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Mouse SNP Summary
Symbol
Name
ID
Tssr149799
transcription start site region 149799
MGI:6077566

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222384024
MGI SNP Detail
Chr17:88371656 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1776 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242370768
MGI SNP Detail
Chr17:88371763 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1669 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107601849
MGI SNP Detail
Chr17:88371872 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1560 bp downstream
SNP C/T T C
rs229255873
MGI SNP Detail
Chr17:88371967 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1465 bp downstream
SNP A/C A C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108046492
MGI SNP Detail
Chr17:88372036 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1396 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C T C C C T T C C C
rs108366999
MGI SNP Detail
Chr17:88372122 Cpgi9636 within coordinates of
Fbxo11 within coordinates of
Rr340317 within coordinates of
Tssr149799 1310 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108025273
MGI SNP Detail
Chr17:88372750 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 682 bp downstream
SNP C/G C C G G C C G G C G G G G C C G G G G G G G G G G G G G G C C G G G G G G G G G
rs108279738
MGI SNP Detail
Chr17:88373383 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 49 bp downstream
SNP T T
rs108803409
MGI SNP Detail
Chr17:88373389 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 43 bp downstream
SNP T T
rs580984222
MGI SNP Detail
Chr17:88373395 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 37 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584403777
MGI SNP Detail
Chr17:88373401 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 31 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578300836
MGI SNP Detail
Chr17:88373407 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 25 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T T T C T T T T C T T T
rs582646304
MGI SNP Detail
Chr17:88373503 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256166174
MGI SNP Detail
Chr17:88373569 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 54 bp upstream
SNP G/T G G T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G
rs33166334
MGI SNP Detail
Chr17:88373640 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 125 bp upstream
SNP A/G A G G G G A G
rs108721245
MGI SNP Detail
Chr17:88373695 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 180 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248950777
MGI SNP Detail
Chr17:88373696 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 181 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265458776
MGI SNP Detail
Chr17:88373809 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 294 bp upstream
SNP A/G A G
rs108344899
MGI SNP Detail
Chr17:88373827 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr405528 within coordinates of
Tssr149799 312 bp upstream
SNP G/T G T
rs252900609
MGI SNP Detail
Chr17:88373992 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Rr370332 within coordinates of
Tssr149799 477 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C C T C C C
rs33395145
MGI SNP Detail
Chr17:88374028 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 513 bp upstream
SNP C/T T C C C
rs238241043
MGI SNP Detail
Chr17:88374066 Cpgi9636 within coordinates of
Rr340317 within coordinates of
Tssr149799 551 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262621601
MGI SNP Detail
Chr17:88374113 Rr340317 within coordinates of
Tssr149799 598 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33718267
MGI SNP Detail
Chr17:88374207 Rr340317 within coordinates of
Tssr149799 692 bp upstream
SNP G/T T T G G
rs47383046
MGI SNP Detail
Chr17:88374208 Rr340317 within coordinates of
Tssr149799 693 bp upstream
SNP G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245239608
MGI SNP Detail
Chr17:88374226 Rr340317 within coordinates of
Tssr149799 711 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249739370
MGI SNP Detail
Chr17:88374283 Rr340317 within coordinates of
Tssr149799 768 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108075510
MGI SNP Detail
Chr17:88374331 Rr340317 within coordinates of
Tssr149799 816 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108092458
MGI SNP Detail
Chr17:88374333 Rr340317 within coordinates of
Tssr149799 818 bp upstream
SNP A/C/G G G G G G G G G G G G G G G G G G G G A G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108575375
MGI SNP Detail
Chr17:88374360 Rr340317 within coordinates of
Tssr149799 845 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs48274992
MGI SNP Detail
Chr17:88374443 Rr340317 within coordinates of
Tssr149799 928 bp upstream
SNP G/T G G G G G G T G G G G G G G G
rs244091554
MGI SNP Detail
Chr17:88374599 Rr340317 within coordinates of
Tssr149799 1084 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265049217
MGI SNP Detail
Chr17:88374605 Rr340317 within coordinates of
Tssr149799 1090 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228541748
MGI SNP Detail
Chr17:88374616 Rr340317 within coordinates of
Tssr149799 1101 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52180728
MGI SNP Detail
Chr17:88374625 Rr340317 within coordinates of
Tssr149799 1110 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs579093078
MGI SNP Detail
Chr17:88374691 Rr340317 within coordinates of
Tssr149799 1176 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259609653
MGI SNP Detail
Chr17:88374728 Rr340317 within coordinates of
Tssr149799 1213 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228012729
MGI SNP Detail
Chr17:88374742 Rr340317 within coordinates of
Tssr149799 1227 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245719823
MGI SNP Detail
Chr17:88374763 Rr340317 within coordinates of
Tssr149799 1248 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214861136
MGI SNP Detail
Chr17:88374772 Rr340317 within coordinates of
Tssr149799 1257 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240503700
MGI SNP Detail
Chr17:88374837 Tssr149799 1322 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47217122
MGI SNP Detail
Chr17:88374848 Tssr149799 1333 bp upstream
SNP G/T G G G G G G G G G G T G G T G
rs214525519
MGI SNP Detail
Chr17:88374957 Tssr149799 1442 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235641311
MGI SNP Detail
Chr17:88375000 Tssr149799 1485 bp upstream
SNP A/G A A A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249803809
MGI SNP Detail
Chr17:88375046 Rr333911 within coordinates of
Tssr149799 1531 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223657908
MGI SNP Detail
Chr17:88375069 Rr333911 within coordinates of
Tssr149799 1554 bp upstream
SNP A/G A A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235668386
MGI SNP Detail
Chr17:88375070 Rr333911 within coordinates of
Tssr149799 1555 bp upstream
SNP A/T T T T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs107703170
MGI SNP Detail
Chr17:88375102 Rr333911 within coordinates of
Tssr149799 1587 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108807415
MGI SNP Detail
Chr17:88375109 Rr333911 within coordinates of
Tssr149799 1594 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs107610298
MGI SNP Detail
Chr17:88375132 Rr333911 within coordinates of
Tssr149799 1617 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262333236
MGI SNP Detail
Chr17:88375137 Rr333911 within coordinates of
Tssr149799 1622 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107873583
MGI SNP Detail
Chr17:88375161 Rr333911 within coordinates of
Tssr149799 1646 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108177054
MGI SNP Detail
Chr17:88375192 Rr333911 within coordinates of
Tssr149799 1677 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259170941
MGI SNP Detail
Chr17:88375245 Rr333911 within coordinates of
Tssr149799 1730 bp upstream
SNP A/T T A
rs108281116
MGI SNP Detail
Chr17:88375257 Rr333911 within coordinates of
Tssr149799 1742 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108846354
MGI SNP Detail
Chr17:88375336 Rr333911 within coordinates of
Tssr149799 1821 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108861565
MGI SNP Detail
Chr17:88375343 Rr333911 within coordinates of
Tssr149799 1828 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs107705205
MGI SNP Detail
Chr17:88375485 Tssr149799 1970 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 58 of 58

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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