About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr147344
transcription start site region 147344
MGI:6075111

<< first < prev1 next > last >>
Showing SNP(s) 1 - 52 of 52

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235918131
MGI SNP Detail		 Chr17:32383722 Notch3 within coordinates of
Tssr147344 2000 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250184290
MGI SNP Detail		 Chr17:32383737 Notch3 within coordinates of
Tssr147344 1985 bp downstream
 SNP C/T T T T T T C T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs222470223
MGI SNP Detail		 Chr17:32383769 Notch3 within coordinates of
Tssr147344 1953 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235784988
MGI SNP Detail		 Chr17:32383770 Notch3 within coordinates of
Tssr147344 1952 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255537002
MGI SNP Detail		 Chr17:32383808 Notch3 within coordinates of
Tssr147344 1914 bp downstream
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs224618005
MGI SNP Detail		 Chr17:32383846 Notch3 within coordinates of
Tssr147344 1876 bp downstream
 SNP C/T T T T T T C T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs246881838
MGI SNP Detail		 Chr17:32383934 Notch3 within coordinates of
Tssr147344 1788 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108567812
MGI SNP Detail		 Chr17:32383985 Notch3 within coordinates of
Tssr147343 within coordinates of
Tssr147344 1737 bp downstream
 SNP A/C C A
rs265183937
MGI SNP Detail		 Chr17:32384228 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1494 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223497136
MGI SNP Detail		 Chr17:32384231 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1491 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108151406
MGI SNP Detail		 Chr17:32384285 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1437 bp downstream
 SNP A/G G A G
rs254758465
MGI SNP Detail		 Chr17:32384356 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1366 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223711938
MGI SNP Detail		 Chr17:32384534 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1188 bp downstream
 SNP C/T C T
rs247286636
MGI SNP Detail		 Chr17:32384611 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1111 bp downstream
 SNP A/T A A A A A T A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs263120589
MGI SNP Detail		 Chr17:32384705 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 1017 bp downstream
 SNP C/T C C C C C T C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs232989827
MGI SNP Detail		 Chr17:32384783 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 939 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250670920
MGI SNP Detail		 Chr17:32384854 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 868 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215157238
MGI SNP Detail		 Chr17:32384881 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 841 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229640769
MGI SNP Detail		 Chr17:32384919 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 803 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243988822
MGI SNP Detail		 Chr17:32384960 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 762 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246298099
MGI SNP Detail		 Chr17:32385222 Cpgi8964 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 500 bp downstream
 SNP A/G A G
rs236163149
MGI SNP Detail		 Chr17:32385308 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 414 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255475805
MGI SNP Detail		 Chr17:32385350 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 372 bp downstream
 SNP C/T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs263787594
MGI SNP Detail		 Chr17:32385403 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 319 bp downstream
 SNP A/T A T
rs241497651
MGI SNP Detail		 Chr17:32385592 Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 130 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs107866378
MGI SNP Detail		 Chr17:32385719 Cpgi8965 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 3 bp downstream
 SNP A/G G A
rs223656696
MGI SNP Detail		 Chr17:32385815 Cpgi8965 within coordinates of
Notch3 within coordinates of
Rr339597 within coordinates of
Tssr147344 69 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235917488
MGI SNP Detail		 Chr17:32386059 Cpgi8965 within coordinates of
Rr339597 within coordinates of
Tssr147344 313 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579443915
MGI SNP Detail		 Chr17:32386172 Rr339597 within coordinates of
Tssr147344 426 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248996773
MGI SNP Detail		 Chr17:32386311 Rr339597 within coordinates of
Tssr147344 565 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224385862
MGI SNP Detail		 Chr17:32386371 Rr339597 within coordinates of
Tssr147344 625 bp upstream
 SNP A/C C A
rs242979606
MGI SNP Detail		 Chr17:32386482 Tssr147344 736 bp upstream
 SNP C/T T C
rs587051554
MGI SNP Detail		 Chr17:32386550 Tssr147344 804 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108747581
MGI SNP Detail		 Chr17:32386561 Tssr147344 815 bp upstream
 SNP A/G G G G G G G G A G G G G G G G G G G G A G G G A G G G G G G G G G A G G G G A G
rs265560709
MGI SNP Detail		 Chr17:32386600 Tssr147344 854 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232243860
MGI SNP Detail		 Chr17:32386760 Tssr147344 1014 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245850121
MGI SNP Detail		 Chr17:32386813 Tssr147344 1067 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262750142
MGI SNP Detail		 Chr17:32386866 Tssr147344 1120 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224201104
MGI SNP Detail		 Chr17:32386893 Tssr147344 1147 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580531869
MGI SNP Detail		 Chr17:32386920 Tssr147344 1174 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243936153
MGI SNP Detail		 Chr17:32387105 Tssr147344 1359 bp upstream
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A G G A A A A A A A G A A A A
rs216386455
MGI SNP Detail		 Chr17:32387143 Tssr147344 1397 bp upstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C T C C C C C T C T C C
rs228981562
MGI SNP Detail		 Chr17:32387157 Tssr147344 1411 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252047008
MGI SNP Detail		 Chr17:32387297 Tssr147344 1551 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216941624
MGI SNP Detail		 Chr17:32387305 Tssr147344 1559 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260686437
MGI SNP Detail		 Chr17:32387341 Tssr147344 1595 bp upstream
 SNP A/G A G
rs262168275
MGI SNP Detail		 Chr17:32387438 Tssr147344 1692 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214740146
MGI SNP Detail		 Chr17:32387514 Tssr147344 1768 bp upstream
 SNP A/G G G G G G A G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs230345924
MGI SNP Detail		 Chr17:32387548 Tssr147344 1802 bp upstream
 SNP A/T A A A A A T A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A T T A A A A A A A T A A A A
rs248944099
MGI SNP Detail		 Chr17:32387603 Tssr147344 1857 bp upstream
 SNP C/T T T T T T C T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222002935
MGI SNP Detail		 Chr17:32387677 Tssr147344 1931 bp upstream
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs241664257
MGI SNP Detail		 Chr17:32387722 Tssr147344 1976 bp upstream
 SNP A/G A A A A A G A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A G G A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 52 of 52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory