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Mouse SNP Summary
Symbol
Name
ID 		Tssr146762
transcription start site region 146762
MGI:6074529

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249558039
MGI SNP Detail		 Chr17:24906854 Syngr3 within coordinates of
Tssr146762 2000 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263219610
MGI SNP Detail		 Chr17:24906916 Syngr3 within coordinates of
Tssr146762 1938 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231222420
MGI SNP Detail		 Chr17:24906937 Syngr3 within coordinates of
Tssr146762 1917 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250911288
MGI SNP Detail		 Chr17:24906952 Syngr3 within coordinates of
Tssr146762 1902 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213045881
MGI SNP Detail		 Chr17:24906954 Syngr3 within coordinates of
Tssr146762 1900 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs587069963
MGI SNP Detail		 Chr17:24907045 Syngr3 within coordinates of
Tssr146762 1809 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223432712
MGI SNP Detail		 Chr17:24907081 Syngr3 within coordinates of
Tssr146762 1773 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247306657
MGI SNP Detail		 Chr17:24907193 Syngr3 within coordinates of
Tssr146762 1661 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216517074
MGI SNP Detail		 Chr17:24907250 Syngr3 within coordinates of
Tssr146762 1604 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262871933
MGI SNP Detail		 Chr17:24907344 Syngr3 within coordinates of
Tssr146762 1510 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108490369
MGI SNP Detail		 Chr17:24907371 Syngr3 within coordinates of
Tssr146762 1483 bp downstream
 SNP C/T C T
rs237631647
MGI SNP Detail		 Chr17:24907448 Syngr3 within coordinates of
Tssr146762 1406 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29538905
MGI SNP Detail		 Chr17:24907592 Syngr3 within coordinates of
Tssr146762 1262 bp downstream
 SNP C/T C T C C C
rs217951164
MGI SNP Detail		 Chr17:24907663 Syngr3 within coordinates of
Tssr146762 1191 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255534923
MGI SNP Detail		 Chr17:24907708 Syngr3 within coordinates of
Tssr146762 1146 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222916364
MGI SNP Detail		 Chr17:24907720 Syngr3 within coordinates of
Tssr146762 1134 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246909128
MGI SNP Detail		 Chr17:24907723 Syngr3 within coordinates of
Tssr146762 1131 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265598418
MGI SNP Detail		 Chr17:24908077 Syngr3 within coordinates of
Tssr146762 777 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29527558
MGI SNP Detail		 Chr17:24908099 Syngr3 within coordinates of
Tssr146762 755 bp downstream
 SNP A/G A G A
rs246037266
MGI SNP Detail		 Chr17:24908116 Syngr3 within coordinates of
Tssr146762 738 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254811097
MGI SNP Detail		 Chr17:24908157 Syngr3 within coordinates of
Tssr146762 697 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33347740
MGI SNP Detail		 Chr17:24908159 Syngr3 within coordinates of
Tssr146762 695 bp downstream
 SNP G/T T G T T T
rs387503755
MGI SNP Detail		 Chr17:24908160 Syngr3 within coordinates of
Tssr146762 694 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C
rs247570008
MGI SNP Detail		 Chr17:24908202 Syngr3 within coordinates of
Tssr146762 652 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs216577353
MGI SNP Detail		 Chr17:24908225 Syngr3 within coordinates of
Tssr146762 629 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232896897
MGI SNP Detail		 Chr17:24908311 Syngr3 within coordinates of
Tssr146762 543 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252281192
MGI SNP Detail		 Chr17:24908347 Syngr3 within coordinates of
Tssr146762 507 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215088234
MGI SNP Detail		 Chr17:24908357 Syngr3 within coordinates of
Tssr146762 497 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235910236
MGI SNP Detail		 Chr17:24908415 Syngr3 within coordinates of
Tssr146762 439 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250102374
MGI SNP Detail		 Chr17:24908582 Cpgi8738 within coordinates of
Syngr3 within coordinates of
Tssr146762 272 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211704710
MGI SNP Detail		 Chr17:24908634 Cpgi8738 within coordinates of
Syngr3 within coordinates of
Tssr146762 220 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236158444
MGI SNP Detail		 Chr17:24908838 Cpgi8738 within coordinates of
Syngr3 within coordinates of
Tssr146762 16 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254114895
MGI SNP Detail		 Chr17:24908964 Cpgi8738 within coordinates of
Tssr146762 103 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249077264
MGI SNP Detail		 Chr17:24909006 Cpgi8738 within coordinates of
