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Mouse SNP Summary
Symbol
Name
ID 		Tssr142017
transcription start site region 142017
MGI:6069784

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240773321
MGI SNP Detail		 Chr16:89938742 Rr519037 within coordinates of
Tiam1 within coordinates of
Tssr142017 1927 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259731702
MGI SNP Detail		 Chr16:89938747 Rr519037 within coordinates of
Tiam1 within coordinates of
Tssr142017 1922 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219560090
MGI SNP Detail		 Chr16:89938757 Rr519037 within coordinates of
Tiam1 within coordinates of
Tssr142017 1912 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238665696
MGI SNP Detail		 Chr16:89938829 Rr519037 within coordinates of
Tiam1 within coordinates of
Tssr142017 1840 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254213869
MGI SNP Detail		 Chr16:89938895 Tiam1 within coordinates of
Tssr142017 1774 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219023325
MGI SNP Detail		 Chr16:89938941 Tiam1 within coordinates of
Tssr142017 1728 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586804723
MGI SNP Detail		 Chr16:89938943 Tiam1 within coordinates of
Tssr142017 1726 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580370614
MGI SNP Detail		 Chr16:89938971 Tiam1 within coordinates of
Tssr142017 1698 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583450790
MGI SNP Detail		 Chr16:89938981 Tiam1 within coordinates of
Tssr142017 1688 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587539414
MGI SNP Detail		 Chr16:89938983 Tiam1 within coordinates of
Tssr142017 1686 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580389375
MGI SNP Detail		 Chr16:89938987 Tiam1 within coordinates of
Tssr142017 1682 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583855153
MGI SNP Detail		 Chr16:89938989 Tiam1 within coordinates of
Tssr142017 1680 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586785501
MGI SNP Detail		 Chr16:89939005 Tiam1 within coordinates of
Tssr142017 1664 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T A T A T A T T T T A T T A T T A A
rs247503319
MGI SNP Detail		 Chr16:89939053 Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1616 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266169135
MGI SNP Detail		 Chr16:89939061 Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1608 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231810457
MGI SNP Detail		 Chr16:89939159 Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1510 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs249266727
MGI SNP Detail		 Chr16:89939193 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1476 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262467159
MGI SNP Detail		 Chr16:89939220 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1449 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226408304
MGI SNP Detail		 Chr16:89939309 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1360 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243436734
MGI SNP Detail		 Chr16:89939316 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Rr519039 within coordinates of
Tiam1 within coordinates of
Tssr142017 1353 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212826107
MGI SNP Detail		 Chr16:89939383 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1286 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs228552304
MGI SNP Detail		 Chr16:89939413 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1256 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254378084
MGI SNP Detail		 Chr16:89939435 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1234 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A C A C A C A A A A C A A C A A C C
rs215818371
MGI SNP Detail		 Chr16:89939446 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1223 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238357607
MGI SNP Detail		 Chr16:89939449 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1220 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261863051
MGI SNP Detail		 Chr16:89939516 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1153 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214194860
MGI SNP Detail		 Chr16:89939524 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1145 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232349661
MGI SNP Detail		 Chr16:89939530 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1139 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248453942
MGI SNP Detail		 Chr16:89939573 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1096 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218991160
MGI SNP Detail		 Chr16:89939590 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1079 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250706651
MGI SNP Detail		 Chr16:89939614 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1055 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261179464
MGI SNP Detail		 Chr16:89939625 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1044 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs224244341
MGI SNP Detail		 Chr16:89939626 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1043 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs246537196
MGI SNP Detail		 Chr16:89939645 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1024 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257688894
MGI SNP Detail		 Chr16:89939669 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 1000 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226754478
MGI SNP Detail		 Chr16:89939738 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 931 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237057467
MGI SNP Detail		 Chr16:89939793 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 876 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256704043
MGI SNP Detail		 Chr16:89939813 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 856 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233089044
MGI SNP Detail		 Chr16:89939895 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 774 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260088997
MGI SNP Detail		 Chr16:89939984 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 685 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A G A G A G A A A A G A G A A G G
rs215711157
MGI SNP Detail		 Chr16:89940029 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 640 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232668111
MGI SNP Detail		 Chr16:89940041 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 628 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250391802
MGI SNP Detail		 Chr16:89940070 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 599 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214160680
MGI SNP Detail		 Chr16:89940264 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 405 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229784572
MGI SNP Detail		 Chr16:89940603 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Rr519038 within coordinates of
Tiam1 within coordinates of
Tssr142017 66 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248417016
MGI SNP Detail		 Chr16:89940936 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr404948 within coordinates of
Rr519041 within coordinates of
Tssr142017 254 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213122888
MGI SNP Detail		 Chr16:89941020 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 338 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G A G A G A G G G G A G A G G A
rs239784069
MGI SNP Detail		 Chr16:89941049 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 367 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264409490
MGI SNP Detail		 Chr16:89941267 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 585 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T A T A T T T T T T T A
rs224584573
MGI SNP Detail		 Chr16:89941282 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 600 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580629974
MGI SNP Detail		 Chr16:89941291 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 609 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249173910
MGI SNP Detail		 Chr16:89941353 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 671 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251317551
MGI SNP Detail		 Chr16:89941381 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 699 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220444821
MGI SNP Detail		 Chr16:89941397 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 715 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs237459239
MGI SNP Detail		 Chr16:89941415 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 733 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256943989
MGI SNP Detail		 Chr16:89941417 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 735 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs225993939
MGI SNP Detail		 Chr16:89941426 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 744 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs248218771
MGI SNP Detail		 Chr16:89941438 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 756 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C T C C C C
rs265489091
MGI SNP Detail		 Chr16:89941463 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 781 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232371897
MGI SNP Detail		 Chr16:89941468 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 786 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243501624
MGI SNP Detail		 Chr16:89941481 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 799 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33520478
MGI SNP Detail		 Chr16:89941516 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 834 bp upstream
 SNP A/G G G G G G G A G G G
rs255981265
MGI SNP Detail		 Chr16:89941541 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223286759
MGI SNP Detail		 Chr16:89941547 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 865 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242819222
MGI SNP Detail		 Chr16:89941603 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 921 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs217708242
MGI SNP Detail		 Chr16:89941615 Cpgi8419 within coordinates of
Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 933 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs242381383
MGI SNP Detail		 Chr16:89941705 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1023 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C G C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs255003724
MGI SNP Detail		 Chr16:89941706 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1024 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs216624121
MGI SNP Detail		 Chr16:89941721 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1039 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs239105726
MGI SNP Detail		 Chr16:89941752 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1070 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251286808
MGI SNP Detail		 Chr16:89941788 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1106 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220301440
MGI SNP Detail		 Chr16:89941815 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1133 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs229954926
MGI SNP Detail		 Chr16:89941840 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1158 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250582581
MGI SNP Detail		 Chr16:89941862 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1180 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225978490
MGI SNP Detail		 Chr16:89941889 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1207 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251063310
MGI SNP Detail		 Chr16:89941924 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1242 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs33520477
MGI SNP Detail		 Chr16:89941929 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1247 bp upstream
 SNP C/G G G G C G C C G
rs263131453
MGI SNP Detail		 Chr16:89941942 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1260 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581449417
MGI SNP Detail		 Chr16:89941952 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1270 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs225162980
MGI SNP Detail		 Chr16:89941981 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1299 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237603343
MGI SNP Detail		 Chr16:89942003 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1321 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs256293390
MGI SNP Detail		 Chr16:89942010 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1328 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs223152949
MGI SNP Detail		 Chr16:89942018 Gm10789 within coordinates of
Gm56608 within coordinates of
Rr519041 within coordinates of
Tssr142017 1336 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs242785071
MGI SNP Detail		 Chr16:89942051 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1369 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265859202
MGI SNP Detail		 Chr16:89942076 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1394 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233685674
MGI SNP Detail		 Chr16:89942085 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1403 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260458581
MGI SNP Detail		 Chr16:89942087 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1405 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs216111856
MGI SNP Detail		 Chr16:89942137 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1455 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs235078863
MGI SNP Detail		 Chr16:89942206 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1524 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584533473
MGI SNP Detail		 Chr16:89942245 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1563 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245308147
MGI SNP Detail		 Chr16:89942252 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1570 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs214774022
MGI SNP Detail		 Chr16:89942255 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1573 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs229922404
MGI SNP Detail		 Chr16:89942266 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1584 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs250544681
MGI SNP Detail		 Chr16:89942311 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1629 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226374626
MGI SNP Detail		 Chr16:89942312 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1630 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240535608
MGI SNP Detail		 Chr16:89942333 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1651 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262829086
MGI SNP Detail		 Chr16:89942342 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1660 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G T T
rs224809530
MGI SNP Detail		 Chr16:89942356 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1674 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs237438130
MGI SNP Detail		 Chr16:89942369 Gm10789 within coordinates of
Gm56608 within coordinates of
Tssr142017 1687 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250437218
MGI SNP Detail		 Chr16:89942406 Gm10789 within coordinates of
Tssr142017 1724 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T G T G T G T T T T G T T G T T G G
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Showing SNP(s) 1 - 100 of 111
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory