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Mouse SNP Summary
Symbol
Name
ID 		Tssr145247
transcription start site region 145247
MGI:6073014

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254242512
MGI SNP Detail		 Chr17:56257654 Rr342199 within coordinates of
Tssr145247 1974 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs223124448
MGI SNP Detail		 Chr17:56257663 Rr342199 within coordinates of
Tssr145247 1965 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240492382
MGI SNP Detail		 Chr17:56257714 Rr342199 within coordinates of
Tssr145247 1914 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs265622656
MGI SNP Detail		 Chr17:56257793 Rr342199 within coordinates of
Tssr145247 1835 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108883290
MGI SNP Detail		 Chr17:56257794 Rr342199 within coordinates of
Tssr145247 1834 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs255948891
MGI SNP Detail		 Chr17:56257799 Rr342199 within coordinates of
Tssr145247 1829 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108341836
MGI SNP Detail		 Chr17:56257825 Rr342199 within coordinates of
Tssr145247 1803 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224861485
MGI SNP Detail		 Chr17:56257842 Rr342199 within coordinates of
Tssr145247 1786 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs243449712
MGI SNP Detail		 Chr17:56257884 Rr342199 within coordinates of
Tssr145247 1744 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs217370960
MGI SNP Detail		 Chr17:56257888 Rr342199 within coordinates of
Tssr145247 1740 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs235536989
MGI SNP Detail		 Chr17:56257889 Rr342199 within coordinates of
Tssr145247 1739 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108392870
MGI SNP Detail		 Chr17:56257943 Rr342199 within coordinates of
Tssr145247 1685 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs217220418
MGI SNP Detail		 Chr17:56257960 Rr342199 within coordinates of
Tssr145247 1668 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237964180
MGI SNP Detail		 Chr17:56258018 Rr342199 within coordinates of
Tssr145247 1610 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs108270955
MGI SNP Detail		 Chr17:56258214 Tssr145247 1414 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108709727
MGI SNP Detail		 Chr17:56258225 Tssr145247 1403 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230950139
MGI SNP Detail		 Chr17:56258231 Tssr145247 1397 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs108417689
MGI SNP Detail		 Chr17:56258273 Tssr145247 1355 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108504165
MGI SNP Detail		 Chr17:56258310 Tssr145247 1318 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108771390
MGI SNP Detail		 Chr17:56258352 Tssr145247 1276 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263823729
MGI SNP Detail		 Chr17:56258366 Tssr145247 1262 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223700171
MGI SNP Detail		 Chr17:56258454 Tssr145247 1174 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs243792336
MGI SNP Detail		 Chr17:56258529 Tssr145247 1099 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265010036
MGI SNP Detail		 Chr17:56258603 Tssr145247 1025 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs224793659
MGI SNP Detail		 Chr17:56258719 Tssr145247 909 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs107785982
MGI SNP Detail		 Chr17:56258720 Tssr145247 908 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261151251
MGI SNP Detail		 Chr17:56258730 Tssr145247 898 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107720964
MGI SNP Detail		 Chr17:56258924 Tssr145247 704 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228484902
MGI SNP Detail		 Chr17:56259008 Tssr145247 620 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs107763099
MGI SNP Detail		 Chr17:56259042 Tssr145247 586 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215705754
MGI SNP Detail		 Chr17:56259125 Tssr145247 503 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs33656359
MGI SNP Detail		 Chr17:56259276 Tssr145247 352 bp upstream
 SNP A/T T T A A A T A A T T T A T
rs251628645
MGI SNP Detail		 Chr17:56259685 Ebi3 within coordinates of
Tssr145247 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213797717
MGI SNP Detail		 Chr17:56259794 Ebi3 within coordinates of
Tssr145247 95 bp downstream
Tssr145252 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108584499
MGI SNP Detail		 Chr17:56259975 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 276 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs248345626
MGI SNP Detail		 Chr17:56259982 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 283 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217481800
MGI SNP Detail		 Chr17:56260032 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 333 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239776681
MGI SNP Detail		 Chr17:56260033 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 334 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263566468