Tssr146762 145 bp upstream
 SNP C/T C T
rs241404553
MGI SNP Detail		 Chr17:24909009 Cpgi8738 within coordinates of
Tssr146762 148 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259048403
MGI SNP Detail		 Chr17:24909025 Cpgi8738 within coordinates of
Tssr146762 164 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223597414
MGI SNP Detail		 Chr17:24909050 Cpgi8738 within coordinates of
Tssr146762 189 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237916202
MGI SNP Detail		 Chr17:24909084 Cpgi8738 within coordinates of
Tssr146762 223 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs254695875
MGI SNP Detail		 Chr17:24909163 Cpgi8738 within coordinates of
Tssr146762 302 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218003699
MGI SNP Detail		 Chr17:24909173 Cpgi8738 within coordinates of
Tssr146762 312 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258620736
MGI SNP Detail		 Chr17:24909184 Cpgi8738 within coordinates of
Tssr146762 323 bp upstream
 SNP C/T C T
rs259180956
MGI SNP Detail		 Chr17:24909421 Tssr146762 560 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs232284006
MGI SNP Detail		 Chr17:24909444 Tssr146762 583 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs107744660
MGI SNP Detail		 Chr17:24909479 Tssr146762 618 bp upstream
 SNP A/G G A
rs247338136
MGI SNP Detail		 Chr17:24909508 Tssr146762 647 bp upstream
 SNP A/G A G
rs262785126
MGI SNP Detail		 Chr17:24909515 Tssr146762 654 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256640267
MGI SNP Detail		 Chr17:24909605 Tssr146762 744 bp upstream
 SNP A/G A G
rs230190352
MGI SNP Detail		 Chr17:24909616 Tssr146762 755 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244209533
MGI SNP Detail		 Chr17:24909626 Tssr146762 765 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211765620
MGI SNP Detail		 Chr17:24909634 Tssr146762 773 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236042652
MGI SNP Detail		 Chr17:24909683 Tssr146762 822 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48118636
MGI SNP Detail		 Chr17:24909687 Tssr146762 826 bp upstream
 SNP G G G G G
rs216896247
MGI SNP Detail		 Chr17:24909826 Tssr146762 965 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108185429
MGI SNP Detail		 Chr17:24909861 Tssr146762 1000 bp upstream
 SNP G G G
rs50894384
MGI SNP Detail		 Chr17:24909897 Tssr146762 1036 bp upstream
 SNP T T T T T
rs223711630
MGI SNP Detail		 Chr17:24909971 Tssr146762 1110 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231771819
MGI SNP Detail		 Chr17:24910129 Tssr146762 1268 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249243602
MGI SNP Detail		 Chr17:24910266 Tssr146762 1405 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs578266619
MGI SNP Detail		 Chr17:24910418 Tssr146762 1557 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33485115
MGI SNP Detail		 Chr17:24910424 Tssr146762 1563 bp upstream
 SNP C/T C C C T C C C
rs33550988
MGI SNP Detail		 Chr17:24910440 Tssr146762 1579 bp upstream
 SNP A/G G G G A G G G
rs264133341
MGI SNP Detail		 Chr17:24910466 Tssr146762 1605 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107606429
MGI SNP Detail		 Chr17:24910517 Tssr146762 1656 bp upstream
 SNP G/T T T T T T T T G G G G G G G T T G T G T T T G T T T T T G G T T T G T T
rs580844602
MGI SNP Detail		 Chr17:24910544 Tssr146762 1683 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225413780
MGI SNP Detail		 Chr17:24910554 Tssr146762 1693 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108501696
MGI SNP Detail		 Chr17:24910571 Tssr146762 1710 bp upstream
 SNP A/C C C C C C C C C C C C C A A A A A A A C C C A C C C C A C C C C C A C C C C C A A C C C C C C C C C C C C
rs108050246
MGI SNP Detail		 Chr17:24910583 Tssr146762 1722 bp upstream
 SNP C/T C C C C C C C C C C C C T T T T T T T C C C T C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs107807122
MGI SNP Detail		 Chr17:24910595 Tssr146762 1734 bp upstream
 SNP A/G/T G G G G G G G G G G G G T T T T T T T G G G T G G G G T G G G G G T G G G G G T T G G G G G G G A G G G G
rs255979476
MGI SNP Detail		 Chr17:24910656 Tssr146762 1795 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51192830
MGI SNP Detail		 Chr17:24910708 Tssr146762 1847 bp upstream
 SNP G G G
rs46203594
MGI SNP Detail		 Chr17:24910758 Tssr146762 1897 bp upstream
 SNP C/T C C C C C C C C C C C T T T T T T T C C C T C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs52121172
MGI SNP Detail		 Chr17:24910784 Tssr146762 1923 bp upstream
 SNP A/G A A G A
rs108540355
MGI SNP Detail		 Chr17:24910803 Tssr146762 1942 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G
rs234448298
MGI SNP Detail		 Chr17:24910810 Tssr146762 1949 bp upstream
 SNP G/T G T
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Showing SNP(s) 1 - 74 of 74
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory