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Mouse SNP Summary
Symbol
Name
ID 		Tssr145535
transcription start site region 145535
MGI:6073302

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Showing SNP(s) 1 - 31 of 31

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585319786
MGI SNP Detail		 Chr17:63188487 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 1901 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs108558489
MGI SNP Detail		 Chr17:63188783 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1605 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs212369845
MGI SNP Detail		 Chr17:63189011 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1377 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230849976
MGI SNP Detail		 Chr17:63189032 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1356 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs107597190
MGI SNP Detail		 Chr17:63189124 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1264 bp upstream
Tssr149007 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs107841664
MGI SNP Detail		 Chr17:63189125 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1263 bp upstream
Tssr149007 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs240003757
MGI SNP Detail		 Chr17:63189144 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1244 bp upstream
Tssr149007 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259564316
MGI SNP Detail		 Chr17:63189170 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 1218 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs107825343
MGI SNP Detail		 Chr17:63189565 Cpgi9409 within coordinates of
Gm64917 within coordinates of
Rr340084 within coordinates of
Tssr145535 823 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs237592015
MGI SNP Detail		 Chr17:63189844 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 544 bp upstream
Tssr149011 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs108525588
MGI SNP Detail		 Chr17:63189884 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 504 bp upstream
Tssr149011 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs217895163
MGI SNP Detail		 Chr17:63189929 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 459 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241923145
MGI SNP Detail		 Chr17:63190145 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 243 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C
rs265851897
MGI SNP Detail		 Chr17:63190155 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 233 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T C T T T T T T T T T T T T T T
rs233671968
MGI SNP Detail		 Chr17:63190224 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 164 bp upstream
 SNP C/T T C C C C C C C T C C C C C C T C C C C C C C C T T C C T C C C C C C C C C C T C C C C C
rs247372461
MGI SNP Detail		 Chr17:63190285 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 103 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C A A C C C C C C C C C C C C C C
rs259625205
MGI SNP Detail		 Chr17:63190338 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 50 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C C T T T T T T T T T T T T T T
rs33221790
MGI SNP Detail		 Chr17:63190568 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 174 bp downstream
 SNP A/G A G G G
rs108426107
MGI SNP Detail		 Chr17:63190657 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 263 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs212332943
MGI SNP Detail		 Chr17:63190677 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 283 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs229525058
MGI SNP Detail		 Chr17:63190842 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 448 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C G G C C C C C C C C C C C C C C
rs254193270
MGI SNP Detail		 Chr17:63191364 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 970 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50265707
MGI SNP Detail		 Chr17:63191367 Cpgi9409 within coordinates of
Rr340084 within coordinates of
Tssr145535 973 bp downstream
 SNP A/T A T T
rs238073515
MGI SNP Detail		 Chr17:63191633 Tssr145535 1239 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258330152
MGI SNP Detail		 Chr17:63191669 Tssr145535 1275 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213750265
MGI SNP Detail		 Chr17:63191947 Tssr145535 1553 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231395678
MGI SNP Detail		 Chr17:63191986 Tssr145535 1592 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250497386
MGI SNP Detail		 Chr17:63192254 Tssr145535 1860 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs107622638
MGI SNP Detail		 Chr17:63192310 Tssr145535 1916 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs237071404
MGI SNP Detail		 Chr17:63192363 Tssr145535 1969 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260155248
MGI SNP Detail		 Chr17:63192390 Tssr145535 1996 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 31 of 31
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory