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Mouse SNP Summary
Symbol
Name
ID
Tssr143788
transcription start site region 143788
MGI:6071555

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263533637
MGI SNP Detail
Chr17:33855174 Gm20507 within coordinates of
Tssr143788 1920 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33375555
MGI SNP Detail
Chr17:33855188 Gm20507 within coordinates of
Tssr143788 1906 bp upstream
SNP G/T G G T T T G T G T T G T T G T T T
rs33635856
MGI SNP Detail
Chr17:33855192 Gm20507 within coordinates of
Tssr143788 1902 bp upstream
SNP A/C C C A C C
rs253816619
MGI SNP Detail
Chr17:33855257 Gm20507 within coordinates of
Tssr143788 1837 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A G A A A G
rs224250220
MGI SNP Detail
Chr17:33855270 Gm20507 within coordinates of
Tssr143788 1824 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246470447
MGI SNP Detail
Chr17:33855353 Gm20507 within coordinates of
Tssr143788 1741 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T T C
rs259646186
MGI SNP Detail
Chr17:33855489 Gm20507 within coordinates of
Tssr143788 1605 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T T C
rs231315129
MGI SNP Detail
Chr17:33855496 Gm20507 within coordinates of
Tssr143788 1598 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33098482
MGI SNP Detail
Chr17:33855666 Gm20507 within coordinates of
Tssr143788 1428 bp upstream
SNP C/T C T C T T
rs33693850
MGI SNP Detail
Chr17:33855686 Gm20507 within coordinates of
Tssr143788 1408 bp upstream
SNP A/G A G A G G
rs230710217
MGI SNP Detail
Chr17:33855730 Gm20507 within coordinates of
Tssr143788 1364 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245954564
MGI SNP Detail
Chr17:33855748 Gm20507 within coordinates of
Tssr143788 1346 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C C C
rs212314679
MGI SNP Detail
Chr17:33855824 Gm20507 within coordinates of
Tssr143788 1270 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs108451360
MGI SNP Detail
Chr17:33855917 Gm20507 within coordinates of
Tssr143788 1177 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T C C C T T T T T T T T T T T T T
rs254560191
MGI SNP Detail
Chr17:33855990 Gm20507 within coordinates of
Tssr143788 1104 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46704605
MGI SNP Detail
Chr17:33856026 Gm20507 within coordinates of
Tssr143788 1068 bp upstream
SNP A/T T A A T
rs33470276
MGI SNP Detail
Chr17:33856080 Gm20507 within coordinates of
Tssr143788 1014 bp upstream
SNP C/T C T C T T T
rs33400457
MGI SNP Detail
Chr17:33856174 Gm20507 within coordinates of
Tssr143788 920 bp upstream
SNP C/T C T C T T T
rs33253928
MGI SNP Detail
Chr17:33856312 Gm20507 within coordinates of
Tssr143788 782 bp upstream
SNP A/G A A G G G A G A G G A A G G A G G G
rs246814906
MGI SNP Detail
Chr17:33856447 Gm20507 within coordinates of
Tssr143788 647 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33575279
MGI SNP Detail
Chr17:33856492 Gm20507 within coordinates of
Tssr143788 602 bp upstream
SNP A/T A A T T T A T A T T A A T T A T T T
rs218512668
MGI SNP Detail
Chr17:33856576 Gm20507 within coordinates of
Tssr143788 518 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33723551
MGI SNP Detail
Chr17:33856583 Gm20507 within coordinates of
Tssr143788 511 bp upstream
SNP G/T G G T T T G T G T T G G T T G T T T
rs33461941
MGI SNP Detail
Chr17:33856659 Gm20507 within coordinates of
Tssr143788 435 bp upstream
SNP A/G G G A A A G A G A A G G A A G A A A
rs231910777
MGI SNP Detail
Chr17:33856747 Gm20507 within coordinates of
Tssr143788 347 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245936900
MGI SNP Detail
Chr17:33856793 Gm20507 within coordinates of
Tssr143788 301 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264992971
MGI SNP Detail
Chr17:33856898 Gm20507 within coordinates of
Tssr143788 196 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33223086
MGI SNP Detail
Chr17:33856988 Gm20507 within coordinates of
Tssr143788 106 bp upstream
SNP A/G A A G A G G G
rs246042095
MGI SNP Detail
Chr17:33856998 Gm20507 within coordinates of
Tssr143788 96 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T T T
rs49514731
MGI SNP Detail
Chr17:33857067 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143787 within coordinates of
Tssr143788 27 bp upstream
SNP A/G G G G G G G A G G G A G A G A
rs225189579
MGI SNP Detail
Chr17:33857209 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 112 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48141291
MGI SNP Detail
Chr17:33857429 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 332 bp downstream
SNP A/G A A A A A A G A G A G G G A G
rs51493843
MGI SNP Detail
Chr17:33857446 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 349 bp downstream
SNP A/G A A A A A A G A A A G A G A
rs33359636
MGI SNP Detail
Chr17:33857464 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 367 bp downstream
SNP C/T C C T T T C T C T T T C T T T T T T
rs33111993
MGI SNP Detail
Chr17:33857580 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 483 bp downstream
SNP A/C A A C C C A C A C C A A C C A C C C
rs579592190
MGI SNP Detail
Chr17:33857650 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 553 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33191832
MGI SNP Detail
Chr17:33857735 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 638 bp downstream
SNP A/G G G A A A G A A A G G A A G A A A G
rs232209626
MGI SNP Detail
Chr17:33857766 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 669 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T T T C C C C C C C C C C C C C
rs33156103
MGI SNP Detail
Chr17:33857908 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 811 bp downstream
SNP A/G A G G A G
rs582909993
MGI SNP Detail
Chr17:33857943 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 846 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218685524
MGI SNP Detail
Chr17:33857946 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 849 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33290476
MGI SNP Detail
Chr17:33858013 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 916 bp downstream
SNP C/T T C C C C
rs33413609
MGI SNP Detail
Chr17:33858075 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 978 bp downstream
SNP A/G A G G G G
rs33608247
MGI SNP Detail
Chr17:33858088 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 991 bp downstream
SNP A/C A C C C C
rs262263340
MGI SNP Detail
Chr17:33858216 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1119 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236870473
MGI SNP Detail
Chr17:33858229 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1132 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs108555091
MGI SNP Detail
Chr17:33858255 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1158 bp downstream
SNP A/G A A A G G G G G A A G A A A A A A A G G A A G A G G A G A A G A G G G G G G G A G G A G A A A A
rs33201739
MGI SNP Detail
Chr17:33858281 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1184 bp downstream
SNP A/T A T
rs248255377
MGI SNP Detail
Chr17:33858329 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1232 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs266222496
MGI SNP Detail
Chr17:33858369 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1272 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231920723
MGI SNP Detail
Chr17:33858387 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1290 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258428741
MGI SNP Detail
Chr17:33858395 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1298 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33322820
MGI SNP Detail
Chr17:33858441 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1344 bp downstream
SNP C/T T C T C T C
rs33283080
MGI SNP Detail
Chr17:33858448 Gm20507 within coordinates of
Pram1 within coordinates of
Tssr143788 1351 bp downstream
SNP A/C C A C A C A
rs52472614
MGI SNP Detail
Chr17:33858469 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1372 bp downstream
SNP A/T A T T T T
rs230053163
MGI SNP Detail
Chr17:33858484 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1387 bp downstream
SNP A/G A G
rs245784448
MGI SNP Detail
Chr17:33858489 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1392 bp downstream
SNP A/G A G
rs212850856
MGI SNP Detail
Chr17:33858503 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1406 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs108583058
MGI SNP Detail
Chr17:33858504 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1407 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A A A G G G G G G G G G G G G G
rs33136294
MGI SNP Detail
Chr17:33858620 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1523 bp downstream
SNP G/T T G T
rs108823196
MGI SNP Detail
Chr17:33858622 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1525 bp downstream
SNP A/G/T T T G G G G G T T G T T T T T T T G G G T T G T G G T T T G T G G G G G G G T G G T A T T T
rs107651321
MGI SNP Detail
Chr17:33858623 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1526 bp downstream
SNP A/C A A C C C C C A A A A A A A A A C C C A A C A C C A A A C A C C C C C C C A C C A A A A A
rs238567442
MGI SNP Detail
Chr17:33858666 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1569 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261857855
MGI SNP Detail
Chr17:33858713 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1616 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108585129
MGI SNP Detail
Chr17:33858824 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1727 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108384357
MGI SNP Detail
Chr17:33858827 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1730 bp downstream
SNP C/G C G G
rs47693976
MGI SNP Detail
Chr17:33858832 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1735 bp downstream
SNP G/T T G G T
rs231695071
MGI SNP Detail
Chr17:33858842 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1745 bp downstream
SNP A/G A G
rs242333008
MGI SNP Detail
Chr17:33858889 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1792 bp downstream
Tssr147440 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G
rs108433857
MGI SNP Detail
Chr17:33858958 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1861 bp downstream
SNP A A A
rs108464646
MGI SNP Detail
Chr17:33858960 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1863 bp downstream
SNP A A A
rs108471762
MGI SNP Detail
Chr17:33858974 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1877 bp downstream
SNP A A A
rs265116363
MGI SNP Detail
Chr17:33859044 Gm20507 within coordinates of
Pram1 within coordinates of
Rr392542 within coordinates of
Tssr143788 1947 bp downstream
SNP A/G G G G G G G G G G G G G A G G G G G G A G A A A A G G G G G G
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Showing SNP(s) 1 - 73 of 73

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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