MGI SNP Detail		 Chr17:56260043 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 344 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs108806465
MGI SNP Detail		 Chr17:56260098 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 399 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs107714072
MGI SNP Detail		 Chr17:56260107 Ebi3 within coordinates of
Rr340009 within coordinates of
Tssr145247 408 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236933837
MGI SNP Detail		 Chr17:56260277 Ebi3 within coordinates of
Tssr145247 578 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33122996
MGI SNP Detail		 Chr17:56260386 Ebi3 within coordinates of
Tssr145247 687 bp downstream
 SNP C/T C C C T C
rs578306402
MGI SNP Detail		 Chr17:56260475 Ebi3 within coordinates of
Tssr145247 776 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261100913
MGI SNP Detail		 Chr17:56260538 Ebi3 within coordinates of
Tssr145247 839 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs228447700
MGI SNP Detail		 Chr17:56260562 Ebi3 within coordinates of
Tssr145247 863 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs246310730
MGI SNP Detail		 Chr17:56260565 Ebi3 within coordinates of
Tssr145247 866 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs265494090
MGI SNP Detail		 Chr17:56260596 Ebi3 within coordinates of
Tssr145247 897 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581849107
MGI SNP Detail		 Chr17:56260625 Ebi3 within coordinates of
Tssr145247 926 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585871753
MGI SNP Detail		 Chr17:56260626 Ebi3 within coordinates of
Tssr145247 927 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579938144
MGI SNP Detail		 Chr17:56260657 Ebi3 within coordinates of
Tssr145247 958 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583853778
MGI SNP Detail		 Chr17:56260694 Ebi3 within coordinates of
Tssr145247 995 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213688745
MGI SNP Detail		 Chr17:56260797 Ebi3 within coordinates of
Tssr145247 1098 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224484016
MGI SNP Detail		 Chr17:56260812 Ebi3 within coordinates of
Tssr145247 1113 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585965829
MGI SNP Detail		 Chr17:56260828 Ebi3 within coordinates of
Tssr145247 1129 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47432345
MGI SNP Detail		 Chr17:56260836 Ebi3 within coordinates of
Tssr145247 1137 bp downstream
 SNP C/T C C C C C C T C C C T C C T C
rs108803519
MGI SNP Detail		 Chr17:56260852 Ebi3 within coordinates of
Tssr145247 1153 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs50955177
MGI SNP Detail		 Chr17:56260870 Ebi3 within coordinates of
Tssr145247 1171 bp downstream
 SNP G/T G G G G G G T G G G T G G T G
rs48036461
MGI SNP Detail		 Chr17:56260897 Ebi3 within coordinates of
Tssr145247 1198 bp downstream
Tssr145256 within coordinates of
 SNP G/T G G G G G G T G G G G G G G G
rs216609189
MGI SNP Detail		 Chr17:56261109 Ebi3 within coordinates of
Tssr145247 1410 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs237368921
MGI SNP Detail		 Chr17:56261114 Ebi3 within coordinates of
Tssr145247 1415 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108032659
MGI SNP Detail		 Chr17:56261115 Ebi3 within coordinates of
Tssr145247 1416 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218541137
MGI SNP Detail		 Chr17:56261128 Ebi3 within coordinates of
Tssr145247 1429 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs236868537
MGI SNP Detail		 Chr17:56261209 Ebi3 within coordinates of
Tssr145247 1510 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255028895
MGI SNP Detail		 Chr17:56261256 Ebi3 within coordinates of
Tssr145247 1557 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51911916
MGI SNP Detail		 Chr17:56261282 Ebi3 within coordinates of
Tssr145247 1583 bp downstream
 SNP A/C A A A A A A C A A A C A A C A
rs248769211
MGI SNP Detail		 Chr17:56261313 Ebi3 within coordinates of
Tssr145247 1614 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263101489
MGI SNP Detail		 Chr17:56261330 Ebi3 within coordinates of
Tssr145247 1631 bp downstream
Tssr145257 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49084831
MGI SNP Detail		 Chr17:56261409 Ebi3 within coordinates of
Tssr145247 1710 bp downstream
 SNP A/C A A A A A A C A A A C A A C A
rs108312816
MGI SNP Detail		 Chr17:56261558 Ebi3 within coordinates of
Tssr145247 1859 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A
rs52162476
MGI SNP Detail		 Chr17:56261592 Ebi3 within coordinates of
Tssr145247 1893 bp downstream
 SNP C/G C C C C C C G C C C G C C G C
rs254604053
MGI SNP Detail		 Chr17:56261634 Ebi3 within coordinates of
Tssr145247 1935 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224466223
MGI SNP Detail		 Chr17:56261670 Ebi3 within coordinates of
Tssr145247 1971 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49399790
MGI SNP Detail		 Chr17:56261688 Ebi3 within coordinates of
Tssr145247 1989 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
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Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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