16:23806100 Bcl6 within coordinates of
Cpgi8125 within coordinates of
Rr325128 within coordinates of
Tssr140578 1213 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T A A A A A A T A A A A A A A T A A T A
rs221192174
MGI SNP Detail		 Chr16:23806101 Bcl6 within coordinates of
Cpgi8125 within coordinates of
Rr325128 within coordinates of
Tssr140578 1212 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C T
rs247524842
MGI SNP Detail		 Chr16:23806176 Bcl6 within coordinates of
Rr325128 within coordinates of
Tssr140578 1137 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs266198037
MGI SNP Detail		 Chr16:23806216 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 1097 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs224358386
MGI SNP Detail		 Chr16:23806251 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 1062 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581492228
MGI SNP Detail		 Chr16:23806345 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 968 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs249510094
MGI SNP Detail		 Chr16:23806457 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 856 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257837448
MGI SNP Detail		 Chr16:23806687 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 626 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C C
rs584961805
MGI SNP Detail		 Chr16:23806700 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 613 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C C
rs226788280
MGI SNP Detail		 Chr16:23806769 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 544 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs237645882
MGI SNP Detail		 Chr16:23806883 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 430 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581485100
MGI SNP Detail		 Chr16:23807032 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 281 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584987776
MGI SNP Detail		 Chr16:23807041 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 272 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6281522
MGI SNP Detail		 Chr16:23807494 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 170 bp upstream
 SNP A/G G A
rs228902808
MGI SNP Detail		 Chr16:23807531 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 207 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6281669
MGI SNP Detail		 Chr16:23807583 Bcl6 within coordinates of
Cpgi8126 within coordinates of
Rr325128 within coordinates of
Tssr140578 259 bp upstream
 SNP A/C A C
rs218846739
MGI SNP Detail		 Chr16:23807750 Cpgi8126 within coordinates of
Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr137735 within coordinates of
Tssr140578 426 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G A
rs231468148
MGI SNP Detail		 Chr16:23807781 Cpgi8126 within coordinates of
Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 457 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578567944
MGI SNP Detail		 Chr16:23808086 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 762 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245747766
MGI SNP Detail		 Chr16:23808121 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 797 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs213541332
MGI SNP Detail		 Chr16:23808234 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 910 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231979374
MGI SNP Detail		 Chr16:23808253 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 929 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T
rs248187704
MGI SNP Detail		 Chr16:23808274 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 950 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T T T T T T T T T T T T T T
rs212796875
MGI SNP Detail		 Chr16:23808277 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 953 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260924376
MGI SNP Detail		 Chr16:23808364 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1040 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224253392
MGI SNP Detail		 Chr16:23808388 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1064 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241428465
MGI SNP Detail		 Chr16:23808467 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1143 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251337617
MGI SNP Detail		 Chr16:23808495 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1171 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220545485
MGI SNP Detail		 Chr16:23808512 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1188 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs237522599
MGI SNP Detail		 Chr16:23808522 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1198 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs257170761
MGI SNP Detail		 Chr16:23808534 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1210 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233447684
MGI SNP Detail		 Chr16:23808635 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1311 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251829264
MGI SNP Detail		 Chr16:23808757 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1433 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264268611
MGI SNP Detail		 Chr16:23808787 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1463 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231689458
MGI SNP Detail		 Chr16:23808923 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1599 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245782320
MGI SNP Detail		 Chr16:23809233 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1909 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213443498
MGI SNP Detail		 Chr16:23809304 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1980 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs226002626
MGI SNP Detail		 Chr16:23809313 Gm49518 within coordinates of
Rr325128 within coordinates of
Tssr140578 1989 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 42 of 42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory