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Mouse SNP Summary
Symbol
Name
ID 		Tssr143493
transcription start site region 143493
MGI:6071260

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Showing SNP(s) 1 - 33 of 33

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SNP Density Heatmap
Chr17 from 29,298,550 bp to 29,302,561 bp
(4,012 bp)
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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs108211586
MGI SNP Detail		 Chr17:29298712 Rr392491 within coordinates of
Tssr143493 1838 bp upstream
 SNP C/T T C
rs108679553
MGI SNP Detail		 Chr17:29298735 Rr392491 within coordinates of
Tssr143493 1815 bp upstream
 SNP C/T C T
rs108532202
MGI SNP Detail		 Chr17:29298766 Rr392491 within coordinates of
Tssr143493 1784 bp upstream
 SNP A/G A G
rs51400580
MGI SNP Detail		 Chr17:29298855 Rr392491 within coordinates of
Tssr143493 1695 bp upstream
 SNP A/G A G G A G G A A A A G A A A A A A
rs108752477
MGI SNP Detail		 Chr17:29298928 Tssr143493 1622 bp upstream
 SNP C/T T C
rs108523368
MGI SNP Detail		 Chr17:29298929 Tssr143493 1621 bp upstream
 SNP A/G G A
rs108471201
MGI SNP Detail		 Chr17:29298995 Tssr143493 1555 bp upstream
 SNP A/G G A
rs248859971
MGI SNP Detail		 Chr17:29299108 Tssr143493 1442 bp upstream
 SNP A/G A G
rs214927164
MGI SNP Detail		 Chr17:29299648 Rr524789 within coordinates of
Tssr143493 902 bp upstream
 SNP A/T T A
rs52116070
MGI SNP Detail		 Chr17:29299679 Rr524789 within coordinates of
Tssr143493 871 bp upstream
 SNP C/T T C C T C C C T T C C C T T C T T
rs108528614
MGI SNP Detail		 Chr17:29299912 Rr524789 within coordinates of
Tssr143493 638 bp upstream
 SNP A/G G A
rs48348774
MGI SNP Detail		 Chr17:29299965 Rr524789 within coordinates of
Tssr143493 585 bp upstream
 SNP A/G A A A A A A A A A A A A A G A
rs47507553
MGI SNP Detail		 Chr17:29299971 Rr524789 within coordinates of
Tssr143493 579 bp upstream
 SNP A/T A T T A T T T A A A T A A A A A A
rs51993813
MGI SNP Detail		 Chr17:29300051 Rr524789 within coordinates of
Tssr143493 499 bp upstream
 SNP C/T C T T C T T C C C C T C C C C C C
rs49875808
MGI SNP Detail		 Chr17:29300164 Rr524789 within coordinates of
Tssr143493 386 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs46535009
MGI SNP Detail		 Chr17:29300176 Rr524789 within coordinates of
Tssr143493 374 bp upstream
 SNP C/T C T T C T T C C C C T C C C C C C
rs108329308
MGI SNP Detail		 Chr17:29300219 Rr524789 within coordinates of
Tssr143493 331 bp upstream
 SNP A/G G A
rs107920755
MGI SNP Detail		 Chr17:29300261 Rr524789 within coordinates of
Tssr143493 289 bp upstream
 SNP C/G C G
rs108886056
MGI SNP Detail		 Chr17:29300298 Rr524789 within coordinates of
Tssr143493 252 bp upstream
 SNP G/T T G
rs108336377
MGI SNP Detail		 Chr17:29300381 Rr524789 within coordinates of
Tssr143493 169 bp upstream
 SNP C/T T C
rs48730502
MGI SNP Detail		 Chr17:29300427 Rr524789 within coordinates of
Tssr143493 123 bp upstream
 SNP A/G A G G A
rs29501553
MGI SNP Detail		 Chr17:29300844 Rr524789 within coordinates of
Tssr143493 283 bp downstream
 SNP C/G G G C C G C C C G G C C C G G C G G
rs50258855
MGI SNP Detail		 Chr17:29301055 Rr370203 within coordinates of
Rr524789 within coordinates of
Tssr143493 494 bp downstream
 SNP A/G G G G G G G A G G A A G G G G
rs33130913
MGI SNP Detail		 Chr17:29301501 Rr524789 within coordinates of
Tssr143493 940 bp downstream
 SNP C/T C T C T C
rs52577933
MGI SNP Detail		 Chr17:29301673 Tssr143493 1112 bp downstream
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs108182625
MGI SNP Detail		 Chr17:29301688 Tssr143493 1127 bp downstream
 SNP A/T T A
rs108714843
MGI SNP Detail		 Chr17:29301704 Tssr143493 1143 bp downstream
 SNP C/T T C
rs50009951
MGI SNP Detail		 Chr17:29301715 Tssr143493 1154 bp downstream
 SNP C/T T C
rs33271313
MGI SNP Detail		 Chr17:29301735 Tssr143493 1174 bp downstream
 SNP C/T C C T C
rs52275297
MGI SNP Detail		 Chr17:29301794 Tssr143493 1233 bp downstream
 SNP C/T T C
rs52070154
MGI SNP Detail		 Chr17:29302134 Tssr143493 1573 bp downstream
 SNP G G
rs33259706
MGI SNP Detail		 Chr17:29302381 Tssr143493 1820 bp downstream
 SNP C/T T C C
rs47096847
MGI SNP Detail		 Chr17:29302537 Tssr143493 1976 bp downstream
 SNP A/G A G
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Showing SNP(s) 1 - 33 of 33
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory