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Mouse SNP Summary
Symbol
Name
ID 		Tssr154126
transcription start site region 154126
MGI:6081893

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Showing SNP(s) 1 - 51 of 51

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216795822
MGI SNP Detail		 Chr18:84103896 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1931 bp downstream
 SNP A/C C A A A A C A A A A A A C A A A C A A C C C A A C A C A C A A A C A C
rs235153368
MGI SNP Detail		 Chr18:84104306 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1521 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs253254957
MGI SNP Detail		 Chr18:84104357 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1470 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs214632032
MGI SNP Detail		 Chr18:84104364 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1463 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236485216
MGI SNP Detail		 Chr18:84104368 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1459 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261859448
MGI SNP Detail		 Chr18:84104404 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 1423 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221217402
MGI SNP Detail		 Chr18:84104510 Cpgi10336 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154122 within coordinates of
Tssr154126 1317 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50904978
MGI SNP Detail		 Chr18:84104949 Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 878 bp downstream
 SNP A/G A A G
rs252945800
MGI SNP Detail		 Chr18:84104984 Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 843 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221767624
MGI SNP Detail		 Chr18:84105012 Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 815 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239986164
MGI SNP Detail		 Chr18:84105212 Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 615 bp downstream
 SNP A/G A A A G G G G G A G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G G G A G
rs257207417
MGI SNP Detail		 Chr18:84105543 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 284 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230995504
MGI SNP Detail		 Chr18:84105551 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 276 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242976837
MGI SNP Detail		 Chr18:84105578 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 249 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G C G G G G G G G G
rs264895924
MGI SNP Detail		 Chr18:84105671 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr154126 156 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580586495
MGI SNP Detail		 Chr18:84105808 Cpgi10337 within coordinates of
Gm58899 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr152202 within coordinates of
Tssr154126 19 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227890793
MGI SNP Detail		 Chr18:84105809 Cpgi10337 within coordinates of
Gm58899 within coordinates of
Rr353212 within coordinates of
Tshz1 within coordinates of
Tssr152202 within coordinates of
Tssr154126 18 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249003188
MGI SNP Detail		 Chr18:84105901 Cpgi10337 within coordinates of
Gm58899 within coordinates of
Rr353212 within coordinates of
Tssr154126 60 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs216740477
MGI SNP Detail		 Chr18:84105987 Cpgi10337 within coordinates of
Gm58899 within coordinates of
Rr353212 within coordinates of
Tssr154126 146 bp upstream
 SNP C/G C G G G G G C G G G G G G G G G G G G G G G G G G G G G C G G G G C C G G G G G G G G G G G G G C G
rs581790090
MGI SNP Detail		 Chr18:84106092 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tssr154126 251 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C
rs228145441
MGI SNP Detail		 Chr18:84106176 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tssr154126 335 bp upstream
 SNP G/T T T G G G G G T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs246837084
MGI SNP Detail		 Chr18:84106211 Cpgi10337 within coordinates of
Rr353212 within coordinates of
Tssr152203 within coordinates of
Tssr154126 370 bp upstream
 SNP C/G G G C C C C C G C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C C G C
rs215190385
MGI SNP Detail		 Chr18:84106519 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 678 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs238381170
MGI SNP Detail		 Chr18:84106532 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 691 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256557327
MGI SNP Detail		 Chr18:84106582 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 741 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212646667
MGI SNP Detail		 Chr18:84106671 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 830 bp upstream
 SNP A/T T T A A A A A T A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A A A T A
rs234393921
MGI SNP Detail		 Chr18:84106900 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1059 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253034711
MGI SNP Detail		 Chr18:84106944 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1103 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221730156
MGI SNP Detail		 Chr18:84106977 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1136 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239716318
MGI SNP Detail		 Chr18:84107022 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1181 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251163751
MGI SNP Detail		 Chr18:84107034 Cpgi10337 within coordinates of
Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1193 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223388738
MGI SNP Detail		 Chr18:84107143 Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1302 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51602415
MGI SNP Detail		 Chr18:84107204 Ptgr3 within coordinates of
Rr353212 within coordinates of
Rr405764 within coordinates of
Tssr154126 1363 bp upstream
 SNP C C
rs261869936
MGI SNP Detail		 Chr18:84107286 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1445 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219991899
MGI SNP Detail		 Chr18:84107315 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1474 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242901983
MGI SNP Detail		 Chr18:84107347 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1506 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260793561
MGI SNP Detail		 Chr18:84107394 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1553 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228110871
MGI SNP Detail		 Chr18:84107457 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1616 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246575644
MGI SNP Detail		 Chr18:84107466 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1625 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265318584
MGI SNP Detail		 Chr18:84107495 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1654 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230476176
MGI SNP Detail		 Chr18:84107529 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1688 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49057012
MGI SNP Detail		 Chr18:84107612 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1771 bp upstream
 SNP C/T T T T C
rs212273370
MGI SNP Detail		 Chr18:84107614 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1773 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235442142
MGI SNP Detail		 Chr18:84107632 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1791 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48727724
MGI SNP Detail		 Chr18:84107700 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1859 bp upstream
 SNP C/T C C C T
rs216466857
MGI SNP Detail		 Chr18:84107701 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1860 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs46300212
MGI SNP Detail		 Chr18:84107702 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1861 bp upstream
 SNP C/T T T T C
rs250923184
MGI SNP Detail		 Chr18:84107706 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1865 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222779515
MGI SNP Detail		 Chr18:84107794 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1953 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29824537
MGI SNP Detail		 Chr18:84107808 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1967 bp upstream
 SNP A/G G A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261541662
MGI SNP Detail		 Chr18:84107810 Ptgr3 within coordinates of
Rr353212 within coordinates of
Tssr154126 1969 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 51 of 51
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory