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Mouse SNP Summary
Symbol
Name
ID 		Tssr149650
transcription start site region 149650
MGI:6077417

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Showing SNP(s) 1 - 44 of 44

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229245264
MGI SNP Detail		 Chr17:84491246 Tssr149650 1746 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241126974
MGI SNP Detail		 Chr17:84491288 Tssr149650 1704 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs107844405
MGI SNP Detail		 Chr17:84491320 Tssr149650 1672 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108898109
MGI SNP Detail		 Chr17:84491321 Tssr149650 1671 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580288715
MGI SNP Detail		 Chr17:84491324 Tssr149650 1668 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583886462
MGI SNP Detail		 Chr17:84491336 Tssr149650 1656 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs266111707
MGI SNP Detail		 Chr17:84491352 Tssr149650 1640 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586066467
MGI SNP Detail		 Chr17:84491521 Tssr149650 1471 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580109732
MGI SNP Detail		 Chr17:84491572 Tssr149650 1420 bp downstream
Zfp36l2 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583908803
MGI SNP Detail		 Chr17:84491577 Tssr149650 1415 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228457856
MGI SNP Detail		 Chr17:84491812 Tssr149650 1180 bp downstream
Zfp36l2 within coordinates of
 SNP A/G A A A A A A A A A A G A G G G G G G A G G G A G G G G G A G G G G G
rs33535025
MGI SNP Detail		 Chr17:84492010 Tssr149650 982 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C T
rs581099141
MGI SNP Detail		 Chr17:84492032 Tssr149650 960 bp downstream
Zfp36l2 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583051341
MGI SNP Detail		 Chr17:84492205 Tssr149650 787 bp downstream
Zfp36l2 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586708342
MGI SNP Detail		 Chr17:84492591 Tssr149650 401 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs247067690
MGI SNP Detail		 Chr17:84492680 Tssr149650 312 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs29498676
MGI SNP Detail		 Chr17:84492787 Tssr149650 205 bp downstream
Zfp36l2 within coordinates of
 SNP G/T G G G T
rs108320193
MGI SNP Detail		 Chr17:84492921 Tssr149650 71 bp downstream
Zfp36l2 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108567071
MGI SNP Detail		 Chr17:84492986 Tssr149650 6 bp downstream
Zfp36l2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A G G G A G G A A A A G A A A A A A G A A A A A A A A A
rs585098133
MGI SNP Detail		 Chr17:84493021 Tssr149650 6 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C
rs579381208
MGI SNP Detail		 Chr17:84493057 Cpgi9565 within coordinates of
Tssr149650 42 bp upstream
Tssr149651 within coordinates of
Zfp36l2 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107952286
MGI SNP Detail		 Chr17:84493267 Cpgi9565 within coordinates of
Tssr149650 252 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254887606
MGI SNP Detail		 Chr17:84493268 Cpgi9565 within coordinates of
Tssr149650 253 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212482243
MGI SNP Detail		 Chr17:84493388 Cpgi9565 within coordinates of
Tssr149650 373 bp upstream
Zfp36l2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs236745219
MGI SNP Detail		 Chr17:84493427 Cpgi9565 within coordinates of
Tssr149650 412 bp upstream
Tssr149652 within coordinates of
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585590706
MGI SNP Detail		 Chr17:84493441 Cpgi9565 within coordinates of
Tssr149650 426 bp upstream
Tssr149652 within coordinates of
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584949652
MGI SNP Detail		 Chr17:84493454 Cpgi9565 within coordinates of
Tssr149650 439 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255039637
MGI SNP Detail		 Chr17:84493458 Cpgi9565 within coordinates of
Tssr149650 443 bp upstream
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C C C T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs216926492
MGI SNP Detail		 Chr17:84493475 Cpgi9565 within coordinates of
Tssr149650 460 bp upstream
Tssr149653 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A A A G A A G G G G A G G G G G G A G G G G G G G G G G G G
rs108227979
MGI SNP Detail		 Chr17:84493664 Cpgi9565 within coordinates of
Tssr149650 649 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233774524
MGI SNP Detail		 Chr17:84493784 Cpgi9565 within coordinates of
Tssr149650 769 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A A A G A A G G G G A G G G G G G A G G G G G G G G G G G
rs251476677
MGI SNP Detail		 Chr17:84493805 Cpgi9565 within coordinates of
Tssr149650 790 bp upstream
Tssr149656 within coordinates of
Zfp36l2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs33635152
MGI SNP Detail		 Chr17:84494015 Cpgi9565 within coordinates of
Tssr149650 1000 bp upstream
Tssr149657 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G G G A
rs231556982
MGI SNP Detail		 Chr17:84494252 Cpgi9565 within coordinates of
Tssr149650 1237 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261624276
MGI SNP Detail		 Chr17:84494280 Cpgi9565 within coordinates of
Tssr149650 1265 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578581681
MGI SNP Detail		 Chr17:84494363 Cpgi9565 within coordinates of
Tssr149650 1348 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220482157
MGI SNP Detail		 Chr17:84494450 Cpgi9565 within coordinates of
Tssr149650 1435 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs107880872
MGI SNP Detail		 Chr17:84494480 Cpgi9565 within coordinates of
Tssr149650 1465 bp upstream
Tssr149666 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244004802
MGI SNP Detail		 Chr17:84494502 Cpgi9565 within coordinates of
Tssr149650 1487 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108358558
MGI SNP Detail		 Chr17:84494633 Cpgi9565 within coordinates of
Tssr149650 1618 bp upstream
Tssr149669 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582337558
MGI SNP Detail		 Chr17:84494686 Tssr149650 1671 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264394245
MGI SNP Detail		 Chr17:84494726 Tssr149650 1711 bp upstream
Zfp36l2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222543550
MGI SNP Detail		 Chr17:84494742 Tssr149650 1727 bp upstream
Zfp36l2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C G G C G G G C C C C G C C C C C C G C C C C C C C C C C C
rs241198205
MGI SNP Detail		 Chr17:84494778 Tssr149650 1763 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 44 of 44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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