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Mouse SNP Summary
Symbol
Name
ID 		Tssr146794
transcription start site region 146794
MGI:6074561

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs107731612
MGI SNP Detail		 Chr17:25112151 Eme2 within coordinates of
Tssr146794 1870 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C T C C C C
rs3155880
MGI SNP Detail		 Chr17:25112387 Eme2 within coordinates of
Tssr146794 1634 bp downstream
 SNP C/T C C T C C T
rs3155881
MGI SNP Detail		 Chr17:25112391 Eme2 within coordinates of
Tssr146794 1630 bp downstream
 SNP C/T T T C T T C
rs3155882
MGI SNP Detail		 Chr17:25112429 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 1592 bp downstream
 SNP A/C A A A C A A C C
rs229224564
MGI SNP Detail		 Chr17:25112630 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 1391 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs3155884
MGI SNP Detail		 Chr17:25112698 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 1323 bp downstream
 SNP C/T C C C T C C T T
rs33784598
MGI SNP Detail		 Chr17:25112993 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 1028 bp downstream
 SNP C/G G G G C C C C
rs3153968
MGI SNP Detail		 Chr17:25113000 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 1021 bp downstream
 SNP C/T C C C C C C C T C C C C C T C T T T C
rs231818726
MGI SNP Detail		 Chr17:25113028 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 993 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251280358
MGI SNP Detail		 Chr17:25113030 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 991 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs213968045
MGI SNP Detail		 Chr17:25113032 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 989 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235162352
MGI SNP Detail		 Chr17:25113074 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 947 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs3153969
MGI SNP Detail		 Chr17:25113095 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 926 bp downstream
 SNP C/T C T T
rs212400931
MGI SNP Detail		 Chr17:25113168 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 853 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236768937
MGI SNP Detail		 Chr17:25113295 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 726 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3155885
MGI SNP Detail		 Chr17:25113387 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 634 bp downstream
 SNP A/C C C C C C C C C C C C C A C A A A C
rs3155886
MGI SNP Detail		 Chr17:25113499 Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 522 bp downstream
 SNP A/T T T T T T T T A T T T T T A T A A A T
rs248303635
MGI SNP Detail		 Chr17:25113506 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 515 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs33693987
MGI SNP Detail		 Chr17:25113557 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 464 bp downstream
 SNP C/T C T C T T C
rs222394079
MGI SNP Detail		 Chr17:25113582 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 439 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242228564
MGI SNP Detail		 Chr17:25113584 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 437 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253968660
MGI SNP Detail		 Chr17:25113881 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 140 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229193101
MGI SNP Detail		 Chr17:25114001 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 20 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33784597
MGI SNP Detail		 Chr17:25114007 Cpgi8748 within coordinates of
Eme2 within coordinates of
Rr339337 within coordinates of
Tssr146794 14 bp downstream
 SNP G/T G G G G G G T G G G G G G G G
rs33784596
MGI SNP Detail		 Chr17:25114080 Cpgi8748 within coordinates of
Rr339337 within coordinates of
Tssr146794 29 bp upstream
 SNP C/G G G G G G G C G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240827804
MGI SNP Detail		 Chr17:25114192 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 141 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs3155887
MGI SNP Detail		 Chr17:25114234 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 183 bp upstream
 SNP G/T T T T T T T T T T T T T G T G G G T
rs231518193
MGI SNP Detail		 Chr17:25114249 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 198 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256180103
MGI SNP Detail		 Chr17:25114261 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 210 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33784595
MGI SNP Detail		 Chr17:25114287 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 236 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs221350542
MGI SNP Detail		 Chr17:25114406 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 355 bp upstream
 SNP C/G G C
rs213474848
MGI SNP Detail		 Chr17:25114497 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr143114 within coordinates of
Tssr146794 446 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228975051
MGI SNP Detail		 Chr17:25114663 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 612 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3155888
MGI SNP Detail		 Chr17:25114746 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 695 bp upstream
 SNP C/G C C C C C C C G C C C C C G C G G G C
rs217117132
MGI SNP Detail		 Chr17:25114793 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 742 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3155889
MGI SNP Detail		 Chr17:25114955 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 904 bp upstream
 SNP C/G G G G G G G C G G G G G C G C C C G
rs254801384
MGI SNP Detail		 Chr17:25114990 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 939 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217640580
MGI SNP Detail		 Chr17:25115219 Cpgi8748 within coordinates of
Mrps34 within coordinates of
Rr339337 within coordinates of
Tssr146794 1168 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238148821
MGI SNP Detail		 Chr17:25115307 Cpgi8748 within coordinates of
Rr339337 within coordinates of
Tssr146794 1256 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3155890
MGI SNP Detail		 Chr17:25115311 Cpgi8748 within coordinates of
Rr339337 within coordinates of
Tssr146794 1260 bp upstream
 SNP A/G A A A G G G A A G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G
rs222700328
MGI SNP Detail		 Chr17:25115347 Cpgi8748 within coordinates of
Rr339337 within coordinates of
Tssr146794 1296 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245258297
MGI SNP Detail		 Chr17:25115389 Cpgi8748 within coordinates of
Rr339337 within coordinates of
Tssr146794 1338 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248202547
MGI SNP Detail		 Chr17:25115821 Cpgi8748 within coordinates of
Nme3 within coordinates of
Rr339337 within coordinates of
Tssr146794 1770 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33784594
MGI SNP Detail		 Chr17:25115845 Cpgi8748 within coordinates of
Nme3 within coordinates of
Rr339337 within coordinates of
Tssr146794 1794 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs13468997
MGI SNP Detail		 Chr17:25115858 Cpgi8748 within coordinates of
Nme3 within coordinates of
Rr339337 within coordinates of
Tssr146794 1807 bp upstream
 SNP C/T C C T C C C C C C T T T T C T C C C T
rs258069288
MGI SNP Detail		 Chr17:25115891 Cpgi8748 within coordinates of
Nme3 within coordinates of
Rr339337 within coordinates of
Tssr146794 1840 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 46 of 46
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory