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Mouse SNP Summary
Symbol
Name
ID 		Tssr143037
transcription start site region 143037
MGI:6070804

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs13461936
MGI SNP Detail		 Chr17:24690992 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1877 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G
rs239853529
MGI SNP Detail		 Chr17:24690998 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1871 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108653656
MGI SNP Detail		 Chr17:24691031 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1838 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33443437
MGI SNP Detail		 Chr17:24691051 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1818 bp upstream
 SNP C/T T C T T
rs108613315
MGI SNP Detail		 Chr17:24691125 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1744 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs266128009
MGI SNP Detail		 Chr17:24691154 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1715 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232843465
MGI SNP Detail		 Chr17:24691187 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1682 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs107931430
MGI SNP Detail		 Chr17:24691308 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1561 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108436915
MGI SNP Detail		 Chr17:24691322 Pgp within coordinates of
Rr523320 within coordinates of
Tssr143037 1547 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225887667
MGI SNP Detail		 Chr17:24691548 Pgp within coordinates of
Tssr143037 1321 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108701168
MGI SNP Detail		 Chr17:24691563 Pgp within coordinates of
Tssr143037 1306 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs255751863
MGI SNP Detail		 Chr17:24691574 Pgp within coordinates of
Tssr143037 1295 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108380073
MGI SNP Detail		 Chr17:24691694 Pgp within coordinates of
Tssr143037 1175 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108028419
MGI SNP Detail		 Chr17:24691793 Pgp within coordinates of
Tssr143037 1076 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219606310
MGI SNP Detail		 Chr17:24691846 Pgp within coordinates of
Tssr143037 1023 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108002865
MGI SNP Detail		 Chr17:24691894 Pgp within coordinates of
Tssr143037 975 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258364642
MGI SNP Detail		 Chr17:24691953 Pgp within coordinates of
Tssr143037 916 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215770613
MGI SNP Detail		 Chr17:24691967 Pgp within coordinates of
Tssr143037 902 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108847802
MGI SNP Detail		 Chr17:24692048 Pgp within coordinates of
Tssr143037 821 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251366352
MGI SNP Detail		 Chr17:24692105 Tssr143037 764 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs218787165
MGI SNP Detail		 Chr17:24692119 Tssr143037 750 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229792994
MGI SNP Detail		 Chr17:24692123 Tssr143037 746 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs108690208
MGI SNP Detail		 Chr17:24692131 Tssr143037 738 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226183528
MGI SNP Detail		 Chr17:24692144 Tssr143037 725 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246332271
MGI SNP Detail		 Chr17:24692177 Tssr143037 692 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108002624
MGI SNP Detail		 Chr17:24692223 Tssr143037 646 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108120923
MGI SNP Detail		 Chr17:24692279 Tssr143037 590 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237327723
MGI SNP Detail		 Chr17:24692308 Tssr143037 561 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254418555
MGI SNP Detail		 Chr17:24692312 Tssr143037 557 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs107625682
MGI SNP Detail		 Chr17:24692314 Tssr143037 555 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253205281
MGI SNP Detail		 Chr17:24692361 Tssr143037 508 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108488128
MGI SNP Detail		 Chr17:24692415 Rr523321 within coordinates of
Tssr143037 454 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234485557
MGI SNP Detail		 Chr17:24692421 Rr523321 within coordinates of
Tssr143037 448 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs107828178
MGI SNP Detail		 Chr17:24692422 Rr523321 within coordinates of
Tssr143037 447 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108328619
MGI SNP Detail		 Chr17:24692432 Rr523321 within coordinates of
Tssr143037 437 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108453389
MGI SNP Detail		 Chr17:24692556 Mlst8 within coordinates of
Rr523321 within coordinates of
Tssr143037 313 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245193167
MGI SNP Detail		 Chr17:24692565 Mlst8 within coordinates of
Rr523321 within coordinates of
Tssr143037 304 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108690603
MGI SNP Detail		 Chr17:24692575 Mlst8 within coordinates of
Rr523321 within coordinates of
Tssr143037 294 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213074392
MGI SNP Detail		 Chr17:24692605 Mlst8 within coordinates of
Rr523321 within coordinates of
Tssr143037 264 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs13472413
MGI SNP Detail		 Chr17:24692794 Mlst8 within coordinates of
Rr523321 within coordinates of
Tssr143037 75 bp upstream
 SNP A/G A A G A A A
rs264151160
MGI SNP Detail		 Chr17:24693007 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 111 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225584610
MGI SNP Detail		 Chr17:24693302 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 406 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241085177
MGI SNP Detail		 Chr17:24693338 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 442 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258607571
MGI SNP Detail		 Chr17:24693347 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 451 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219812274
MGI SNP Detail		 Chr17:24693477 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 581 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50676666
MGI SNP Detail		 Chr17:24693489 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 593 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33116352
MGI SNP Detail		 Chr17:24693513 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 617 bp downstream
 SNP C/T C C T C C C
rs217774779
MGI SNP Detail		 Chr17:24693552 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 656 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248093697
MGI SNP Detail		 Chr17:24693602 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 706 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs266228763
MGI SNP Detail		 Chr17:24693605 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 709 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108328688
MGI SNP Detail		 Chr17:24693645 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 749 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249662954
MGI SNP Detail		 Chr17:24693793 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 897 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259474486
MGI SNP Detail		 Chr17:24693860 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 964 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226918454
MGI SNP Detail		 Chr17:24693886 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 990 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245080055
MGI SNP Detail		 Chr17:24693904 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1008 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48004016
MGI SNP Detail		 Chr17:24693938 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1042 bp downstream
 SNP T T T
rs254866926
MGI SNP Detail		 Chr17:24694114 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1218 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218012345
MGI SNP Detail		 Chr17:24694116 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1220 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33601354
MGI SNP Detail		 Chr17:24694122 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1226 bp downstream
 SNP A/G G G A G G G
rs262900919
MGI SNP Detail		 Chr17:24694260 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1364 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214395537
MGI SNP Detail		 Chr17:24694314 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1418 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212081737
MGI SNP Detail		 Chr17:24694378 Bricd5 within coordinates of
Mlst8 within coordinates of
Tssr143037 1482 bp downstream
 SNP A/G G A
rs231362713
MGI SNP Detail		 Chr17:24694520 Mlst8 within coordinates of
Tssr143037 1624 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108480679
MGI SNP Detail		 Chr17:24694526 Mlst8 within coordinates of
Tssr143037 1630 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217677386
MGI SNP Detail		 Chr17:24694544 Mlst8 within coordinates of
Tssr143037 1648 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251000927
MGI SNP Detail		 Chr17:24694618 Mlst8 within coordinates of
Tssr143037 1722 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260024390
MGI SNP Detail		 Chr17:24694677 Mlst8 within coordinates of
Tssr143037 1781 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226551485
MGI SNP Detail		 Chr17:24694753 Mlst8 within coordinates of
Tssr143037 1857 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246760113
MGI SNP Detail		 Chr17:24694755 Mlst8 within coordinates of
Tssr143037 1859 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs13472414
MGI SNP Detail		 Chr17:24694806 Mlst8 within coordinates of
Tssr143037 1910 bp downstream
 SNP A/C A C C C
rs226955731
MGI SNP Detail		 Chr17:24694812 Mlst8 within coordinates of
Tssr143037 1916 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
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Showing SNP(s) 1 - 71 of 71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory