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Mouse SNP Summary
Symbol
Name
ID
Tssr150645
transcription start site region 150645
MGI:6078412

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229059279
MGI SNP Detail
Alliance Variant
Chr18:36769680 Ankhd1 Intron
Tssr150645 1947 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs247693389
MGI SNP Detail
Alliance Variant
Chr18:36769697 Ankhd1 Intron
Tssr150645 1930 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs30008649
MGI SNP Detail
Alliance Variant
Chr18:36769850 Ankhd1 Intron
Tssr150645 1777 bp upstream
SNP A/G A G A G A A A G G A A G A A G A
rs232697178
MGI SNP Detail
Alliance Variant
Chr18:36769881 Ankhd1 Intron
Tssr150645 1746 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578429509
MGI SNP Detail
Alliance Variant
Chr18:36769926 Ankhd1 Intron
Tssr150645 1701 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs31797021
MGI SNP Detail
Alliance Variant
Chr18:36769954 Ankhd1 Intron
Tssr150645 1673 bp upstream
SNP C/T C T C C C C C C C C C C
rs580548634
MGI SNP Detail
Alliance Variant
Chr18:36769965 Ankhd1 Intron
Tssr150645 1662 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584664250
MGI SNP Detail
Alliance Variant
Chr18:36769969 Ankhd1 Intron
Tssr150645 1658 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578681793
MGI SNP Detail
Alliance Variant
Chr18:36769970 Ankhd1 Intron
Tssr150645 1657 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs582648972
MGI SNP Detail
Alliance Variant
Chr18:36769973 Ankhd1 Intron
Tssr150645 1654 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T T T T T
rs586037302
MGI SNP Detail
Alliance Variant
Chr18:36769974 Ankhd1 Intron
Tssr150645 1653 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578879226
MGI SNP Detail
Alliance Variant
Chr18:36769977 Ankhd1 Intron
Tssr150645 1650 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs582924957
MGI SNP Detail
Alliance Variant
Chr18:36769978 Ankhd1 Intron
Tssr150645 1649 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585840075
MGI SNP Detail
Alliance Variant
Chr18:36769981 Ankhd1 Intron
Tssr150645 1646 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs579597872
MGI SNP Detail
Alliance Variant
Chr18:36769982 Ankhd1 Intron
Tssr150645 1645 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582911951
MGI SNP Detail
Alliance Variant
Chr18:36769985 Ankhd1 Intron
Tssr150645 1642 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs585829387
MGI SNP Detail
Alliance Variant
Chr18:36769986 Ankhd1 Intron
Tssr150645 1641 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579841911
MGI SNP Detail
Alliance Variant
Chr18:36769989 Ankhd1 Intron
Tssr150645 1638 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs583368417
MGI SNP Detail
Alliance Variant
Chr18:36769990 Ankhd1 Intron
Tssr150645 1637 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587390252
MGI SNP Detail
Alliance Variant
Chr18:36769993 Ankhd1 Intron
Tssr150645 1634 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs581224336
MGI SNP Detail
Alliance Variant
Chr18:36769997 Ankhd1 Intron
Tssr150645 1630 bp upstream
SNP G/T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T G T T T T T T T T T T T
rs31797020
MGI SNP Detail
Alliance Variant
Chr18:36770002 Ankhd1 Intron
Tssr150645 1625 bp upstream
SNP A/T A T T A A T T A T T T A A T A T
rs229939885
MGI SNP Detail
Alliance Variant
Chr18:36770141 Ankhd1 Intron
Tssr150645 1486 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs250565845
MGI SNP Detail
Alliance Variant
Chr18:36770165 Ankhd1 Intron
Tssr150645 1462 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T A A
rs216818280
MGI SNP Detail
Alliance Variant
Chr18:36770188 Ankhd1 Intron
Tssr150645 1439 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236583070
MGI SNP Detail
Alliance Variant
Chr18:36770366 Ankhd1 Intron
Tssr150645 1261 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258497631
MGI SNP Detail
Alliance Variant
Chr18:36770425 Ankhd1 Intron
Tssr150645 1202 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30301361
MGI SNP Detail
Alliance Variant
Chr18:36770462 Ankhd1 Intron
Tssr150645 1165 bp upstream
SNP C/T T C C T C T T T C C T T C T T C T
rs243061748
MGI SNP Detail
Alliance Variant
Chr18:36770512 Ankhd1 Intron
Tssr150645 1115 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30161373
MGI SNP Detail
Alliance Variant
Chr18:36770556 Ankhd1 Intron
Tssr150645 1071 bp upstream
SNP A/G A G G A G A A A G G A G G G A A G A G
rs217984406
MGI SNP Detail
Alliance Variant
Chr18:36770707 Ankhd1 Intron
Tssr150645 920 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31797019
MGI SNP Detail
Alliance Variant
Chr18:36770739 Ankhd1 Intron
Tssr150645 888 bp upstream
SNP A/G G G G G G G G G G G A G G A G
rs29872237
MGI SNP Detail
Alliance Variant
Chr18:36770768 Ankhd1 Intron
Tssr150645 859 bp upstream
SNP A/G G A A G A
rs258653017
MGI SNP Detail
Alliance Variant
Chr18:36770864 Ankhd1 Intron
Tssr150645 763 bp upstream
SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A T A A A A
rs239017305
MGI SNP Detail
Alliance Variant
Chr18:36771082 Ankhd1 Intron
Tssr150645 545 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263291441
MGI SNP Detail
Alliance Variant
Chr18:36771083 Ankhd1 Intron
Tssr150645 544 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233450579
MGI SNP Detail
Alliance Variant
Chr18:36771097 Ankhd1 Intron
Tssr150645 530 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs46016774
MGI SNP Detail
Alliance Variant
Chr18:36771109 Ankhd1 Intron
Tssr150645 518 bp upstream
SNP C/G C C C G C C G G C C C C C C C C C G G G C G C G C G G C C C C C G C C C C C C G C G C G G C C G C C C C
rs215628901
MGI SNP Detail
Alliance Variant
Chr18:36771118 Ankhd1 Intron
Tssr150645 509 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs31797018
MGI SNP Detail
Alliance Variant
Chr18:36771269 Ankhd1 Coding-Synonymous
Tssr150645 358 bp upstream
SNP A/T A A A A A A T A A A T A A T A
rs216772349
MGI SNP Detail
Alliance Variant
Chr18:36771515 Ankhd1 Intron
Tssr150645 112 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236521845
MGI SNP Detail
Alliance Variant
Chr18:36771855 Ankhd1 Intron
Tssr150645 217 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30221798
MGI SNP Detail
Alliance Variant
Chr18:36772068 Ankhd1 Intron
Tssr150645 430 bp downstream
SNP G/T G G T G
rs217002115
MGI SNP Detail
Alliance Variant
Chr18:36772252 Ankhd1 Intron
Tssr150645 614 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31797017
MGI SNP Detail
Alliance Variant
Chr18:36772257 Ankhd1 Intron
Tssr150645 619 bp downstream
SNP G/T G G G G G G T G G G G G G G G
rs31797016
MGI SNP Detail
Alliance Variant
Chr18:36772268 Ankhd1 Intron
Tssr150645 630 bp downstream
SNP A/G A A A A A A A A A A G A A G A
rs217931152
MGI SNP Detail
Alliance Variant
Chr18:36772277 Ankhd1 Intron
Tssr150645 639 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230713344
MGI SNP Detail
Alliance Variant
Chr18:36772349 Ankhd1 Intron
Tssr150645 711 bp downstream
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G A G G G G
rs252346180
MGI SNP Detail
Alliance Variant
Chr18:36772356 Ankhd1 Intron
Tssr150645 718 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222380254
MGI SNP Detail
Alliance Variant
Chr18:36772358 Ankhd1 Intron
Tssr150645 720 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244861654
MGI SNP Detail
Alliance Variant
Chr18:36772402 Ankhd1 Intron
Tssr150645 764 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31797015
MGI SNP Detail
Alliance Variant
Chr18:36772430 Ankhd1 Intron
Tssr150645 792 bp downstream
SNP A/G A A A A A A G A A A A A A A A
rs265652773
MGI SNP Detail
Alliance Variant
Chr18:36772639 Ankhd1 Intron
Tssr150645 1001 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246145796
MGI SNP Detail
Alliance Variant
Chr18:36772671 Ankhd1 Intron
Tssr150645 1033 bp downstream
SNP C/T T C
rs30265418
MGI SNP Detail
Alliance Variant
Chr18:36772822 Ankhd1 Intron
Tssr150645 1184 bp downstream
SNP A/G G G A G G A
rs246258094
MGI SNP Detail
Alliance Variant
Chr18:36772885 Ankhd1 Intron
Tssr150645 1247 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A C A A A A A A A A A A A A
rs262928783
MGI SNP Detail
Alliance Variant
Chr18:36772909 Ankhd1 Intron
Tssr150645 1271 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224547380
MGI SNP Detail
Alliance Variant
Chr18:36772922 Ankhd1 Intron
Tssr150645 1284 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244621405
MGI SNP Detail
Alliance Variant
Chr18:36772945 Ankhd1 Intron
Tssr150645 1307 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29720519
MGI SNP Detail
Alliance Variant
Chr18:36773025 Ankhd1 Intron
Tssr150645 1387 bp downstream
SNP C/T C C T C C T
rs229286810
MGI SNP Detail
Alliance Variant
Chr18:36773036 Ankhd1 Intron
Tssr150645 1398 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252390757
MGI SNP Detail
Alliance Variant
Chr18:36773056 Ankhd1 Intron
Tssr150645 1418 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217357220
MGI SNP Detail
Alliance Variant
Chr18:36773094 Ankhd1 Intron
Tssr150645 1456 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236405469
MGI SNP Detail
Alliance Variant
Chr18:36773096 Ankhd1 Intron
Tssr150645 1458 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31797014
MGI SNP Detail
Alliance Variant
Chr18:36773142 Ankhd1 Intron
Tssr150645 1504 bp downstream
SNP A/G A A A A A A G A A A A A A A A
rs256093318
MGI SNP Detail
Alliance Variant
Chr18:36773225 Ankhd1 Intron
Tssr150645 1587 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs211961252
MGI SNP Detail
Alliance Variant
Chr18:36773234 Ankhd1 Intron
Tssr150645 1596 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230641308
MGI SNP Detail
Alliance Variant
Chr18:36773274 Ankhd1 Intron
Tssr150645 1636 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T
rs31796253
MGI SNP Detail
Alliance Variant
Chr18:36773456 Ankhd1 Intron
Tssr150645 1818 bp downstream
SNP A/G G G A G G G G
rs222704666
MGI SNP Detail
Alliance Variant
Chr18:36773587 Ankhd1 Intron
Tssr150645 1949 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory