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Mouse SNP Summary
Symbol
Name
ID 		Tssr141134
transcription start site region 141134
MGI:6068901

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222488700
MGI SNP Detail		 Chr16:42159072 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1886 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51953640
MGI SNP Detail		 Chr16:42159170 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1788 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs387086257
MGI SNP Detail		 Chr16:42159255 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1703 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C A C C A C C C C C A A C C C C C C C A C C
rs244407195
MGI SNP Detail		 Chr16:42159348 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1610 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49062589
MGI SNP Detail		 Chr16:42159350 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1608 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs221717733
MGI SNP Detail		 Chr16:42159394 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1564 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs259980897
MGI SNP Detail		 Chr16:42159416 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1542 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227688740
MGI SNP Detail		 Chr16:42159421 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1537 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs254414531
MGI SNP Detail		 Chr16:42159422 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1536 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs50968818
MGI SNP Detail		 Chr16:42159603 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1355 bp downstream
 SNP G/T G G G G G G T G G G T G G T G
rs230065622
MGI SNP Detail		 Chr16:42159628 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1330 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245655596
MGI SNP Detail		 Chr16:42159725 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1233 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215043244
MGI SNP Detail		 Chr16:42159778 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1180 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234789732
MGI SNP Detail		 Chr16:42159807 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1151 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247949024
MGI SNP Detail		 Chr16:42159907 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 1051 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs218722422
MGI SNP Detail		 Chr16:42159988 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 970 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46981412
MGI SNP Detail		 Chr16:42160044 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 914 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs47968659
MGI SNP Detail		 Chr16:42160143 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 815 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs222385925
MGI SNP Detail		 Chr16:42160157 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 801 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238816145
MGI SNP Detail		 Chr16:42160165 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 793 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251502826
MGI SNP Detail		 Chr16:42160173 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 785 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221612445
MGI SNP Detail		 Chr16:42160177 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 781 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241182005
MGI SNP Detail		 Chr16:42160196 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 762 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260217183
MGI SNP Detail		 Chr16:42160213 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 745 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220208317
MGI SNP Detail		 Chr16:42160237 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 721 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50228036
MGI SNP Detail		 Chr16:42160362 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 596 bp downstream
 SNP A/G G G G G G G A G G G A G G A G
rs265088632
MGI SNP Detail		 Chr16:42160429 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 529 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231102852
MGI SNP Detail		 Chr16:42160431 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 527 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs582984268
MGI SNP Detail		 Chr16:42160455 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 503 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246656866
MGI SNP Detail		 Chr16:42160561 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 397 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs258989050
MGI SNP Detail		 Chr16:42160640 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 318 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs4179076
MGI SNP Detail		 Chr16:42160749 Gap43 within coordinates of
Rr325319 within coordinates of
Tssr141134 209 bp downstream
 SNP A/T A T T T A
rs586394580
MGI SNP Detail		 Chr16:42161297 Rr325319 within coordinates of
Tssr141134 304 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247986266
MGI SNP Detail		 Chr16:42161346 Rr325319 within coordinates of
Tssr141134 353 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219103019
MGI SNP Detail		 Chr16:42161376 Rr325319 within coordinates of
Tssr141134 383 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236183024
MGI SNP Detail		 Chr16:42161453 Rr325319 within coordinates of
Tssr141134 460 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48198747
MGI SNP Detail		 Chr16:42161526 Rr325319 within coordinates of
Tssr141134 533 bp upstream
 SNP C/T T T T T T T T T T T C T T C T
rs213791979
MGI SNP Detail		 Chr16:42161546 Rr325319 within coordinates of
Tssr141134 553 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231961046
MGI SNP Detail		 Chr16:42161601 Rr325319 within coordinates of
Tssr141134 608 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47399339
MGI SNP Detail		 Chr16:42161617 Rr325319 within coordinates of
Tssr141134 624 bp upstream
 SNP C/G C C C C C C G C C C G C C G C
rs221633847
MGI SNP Detail		 Chr16:42161659 Rr325319 within coordinates of
Tssr141134 666 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50887567
MGI SNP Detail		 Chr16:42161689 Rr325319 within coordinates of
Tssr141134 696 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs48513793
MGI SNP Detail		 Chr16:42161760 Rr325319 within coordinates of
Tssr141134 767 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs579126328
MGI SNP Detail		 Chr16:42161783 Rr325319 within coordinates of
Tssr141134 790 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582623193
MGI SNP Detail		 Chr16:42161814 Tssr141134 821 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585926035
MGI SNP Detail		 Chr16:42161816 Tssr141134 823 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220971758
MGI SNP Detail		 Chr16:42161831 Tssr141134 838 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245463538
MGI SNP Detail		 Chr16:42161866 Tssr141134 873 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs50638912
MGI SNP Detail		 Chr16:42161905 Tssr141134 912 bp upstream
 SNP G/T G G G G G G G G G G T G G T G
rs223194816
MGI SNP Detail		 Chr16:42161999 Tssr141134 1006 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240715121
MGI SNP Detail		 Chr16:42162026 Tssr141134 1033 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579893159
MGI SNP Detail		 Chr16:42162098 Tssr141134 1105 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583300564
MGI SNP Detail		 Chr16:42162105 Tssr141134 1112 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260052503
MGI SNP Detail		 Chr16:42162106 Tssr141134 1113 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228009161
MGI SNP Detail		 Chr16:42162227 Tssr141134 1234 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241920348
MGI SNP Detail		 Chr16:42162232 Tssr141134 1239 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs266104290
MGI SNP Detail		 Chr16:42162412 Tssr141134 1419 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50606924
MGI SNP Detail		 Chr16:42162448 Tssr141134 1455 bp upstream
 SNP A/C C C C C C C A C C C C C C C C
rs254145738
MGI SNP Detail		 Chr16:42162455 Tssr141134 1462 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213374835
MGI SNP Detail		 Chr16:42162544 Tssr141134 1551 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225775316
MGI SNP Detail		 Chr16:42162545 Tssr141134 1552 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50116572
MGI SNP Detail		 Chr16:42162547 Tssr141134 1554 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
rs215672318
MGI SNP Detail		 Chr16:42162573 Tssr141134 1580 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585287077
MGI SNP Detail		 Chr16:42162608 Tssr141134 1615 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
rs234073074
MGI SNP Detail		 Chr16:42162728 Tssr141134 1735 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261133569
MGI SNP Detail		 Chr16:42162733 Tssr141134 1740 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212573636
MGI SNP Detail		 Chr16:42162783 Tssr141134 1790 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235812495
MGI SNP Detail		 Chr16:42162851 Tssr141134 1858 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579566635
MGI SNP Detail		 Chr16:42162864 Tssr141134 1871 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262197084
MGI SNP Detail		 Chr16:42162902 Tssr141134 1909 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs220349541
MGI SNP Detail		 Chr16:42162911 Tssr141134 1918 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48582677
MGI SNP Detail		 Chr16:42162955 Tssr141134 1962 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs253673435
MGI SNP Detail		 Chr16:42162971 Tssr141134 1978 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory