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Mouse SNP Summary
Symbol
Name
ID 		Tssr149665
transcription start site region 149665
MGI:6077432

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586708342
MGI SNP Detail		 Chr17:84492591 Rr340271 within coordinates of
Tssr149665 1795 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs247067690
MGI SNP Detail		 Chr17:84492680 Rr340271 within coordinates of
Tssr149665 1706 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs29498676
MGI SNP Detail		 Chr17:84492787 Rr340271 within coordinates of
Tssr149665 1599 bp downstream
Zfp36l2 within coordinates of
 SNP G/T G G G T
rs108320193
MGI SNP Detail		 Chr17:84492921 Rr340271 within coordinates of
Tssr149665 1465 bp downstream
Zfp36l2 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108567071
MGI SNP Detail		 Chr17:84492986 Rr340271 within coordinates of
Tssr149665 1400 bp downstream
Zfp36l2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A G G G A G G A A A A G A A A A A A G A A A A A A A A A
rs585098133
MGI SNP Detail		 Chr17:84493021 Rr340271 within coordinates of
Tssr149665 1365 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C
rs579381208
MGI SNP Detail		 Chr17:84493057 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149651 within coordinates of
Tssr149665 1329 bp downstream
Zfp36l2 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107952286
MGI SNP Detail		 Chr17:84493267 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 1119 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254887606
MGI SNP Detail		 Chr17:84493268 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 1118 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212482243
MGI SNP Detail		 Chr17:84493388 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 998 bp downstream
Zfp36l2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs236745219
MGI SNP Detail		 Chr17:84493427 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149652 within coordinates of
Tssr149665 959 bp downstream
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs585590706
MGI SNP Detail		 Chr17:84493441 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149652 within coordinates of
Tssr149665 945 bp downstream
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584949652
MGI SNP Detail		 Chr17:84493454 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 932 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255039637
MGI SNP Detail		 Chr17:84493458 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 928 bp downstream
Zfp36l2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C C C T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs216926492
MGI SNP Detail		 Chr17:84493475 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149653 within coordinates of
Tssr149665 911 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A A A G A A G G G G A G G G G G G A G G G G G G G G G G G G
rs108227979
MGI SNP Detail		 Chr17:84493664 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 722 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233774524
MGI SNP Detail		 Chr17:84493784 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 602 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A A A G A A G G G G A G G G G G G A G G G G G G G G G G G
rs251476677
MGI SNP Detail		 Chr17:84493805 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149656 within coordinates of
Tssr149665 581 bp downstream
Zfp36l2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs33635152
MGI SNP Detail		 Chr17:84494015 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149657 within coordinates of
Tssr149665 371 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G A
rs231556982
MGI SNP Detail		 Chr17:84494252 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 134 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261624276
MGI SNP Detail		 Chr17:84494280 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 106 bp downstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578581681
MGI SNP Detail		 Chr17:84494363 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 23 bp downstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220482157
MGI SNP Detail		 Chr17:84494450 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 18 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs107880872
MGI SNP Detail		 Chr17:84494480 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 48 bp upstream
Tssr149666 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244004802
MGI SNP Detail		 Chr17:84494502 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 70 bp upstream
Zfp36l2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108358558
MGI SNP Detail		 Chr17:84494633 Cpgi9565 within coordinates of
Rr340271 within coordinates of
Tssr149665 201 bp upstream
Tssr149669 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582337558
MGI SNP Detail		 Chr17:84494686 Rr340271 within coordinates of
Tssr149665 254 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264394245
MGI SNP Detail		 Chr17:84494726 Rr340271 within coordinates of
Tssr149665 294 bp upstream
Zfp36l2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222543550
MGI SNP Detail		 Chr17:84494742 Rr340271 within coordinates of
Tssr149665 310 bp upstream
Zfp36l2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C G G C G G G C C C C G C C C C C C G C C C C C C C C C C C
rs241198205
MGI SNP Detail		 Chr17:84494778 Rr340271 within coordinates of
Tssr149665 346 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258962081
MGI SNP Detail		 Chr17:84495062 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 630 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T T T G T T T G G G T G G G G G G T G G G G G G G G G G G
rs33494349
MGI SNP Detail		 Chr17:84495149 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 717 bp upstream
Zfp36l2 within coordinates of
 SNP C/T T T C
rs108147419
MGI SNP Detail		 Chr17:84495163 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 731 bp upstream
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250450345
MGI SNP Detail		 Chr17:84495168 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 736 bp upstream
Tssr149670 within coordinates of
Zfp36l2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264780713
MGI SNP Detail		 Chr17:84495188 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 756 bp upstream
Zfp36l2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227221807
MGI SNP Detail		 Chr17:84495189 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 757 bp upstream
Zfp36l2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs108504938
MGI SNP Detail		 Chr17:84495191 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Tssr149665 759 bp upstream
Zfp36l2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260546240
MGI SNP Detail		 Chr17:84495410 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Rr405496 within coordinates of
Tssr149665 978 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217047705
MGI SNP Detail		 Chr17:84495517 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Rr405496 within coordinates of
Tssr149665 1085 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233896651
MGI SNP Detail		 Chr17:84495570 Cpgi9566 within coordinates of
Rr340271 within coordinates of
Rr405496 within coordinates of
Tssr149665 1138 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A G G A G G A A A A A A A A A A G A A A A A A A G A A A
rs108627055
MGI SNP Detail		 Chr17:84495582 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Rr405496 within coordinates of
Tssr149665 1150 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245546992
MGI SNP Detail		 Chr17:84495613 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1181 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214649149
MGI SNP Detail		 Chr17:84495684 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1252 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238332842
MGI SNP Detail		 Chr17:84495685 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1253 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256425879
MGI SNP Detail		 Chr17:84495725 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1293 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108907664
MGI SNP Detail		 Chr17:84495769 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1337 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220219195
MGI SNP Detail		 Chr17:84495778 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1346 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240343816
MGI SNP Detail		 Chr17:84495779 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1347 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263789099
MGI SNP Detail		 Chr17:84495849 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1417 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222691174
MGI SNP Detail		 Chr17:84495875 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1443 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241227789
MGI SNP Detail		 Chr17:84496048 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr146046 within coordinates of
Tssr149665 1616 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258998699
MGI SNP Detail		 Chr17:84496230 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1798 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs220128955
MGI SNP Detail		 Chr17:84496267 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1835 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29751685
MGI SNP Detail		 Chr17:84496276 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1844 bp upstream
 SNP G/T G G G G G T G G T G G T G
rs29751684
MGI SNP Detail		 Chr17:84496290 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1858 bp upstream
 SNP A/G G A A A A A A A A A
rs261804321
MGI SNP Detail		 Chr17:84496344 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1912 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227851168
MGI SNP Detail		 Chr17:84496367 Cpgi9566 within coordinates of
Gm56881 within coordinates of
Rr340271 within coordinates of
Tssr149665 1935 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 57 of 57
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory