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Mouse SNP Summary
Symbol
Name
ID 		Tssr141230
transcription start site region 141230
MGI:6068997

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48276501
MGI SNP Detail		 Chr16:45201517 Tssr141230 1962 bp downstream
 SNP T T T T T T
rs386914679
MGI SNP Detail		 Chr16:45201533 Tssr141230 1946 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T T T T T C C T T
rs49906159
MGI SNP Detail		 Chr16:45201633 Tssr141230 1846 bp downstream
 SNP A A A A A A
rs50927853
MGI SNP Detail		 Chr16:45201643 Tssr141230 1836 bp downstream
 SNP A/G G A A G
rs50042095
MGI SNP Detail		 Chr16:45201668 Tssr141230 1811 bp downstream
 SNP A/G G A A A G
rs48886978
MGI SNP Detail		 Chr16:45201744 Tssr141230 1735 bp downstream
 SNP C/T C T T T C
rs49135568
MGI SNP Detail		 Chr16:45201794 Tssr141230 1685 bp downstream
 SNP G/T G T T T G
rs46490173
MGI SNP Detail		 Chr16:45201883 Tssr141230 1596 bp downstream
 SNP C/T C T T T C
rs238539278
MGI SNP Detail		 Chr16:45201884 Tssr141230 1595 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47869143
MGI SNP Detail		 Chr16:45201937 Tssr141230 1542 bp downstream
 SNP C/T C T T T C
rs50839511
MGI SNP Detail		 Chr16:45201960 Tssr141230 1519 bp downstream
 SNP A/G A G G G A
rs49306119
MGI SNP Detail		 Chr16:45201968 Tssr141230 1511 bp downstream
 SNP C/T T C C C T
rs49923180
MGI SNP Detail		 Chr16:45202039 Tssr141230 1440 bp downstream
 SNP C/T C T T T C
rs48520769
MGI SNP Detail		 Chr16:45202052 Tssr141230 1427 bp downstream
 SNP A A A A A A
rs48554942
MGI SNP Detail		 Chr16:45202076 Tssr141230 1403 bp downstream
 SNP T T T T T T
rs212198509
MGI SNP Detail		 Chr16:45202078 Tssr141230 1401 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49186277
MGI SNP Detail		 Chr16:45202117 Tssr141230 1362 bp downstream
 SNP G/T G T T T G
rs49616175
MGI SNP Detail		 Chr16:45202119 Tssr141230 1360 bp downstream
 SNP A A A A A A
rs214504148
MGI SNP Detail		 Chr16:45202202 Tssr141230 1277 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46537640
MGI SNP Detail		 Chr16:45202234 Tssr141230 1245 bp downstream
 SNP C/T C T T T C
rs47450492
MGI SNP Detail		 Chr16:45202261 Tssr141230 1218 bp downstream
 SNP A/G G A A A G
rs49826832
MGI SNP Detail		 Chr16:45202265 Tssr141230 1214 bp downstream
 SNP C/T T T T C
rs48545306
MGI SNP Detail		 Chr16:45202299 Tssr141230 1180 bp downstream
 SNP A/G A G G G A
rs32756337
MGI SNP Detail		 Chr16:45202318 Tssr141230 1161 bp downstream
 SNP A/T A T A T T T A T T A T A
rs218674769
MGI SNP Detail		 Chr16:45202445 Tssr141230 1034 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32756339
MGI SNP Detail		 Chr16:45202464 Tssr141230 1015 bp downstream
 SNP C/T T T C T C C C T C C T C T
rs217909657
MGI SNP Detail		 Chr16:45202648 Cd200 within coordinates of
Tssr141230 831 bp downstream
 SNP A/G G A
rs236380050
MGI SNP Detail		 Chr16:45202763 Cd200 within coordinates of
Tssr141230 716 bp downstream
 SNP A/G G A
rs387276925
MGI SNP Detail		 Chr16:45202764 Cd200 within coordinates of
Tssr141230 715 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C C C C C A A C C
rs220753934
MGI SNP Detail		 Chr16:45202765 Cd200 within coordinates of
Tssr141230 714 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265826214
MGI SNP Detail		 Chr16:45202839 Cd200 within coordinates of
Tssr141230 640 bp downstream
 SNP A/G G A
rs584415406
MGI SNP Detail		 Chr16:45202907 Cd200 within coordinates of
Tssr141230 572 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32756341
MGI SNP Detail		 Chr16:45202943 Cd200 within coordinates of
Tssr141230 536 bp downstream
 SNP A/G G G G G A ? G A G G
rs226939073
MGI SNP Detail		 Chr16:45203121 Cd200 within coordinates of
Tssr141223 within coordinates of
Tssr141230 358 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C C C C A A A C C
rs241026413
MGI SNP Detail		 Chr16:45203486 Cd200 within coordinates of
Tssr141230 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T T T T C C C T T
rs32756343
MGI SNP Detail		 Chr16:45203493 Cd200 within coordinates of
Tssr141230 4 bp upstream
 SNP A/G G G A A A G A G G
rs224557955
MGI SNP Detail		 Chr16:45203508 Cd200 within coordinates of
Tssr141230 19 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387805296
MGI SNP Detail		 Chr16:45203582 Cd200 within coordinates of
Tssr141230 93 bp upstream
Tssr141231 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T C
rs263792906
MGI SNP Detail		 Chr16:45203684 Cd200 within coordinates of
Tssr141230 195 bp upstream
 SNP C/T C T
rs32756895
MGI SNP Detail		 Chr16:45203696 Cd200 within coordinates of
Tssr141230 207 bp upstream
 SNP C/T C C T T C T C T C
rs32756896
MGI SNP Detail		 Chr16:45203813 Cd200 within coordinates of
Tssr141230 324 bp upstream
 SNP C/T C C T C C T C C
rs32756897
MGI SNP Detail		 Chr16:45203909 Cd200 within coordinates of
Tssr141230 420 bp upstream
 SNP C/T C C C T C C C T C C
rs52719447
MGI SNP Detail		 Chr16:45203986 Cd200 within coordinates of
Tssr141230 497 bp upstream
 SNP G G
rs52719449
MGI SNP Detail		 Chr16:45203988 Cd200 within coordinates of
Tssr141230 499 bp upstream
 SNP G G
rs387734145
MGI SNP Detail		 Chr16:45204077 Cd200 within coordinates of
Tssr141230 588 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G G G G A G G
rs4181016
MGI SNP Detail		 Chr16:45204086 Cd200 within coordinates of
Tssr141230 597 bp upstream
 SNP A/G A G G G A
rs213185580
MGI SNP Detail		 Chr16:45204109 Cd200 within coordinates of
Tssr141230 620 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231385298
MGI SNP Detail		 Chr16:45204122 Cd200 within coordinates of
Tssr141230 633 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251834023
MGI SNP Detail		 Chr16:45204156 Cd200 within coordinates of
Tssr141230 667 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs387201774
MGI SNP Detail		 Chr16:45204230 Cd200 within coordinates of
Tssr141230 741 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C C C C C T T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220720257
MGI SNP Detail		 Chr16:45204344 Cd200 within coordinates of
Tssr141230 855 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238359271
MGI SNP Detail		 Chr16:45204386 Cd200 within coordinates of
Tssr141230 897 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs50230324
MGI SNP Detail		 Chr16:45204457 Cd200 within coordinates of
Tssr141230 968 bp upstream
 SNP T T T T T T
rs226701632
MGI SNP Detail		 Chr16:45204531 Cd200 within coordinates of
Tssr141230 1042 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G G G G G G G G G G G G T T T G G
rs244019194
MGI SNP Detail		 Chr16:45204702 Cd200 within coordinates of
Tssr141230 1213 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G G G G G G G G G G G G T T T G G
rs387297265
MGI SNP Detail		 Chr16:45204751 Cd200 within coordinates of
Tssr141230 1262 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A A A A A G G A A
rs254500230
MGI SNP Detail		 Chr16:45204754 Cd200 within coordinates of
Tssr141230 1265 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A A A A G G G A A
rs387108261
MGI SNP Detail		 Chr16:45204766 Cd200 within coordinates of
Tssr141230 1277 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G G G G A A G G
rs219311441
MGI SNP Detail		 Chr16:45204914 Cd200 within coordinates of
Tssr141230 1425 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T T T T C C C T T
rs237756402
MGI SNP Detail		 Chr16:45204949 Cd200 within coordinates of
Tssr141230 1460 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T T T T C C C T T
rs256523004
MGI SNP Detail		 Chr16:45204959 Cd200 within coordinates of
Tssr141230 1470 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226875558
MGI SNP Detail		 Chr16:45204967 Cd200 within coordinates of
Tssr141230 1478 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A A A A A A C C C A A
rs253257334
MGI SNP Detail		 Chr16:45204972 Cd200 within coordinates of
Tssr141230 1483 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs266015936
MGI SNP Detail		 Chr16:45205033 Cd200 within coordinates of
Tssr141230 1544 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A A A A G G G A A
rs234205620
MGI SNP Detail		 Chr16:45205056 Cd200 within coordinates of
Tssr141230 1567 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs387056068
MGI SNP Detail		 Chr16:45205078 Cd200 within coordinates of
Tssr141230 1589 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G G G G A A G G
rs253445720
MGI SNP Detail		 Chr16:45205113 Cd200 within coordinates of
Tssr141230 1624 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G G G G G G G G G G T T T G G
rs581874164
MGI SNP Detail		 Chr16:45205340 Cd200 within coordinates of
Tssr141230 1851 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C C C C T T C C
rs585534783
MGI SNP Detail		 Chr16:45205342 Cd200 within coordinates of
Tssr141230 1853 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C C C C T T C C
rs213140986
MGI SNP Detail		 Chr16:45205361 Cd200 within coordinates of
Tssr141230 1872 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A A A A A A C C C A A
rs232180885
MGI SNP Detail		 Chr16:45205400 Cd200 within coordinates of
Tssr141230 1911 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs245484613
MGI SNP Detail		 Chr16:45205472 Cd200 within coordinates of
Tssr141230 1983 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T T T T C C C T T
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Showing SNP(s) 1 - 72 of 72
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory