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Mouse SNP Summary
Symbol
Name
ID
Tssr146790
transcription start site region 146790
MGI:6074557

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240829304
MGI SNP Detail
Chr17:25102880 Nubp2 within coordinates of
Tssr146790 1994 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs258504708
MGI SNP Detail
Chr17:25102906 Nubp2 within coordinates of
Tssr146790 1968 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33458783
MGI SNP Detail
Chr17:25102932 Nubp2 within coordinates of
Tssr146790 1942 bp downstream
SNP A/G G A G A
rs254247816
MGI SNP Detail
Chr17:25103050 Nubp2 within coordinates of
Tssr146790 1824 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261576676
MGI SNP Detail
Chr17:25103088 Nubp2 within coordinates of
Tssr146790 1786 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578341519
MGI SNP Detail
Chr17:25103207 Nubp2 within coordinates of
Tssr146790 1667 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs3155850
MGI SNP Detail
Chr17:25103245 Nubp2 within coordinates of
Tssr146790 1629 bp downstream
SNP C/G C G
rs3155851
MGI SNP Detail
Chr17:25103308 Nubp2 within coordinates of
Tssr146790 1566 bp downstream
SNP C/T C C C C T
rs33195988
MGI SNP Detail
Chr17:25103362 Nubp2 within coordinates of
Tssr146790 1512 bp downstream
SNP A/T T A T A
rs232741389
MGI SNP Detail
Chr17:25103381 Nubp2 within coordinates of
Tssr146790 1493 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244481348
MGI SNP Detail
Chr17:25103417 Nubp2 within coordinates of
Tssr146790 1457 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213915095
MGI SNP Detail
Chr17:25103573 Nubp2 within coordinates of
Tssr146790 1301 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33104217
MGI SNP Detail
Chr17:25103582 Nubp2 within coordinates of
Tssr146790 1292 bp downstream
SNP A/G A G A G
rs3153947
MGI SNP Detail
Chr17:25103640 Nubp2 within coordinates of
Tssr146790 1234 bp downstream
SNP G/T T G G T G
rs3155852
MGI SNP Detail
Chr17:25103665 Nubp2 within coordinates of
Tssr146790 1209 bp downstream
SNP C/G G G C G G C
rs33462876
MGI SNP Detail
Chr17:25103693 Nubp2 within coordinates of
Tssr146790 1181 bp downstream
SNP A/G A G A G
rs254813585
MGI SNP Detail
Chr17:25103726 Nubp2 within coordinates of
Tssr146790 1148 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222274121
MGI SNP Detail
Chr17:25103760 Nubp2 within coordinates of
Tssr146790 1114 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240770066
MGI SNP Detail
Chr17:25103853 Nubp2 within coordinates of
Tssr146790 1021 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220859038
MGI SNP Detail
Chr17:25103885 Nubp2 within coordinates of
Tssr146790 989 bp downstream
SNP A/C A C
rs258610356
MGI SNP Detail
Chr17:25103888 Nubp2 within coordinates of
Tssr146790 986 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222282733
MGI SNP Detail
Chr17:25103892 Nubp2 within coordinates of
Tssr146790 982 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs33398735
MGI SNP Detail
Chr17:25103965 Nubp2 within coordinates of
Tssr146790 909 bp downstream
SNP G/T G T G T
rs264660482
MGI SNP Detail
Chr17:25103987 Nubp2 within coordinates of
Tssr146790 887 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233931130
MGI SNP Detail
Chr17:25104011 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 863 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48272258
MGI SNP Detail
Chr17:25104026 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 848 bp downstream
SNP A A A
rs258045682
MGI SNP Detail
Chr17:25104058 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 816 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs3153948
MGI SNP Detail
Chr17:25104077 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 797 bp downstream
SNP A/G A A G A A G
rs244423998
MGI SNP Detail
Chr17:25104088 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 786 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs3153949
MGI SNP Detail
Chr17:25104165 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 709 bp downstream
SNP C/T C C T C C T
rs3155853
MGI SNP Detail
Chr17:25104229 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 645 bp downstream
SNP A/G A G
rs3155854
MGI SNP Detail
Chr17:25104275 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 599 bp downstream
SNP A/G A A G A A G
rs218867231
MGI SNP Detail
Chr17:25104350 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 524 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235261597
MGI SNP Detail
Chr17:25104355 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 519 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A C A A A A
rs253337284
MGI SNP Detail
Chr17:25104356 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 518 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3153950
MGI SNP Detail
Chr17:25104675 Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 199 bp downstream
SNP C/T T C
rs234384756
MGI SNP Detail
Chr17:25104798 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 76 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262577574
MGI SNP Detail
Chr17:25104914 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 31 bp upstream
Tssr146791 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222842326
MGI SNP Detail
Chr17:25105008 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr143109 within coordinates of
Tssr146790 125 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228677985
MGI SNP Detail
Chr17:25105052 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 169 bp upstream
SNP A/G G A
rs245397082
MGI SNP Detail
Chr17:25105063 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 180 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255657072
MGI SNP Detail
Chr17:25105115 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 232 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs107769372
MGI SNP Detail
Chr17:25105139 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 256 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs107934689
MGI SNP Detail
Chr17:25105152 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 269 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs3155855
MGI SNP Detail
Chr17:25105190 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 307 bp upstream
SNP C/T T C C T C
rs228592799
MGI SNP Detail
Chr17:25105240 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Tssr146790 357 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G
rs252452865
MGI SNP Detail
Chr17:25105302 Cpgi8747 within coordinates of
Nubp2 within coordinates of
Rr339336 within coordinates of
Rr405096 within coordinates of
Tssr146790 419 bp upstream
Tssr146792 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs46922298
MGI SNP Detail
Chr17:25105471 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Rr405096 within coordinates of
Tssr146790 588 bp upstream
SNP T T T
rs3153951
MGI SNP Detail
Chr17:25105534 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Rr405096 within coordinates of
Tssr146790 651 bp upstream
SNP A/G A A G A G A A A A A A G G G G G G G G A G G G G A G G A A A A G G G A G G G G A A G A A A G G A A G G
rs3155856
MGI SNP Detail
Chr17:25105542 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Rr405096 within coordinates of
Tssr146790 659 bp upstream
SNP A/G G G G A G A G G G G G G A A A A A A A A G A A A A G A A G G G G A A A G A A A A G G A G G G A G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3153952
MGI SNP Detail
Chr17:25105555 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Tssr146790 672 bp upstream
SNP A/G A G
rs234316868
MGI SNP Detail
Chr17:25105715 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr143110 within coordinates of
Tssr146790 832 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258214262
MGI SNP Detail
Chr17:25105732 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr143110 within coordinates of
Tssr146790 849 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3153953
MGI SNP Detail
Chr17:25105772 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 889 bp upstream
SNP C/G G G G G C
rs33353027
MGI SNP Detail
Chr17:25105874 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 991 bp upstream
SNP C/G G C G G C C C G G
rs261140820
MGI SNP Detail
Chr17:25105903 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1020 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T C T T T T
rs222838306
MGI SNP Detail
Chr17:25105919 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1036 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs3155858
MGI SNP Detail
Chr17:25105957 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1074 bp upstream
SNP C/G C C C G
rs3155859
MGI SNP Detail
Chr17:25106065 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1182 bp upstream
SNP A/G A A G
rs3153954
MGI SNP Detail
Chr17:25106144 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1261 bp upstream
SNP C C
rs3153955
MGI SNP Detail
Chr17:25106158 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1275 bp upstream
SNP C/T T T C
rs262354376
MGI SNP Detail
Chr17:25106255 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1372 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108034773
MGI SNP Detail
Chr17:25106266 Cpgi8747 within coordinates of
Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1383 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs3155860
MGI SNP Detail
Chr17:25106484 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1601 bp upstream
SNP A/C C C C C A
rs3153956
MGI SNP Detail
Chr17:25106515 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1632 bp upstream
SNP C/T T T T T C
rs3155861
MGI SNP Detail
Chr17:25106531 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1648 bp upstream
SNP A/G A G G
rs228393498
MGI SNP Detail
Chr17:25106618 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1735 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247064563
MGI SNP Detail
Chr17:25106804 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1921 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs107966445
MGI SNP Detail
Chr17:25106823 Rr339336 within coordinates of
Spsb3 within coordinates of
Tssr146790 1940 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 69 of 69

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory