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Mouse SNP Summary
Symbol
Name
ID 		Tssr141617
transcription start site region 141617
MGI:6069384

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223330960
MGI SNP Detail		 Chr16:58317750 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1995 bp downstream
 SNP A/C A C
rs240517274
MGI SNP Detail		 Chr16:58317798 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1947 bp downstream
 SNP A/G G A
rs251682021
MGI SNP Detail		 Chr16:58317801 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1944 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T C T T T T C T T T T T C T T T T C T T T T T C T T C T T T T T
rs263361356
MGI SNP Detail		 Chr16:58317802 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1943 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G A G G G G A G G G G G A G G G G A G G G G G A G G A G G G G G
rs221677831
MGI SNP Detail		 Chr16:58317812 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1933 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G A G G G G A G G G G G A G G G G A G G G G G A G G A G G G G G
rs237701173
MGI SNP Detail		 Chr16:58317820 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1925 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G G A G A A A A G A A A A A G A A A A G A A A A A G A A G G A A A A
rs256370054
MGI SNP Detail		 Chr16:58317823 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1922 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223667158
MGI SNP Detail		 Chr16:58317824 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1921 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs250094287
MGI SNP Detail		 Chr16:58317834 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1911 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265958621
MGI SNP Detail		 Chr16:58317844 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1901 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259935816
MGI SNP Detail		 Chr16:58317852 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1893 bp downstream
 SNP G/T G T
rs260012938
MGI SNP Detail		 Chr16:58317892 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1853 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs215203849
MGI SNP Detail		 Chr16:58317914 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1831 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230155708
MGI SNP Detail		 Chr16:58317938 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1807 bp downstream
 SNP C/T C T
rs243285804
MGI SNP Detail		 Chr16:58317939 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1806 bp downstream
 SNP G/T T G
rs214108874
MGI SNP Detail		 Chr16:58317959 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1786 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A G A A A A G A A A A A G A A A A G A A A A A G A A G G A A A A
rs235824858
MGI SNP Detail		 Chr16:58317962 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1783 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265294979
MGI SNP Detail		 Chr16:58317979 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1766 bp downstream
 SNP A/G A G
rs227893045
MGI SNP Detail		 Chr16:58317987 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1758 bp downstream
 SNP C/G C G
rs240645078
MGI SNP Detail		 Chr16:58318015 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1730 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251480072
MGI SNP Detail		 Chr16:58318051 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1694 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs586860487
MGI SNP Detail		 Chr16:58318053 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1692 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C A C A C C C C A C C C C C A C C C C A C C C C C A C C A C C C C C
rs221706497
MGI SNP Detail		 Chr16:58318062 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1683 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs46711633
MGI SNP Detail		 Chr16:58318073 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1672 bp downstream
 SNP A/G A A A A A A A A A A G A G A G A
rs250810288
MGI SNP Detail		 Chr16:58318110 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1635 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49693147
MGI SNP Detail		 Chr16:58318116 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1629 bp downstream
 SNP A/T A A A A A A A A A A A A T A
rs47947483
MGI SNP Detail		 Chr16:58318154 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1591 bp downstream
 SNP A/G A A A A A A A A A A A G A G G G A
rs264129813
MGI SNP Detail		 Chr16:58318216 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1529 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235149362
MGI SNP Detail		 Chr16:58318234 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1511 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248230328
MGI SNP Detail		 Chr16:58318248 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1497 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258953655
MGI SNP Detail		 Chr16:58318249 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1496 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46032955
MGI SNP Detail		 Chr16:58318283 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1462 bp downstream
 SNP A/C C C C C C C C C C C C C A C
rs244996311
MGI SNP Detail		 Chr16:58318304 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1441 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214331594
MGI SNP Detail		 Chr16:58318338 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1407 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227290307
MGI SNP Detail		 Chr16:58318339 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1406 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253571721
MGI SNP Detail		 Chr16:58318340 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1405 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217753399
MGI SNP Detail		 Chr16:58318366 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1379 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47304517
MGI SNP Detail		 Chr16:58318369 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1376 bp downstream
 SNP C/T T T T T T T T T T T C T C C C C
rs251508843
MGI SNP Detail		 Chr16:58318378 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1367 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216198914
MGI SNP Detail		 Chr16:58318454 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1291 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48948764
MGI SNP Detail		 Chr16:58318455 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1290 bp downstream
 SNP A/T T T T T T T T T T T T T T A T
rs48354357
MGI SNP Detail		 Chr16:58318535 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1210 bp downstream
 SNP C/T C C C C C C C C C C T C T T T T
rs220538731
MGI SNP Detail		 Chr16:58318542 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1203 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs242326053
MGI SNP Detail		 Chr16:58318553 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1192 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263777805
MGI SNP Detail		 Chr16:58318580 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1165 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226958050
MGI SNP Detail		 Chr16:58318587 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1158 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248025164
MGI SNP Detail		 Chr16:58318599 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1146 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260069241
MGI SNP Detail		 Chr16:58318635 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1110 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228003424
MGI SNP Detail		 Chr16:58318697 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1048 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238687767
MGI SNP Detail		 Chr16:58318702 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 1043 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258350837
MGI SNP Detail		 Chr16:58318747 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 998 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs51887531
MGI SNP Detail		 Chr16:58318816 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 929 bp downstream
 SNP A/G A A A A A A A A A A G A G A G A
rs50904251
MGI SNP Detail		 Chr16:58318851 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 894 bp downstream
 SNP A/G A A A A A A A A A A G A G A G A
rs217685823
MGI SNP Detail		 Chr16:58318879 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 866 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48987426
MGI SNP Detail		 Chr16:58318880 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 865 bp downstream
 SNP C/T T T T T T T T T T T C T C C C T
rs245084061
MGI SNP Detail		 Chr16:58318882 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 863 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215674241
MGI SNP Detail		 Chr16:58318892 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 853 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231697070
MGI SNP Detail		 Chr16:58318928 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 817 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51826179
MGI SNP Detail		 Chr16:58318935 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 810 bp downstream
 SNP G/T G G G G G G G G G G G G T G
rs212423605
MGI SNP Detail		 Chr16:58318975 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 770 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237527272
MGI SNP Detail		 Chr16:58318982 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 763 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260529692
MGI SNP Detail		 Chr16:58318983 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 762 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs46052676
MGI SNP Detail		 Chr16:58319009 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 736 bp downstream
 SNP C/T C C C C C C C C C C C C T C T C
rs233950038
MGI SNP Detail		 Chr16:58319020 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 725 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253778960
MGI SNP Detail		 Chr16:58319023 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 722 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219709507
MGI SNP Detail		 Chr16:58319047 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 698 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs50969111
MGI SNP Detail		 Chr16:58319049 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 696 bp downstream
 SNP C/T C C C C C C C C C C T C T C T C
rs265246551
MGI SNP Detail		 Chr16:58319050 Rr404899 within coordinates of
Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 695 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220426140
MGI SNP Detail		 Chr16:58319067 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 678 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245016892
MGI SNP Detail		 Chr16:58319071 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr138857 within coordinates of
Tssr141617 674 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs263993644
MGI SNP Detail		 Chr16:58319107 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 638 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49030863
MGI SNP Detail		 Chr16:58319127 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 618 bp downstream
 SNP C/T T T T T T T T T T T C T C T C T
rs48830854
MGI SNP Detail		 Chr16:58319142 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 603 bp downstream
 SNP A/G A A A A A A A A A A G A G A G A
rs257905799
MGI SNP Detail		 Chr16:58319247 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 498 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46262232
MGI SNP Detail		 Chr16:58319328 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 417 bp downstream
 SNP C/T T T T T T T T T T T T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244832870
MGI SNP Detail		 Chr16:58319362 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 383 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212606839
MGI SNP Detail		 Chr16:58319374 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 371 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46445104
MGI SNP Detail		 Chr16:58319436 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 309 bp downstream
 SNP C/G G G G G G G G G G G C G C C C
rs259661915
MGI SNP Detail		 Chr16:58319473 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 272 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219703087
MGI SNP Detail		 Chr16:58319503 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 242 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs234068498
MGI SNP Detail		 Chr16:58319517 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 228 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253679330
MGI SNP Detail		 Chr16:58319549 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 196 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219741185
MGI SNP Detail		 Chr16:58319567 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 178 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233049347
MGI SNP Detail		 Chr16:58319598 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 147 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255628505
MGI SNP Detail		 Chr16:58319600 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 145 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs46111521
MGI SNP Detail		 Chr16:58319620 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 125 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs241992072
MGI SNP Detail		 Chr16:58319644 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 101 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48901247
MGI SNP Detail		 Chr16:58319719 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141616 within coordinates of
Tssr141617 26 bp downstream
 SNP A/G G G G G G G G G G G A G A G A G
rs222658705
MGI SNP Detail		 Chr16:58319797 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 32 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238894860
MGI SNP Detail		 Chr16:58319814 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 49 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs51172585
MGI SNP Detail		 Chr16:58319877 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 112 bp upstream
 SNP C/T C C C C C C C C C C C C C T
rs224887334
MGI SNP Detail		 Chr16:58319912 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 147 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244385300
MGI SNP Detail		 Chr16:58319914 Rr517409 within coordinates of
St3gal6 within coordinates of
Tssr141617 149 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261289981
MGI SNP Detail		 Chr16:58320023 St3gal6 within coordinates of
Tssr141617 258 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50461111
MGI SNP Detail		 Chr16:58320043 St3gal6 within coordinates of
Tssr141617 278 bp upstream
 SNP G/T T T T T T T T T T T G T G G T
rs254181531
MGI SNP Detail		 Chr16:58320053 St3gal6 within coordinates of
Tssr141617 288 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219634465
MGI SNP Detail		 Chr16:58320063 St3gal6 within coordinates of
Tssr141617 298 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246791494
MGI SNP Detail		 Chr16:58320086 St3gal6 within coordinates of
Tssr141617 321 bp upstream
 SNP C/T C T
rs247341189
MGI SNP Detail		 Chr16:58320092 St3gal6 within coordinates of
Tssr141617 327 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213740117
MGI SNP Detail		 Chr16:58320102 St3gal6 within coordinates of
Tssr141617 337 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 143
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory