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Mouse SNP Summary
Symbol
Name
ID 		Tssr149706
transcription start site region 149706
MGI:6077473

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216434620
MGI SNP Detail		 Chr17:85918591 Six3os1 within coordinates of
Tssr149706 1891 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233485373
MGI SNP Detail		 Chr17:85918596 Six3os1 within coordinates of
Tssr149706 1886 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33221036
MGI SNP Detail		 Chr17:85918727 Six3os1 within coordinates of
Tssr149706 1755 bp downstream
 SNP A/G A A G G G A
rs214413961
MGI SNP Detail		 Chr17:85918766 Six3os1 within coordinates of
Tssr149706 1716 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236187900
MGI SNP Detail		 Chr17:85918781 Six3os1 within coordinates of
Tssr149706 1701 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50731189
MGI SNP Detail		 Chr17:85918839 Six3os1 within coordinates of
Tssr149706 1643 bp downstream
 SNP C/T C C C C C C C C T T C C T C C T C
rs221670142
MGI SNP Detail		 Chr17:85918973 Six3os1 within coordinates of
Tssr149706 1509 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108143024
MGI SNP Detail		 Chr17:85919010 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1472 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261039635
MGI SNP Detail		 Chr17:85919094 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1388 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33553462
MGI SNP Detail		 Chr17:85919131 Gm55781 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1351 bp downstream
 SNP A/G A A G G
rs33105834
MGI SNP Detail		 Chr17:85919140 Gm55781 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1342 bp downstream
 SNP C/T C T T T C C C C C T T C C T C C T T
rs259382703
MGI SNP Detail		 Chr17:85919223 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1259 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33416166
MGI SNP Detail		 Chr17:85919250 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1232 bp downstream
 SNP A/G A A A A G G A G G G A A G G A G G A A
rs243618014
MGI SNP Detail		 Chr17:85919284 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1198 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107956435
MGI SNP Detail		 Chr17:85919356 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1126 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108885169
MGI SNP Detail		 Chr17:85919420 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 1062 bp downstream
 SNP A/T A T
rs259748331
MGI SNP Detail		 Chr17:85919537 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 945 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258764823
MGI SNP Detail		 Chr17:85919567 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 915 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50982241
MGI SNP Detail		 Chr17:85919604 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 878 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs245195061
MGI SNP Detail		 Chr17:85919656 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 826 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214277831
MGI SNP Detail		 Chr17:85919693 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 789 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237851577
MGI SNP Detail		 Chr17:85919699 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 783 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259476551
MGI SNP Detail		 Chr17:85919734 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 748 bp downstream
 SNP A/G A G
rs212159733
MGI SNP Detail		 Chr17:85919816 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 666 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs587013970
MGI SNP Detail		 Chr17:85919881 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 601 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234782044
MGI SNP Detail		 Chr17:85919903 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 579 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255330650
MGI SNP Detail		 Chr17:85919910 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 572 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222900806
MGI SNP Detail		 Chr17:85919938 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 544 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234955881
MGI SNP Detail		 Chr17:85919987 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 495 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252979468
MGI SNP Detail		 Chr17:85919993 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 489 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223769871
MGI SNP Detail		 Chr17:85920019 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 463 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246242427
MGI SNP Detail		 Chr17:85920039 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 443 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231772249
MGI SNP Detail		 Chr17:85920042 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 440 bp downstream
 SNP A/G A G
rs220527963
MGI SNP Detail		 Chr17:85920065 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 417 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248079238
MGI SNP Detail		 Chr17:85920081 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 401 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245914943
MGI SNP Detail		 Chr17:85920105 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 377 bp downstream
 SNP G/T T G
rs107932813
MGI SNP Detail		 Chr17:85920115 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 367 bp downstream
 SNP A/G G A
rs239006437
MGI SNP Detail		 Chr17:85920184 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 298 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256006098
MGI SNP Detail		 Chr17:85920215 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 267 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33450583
MGI SNP Detail		 Chr17:85920229 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 253 bp downstream
 SNP A/G A A A G G A G A G A A A A A G A A
rs242104627
MGI SNP Detail		 Chr17:85920268 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 214 bp downstream
 SNP C/T T C
rs212806272
MGI SNP Detail		 Chr17:85920274 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 208 bp downstream
 SNP A/G A G
rs234950285
MGI SNP Detail		 Chr17:85920356 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 126 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248925810
MGI SNP Detail		 Chr17:85920462 Cpgi9587 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 20 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108509100
MGI SNP Detail		 Chr17:85920797 Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr149706 305 bp upstream
 SNP G/T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs234814731
MGI SNP Detail		 Chr17:85920897 Gm55782 within coordinates of
Rr340291 within coordinates of
Six3os1 within coordinates of
Tssr146085 within coordinates of
Tssr149706 405 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108562722
MGI SNP Detail		 Chr17:85921200 Cpgi9588 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 708 bp upstream
 SNP C/G G C
rs244566019
MGI SNP Detail		 Chr17:85921309 Cpgi9588 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 817 bp upstream
 SNP G/T T G
rs108016486
MGI SNP Detail		 Chr17:85921350 Cpgi9588 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 858 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs215331019
MGI SNP Detail		 Chr17:85921486 Cpgi9588 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 994 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236495647
MGI SNP Detail		 Chr17:85921567 Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1075 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52031980
MGI SNP Detail		 Chr17:85921645 Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1153 bp upstream
 SNP C/G G G G G G G C G G G G G G G G
rs220979075
MGI SNP Detail		 Chr17:85921715 Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1223 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108441254
MGI SNP Detail		 Chr17:85922043 Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1551 bp upstream
 SNP A/T A T
rs108245718
MGI SNP Detail		 Chr17:85922174 Cpgi9589 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1682 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221190894
MGI SNP Detail		 Chr17:85922218 Cpgi9589 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1726 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs238834840
MGI SNP Detail		 Chr17:85922329 Cpgi9589 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1837 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33394257
MGI SNP Detail		 Chr17:85922366 Cpgi9589 within coordinates of
Rr340291 within coordinates of
Six3 within coordinates of
Six3os1 within coordinates of
Tssr149706 1874 bp upstream
 SNP A/G G G G G A A G A G A G G G G A G G
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory