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Mouse SNP Summary
Symbol
Name
ID 		Tssr154539
transcription start site region 154539
MGI:6082306

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36965716
MGI SNP Detail		 Chr19:6094785 D530017H19Rik within coordinates of
Gm8034 within coordinates of
Tssr154539 1874 bp upstream
 SNP A/G G G G G G G G G A G G G G G
rs37813073
MGI SNP Detail		 Chr19:6094790 D530017H19Rik within coordinates of
Gm8034 within coordinates of
Tssr154539 1869 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
rs39454667
MGI SNP Detail		 Chr19:6094813 D530017H19Rik within coordinates of
Gm8034 within coordinates of
Tssr154539 1846 bp upstream
 SNP C/T T T T T T T C T T T C T T T T
rs213371124
MGI SNP Detail		 Chr19:6094822 D530017H19Rik within coordinates of
Gm8034 within coordinates of
Tssr154539 1837 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232078988
MGI SNP Detail		 Chr19:6094880 D530017H19Rik within coordinates of
Tssr154539 1779 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260875298
MGI SNP Detail		 Chr19:6094881 D530017H19Rik within coordinates of
Tssr154539 1778 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs221318235
MGI SNP Detail		 Chr19:6094886 D530017H19Rik within coordinates of
Tssr154539 1773 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241980277
MGI SNP Detail		 Chr19:6094917 D530017H19Rik within coordinates of
Tssr154539 1742 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs261010753
MGI SNP Detail		 Chr19:6094918 D530017H19Rik within coordinates of
Tssr154539 1741 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs221187593
MGI SNP Detail		 Chr19:6094931 D530017H19Rik within coordinates of
Tssr154539 1728 bp upstream
Tssr157816 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs585338991
MGI SNP Detail		 Chr19:6094978 D530017H19Rik within coordinates of
Tssr154539 1681 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241435762
MGI SNP Detail		 Chr19:6094979 D530017H19Rik within coordinates of
Tssr154539 1680 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs579689570
MGI SNP Detail		 Chr19:6095051 D530017H19Rik within coordinates of
Tssr154539 1608 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257582818
MGI SNP Detail		 Chr19:6095096 D530017H19Rik within coordinates of
Tssr154539 1563 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220356579
MGI SNP Detail		 Chr19:6095115 D530017H19Rik within coordinates of
Tssr154539 1544 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs241605116
MGI SNP Detail		 Chr19:6095152 D530017H19Rik within coordinates of
Tssr154539 1507 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs264970539
MGI SNP Detail		 Chr19:6095231 D530017H19Rik within coordinates of
Tssr154539 1428 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37570300
MGI SNP Detail		 Chr19:6095232 D530017H19Rik within coordinates of
Tssr154539 1427 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs260495231
MGI SNP Detail		 Chr19:6095281 D530017H19Rik within coordinates of
Tssr154539 1378 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs583279522
MGI SNP Detail		 Chr19:6095290 D530017H19Rik within coordinates of
Tssr154539 1369 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs36902797
MGI SNP Detail		 Chr19:6095299 D530017H19Rik within coordinates of
Tssr154539 1360 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs259615467
MGI SNP Detail		 Chr19:6095391 D530017H19Rik within coordinates of
Tssr154539 1268 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586905899
MGI SNP Detail		 Chr19:6095513 D530017H19Rik within coordinates of
Tssr154539 1146 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs37558367
MGI SNP Detail		 Chr19:6095517 D530017H19Rik within coordinates of
Tssr154539 1142 bp upstream
 SNP C/T T T T T T T T T T C T T C T
rs245791159
MGI SNP Detail		 Chr19:6095617 D530017H19Rik within coordinates of
Tssr154539 1042 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213316403
MGI SNP Detail		 Chr19:6095742 D530017H19Rik within coordinates of
Tssr154539 917 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231884259
MGI SNP Detail		 Chr19:6095748 D530017H19Rik within coordinates of
Tssr154539 911 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249118021
MGI SNP Detail		 Chr19:6095787 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Tssr154539 872 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36527135
MGI SNP Detail		 Chr19:6095789 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Tssr154539 870 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs36854520
MGI SNP Detail		 Chr19:6095823 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 836 bp upstream
 SNP C/T T T T C T C T C T C T T C T
rs30845765
MGI SNP Detail		 Chr19:6095889 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 770 bp upstream
 SNP A/G A A G G G A G A G G A G G G G G G G G
rs38556754
MGI SNP Detail		 Chr19:6095923 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 736 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs220927326
MGI SNP Detail		 Chr19:6095928 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 731 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234918839
MGI SNP Detail		 Chr19:6095956 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 703 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30493057
MGI SNP Detail		 Chr19:6095970 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 689 bp upstream
 SNP A/T T T A A A T A T A A T A A A T A A A A
rs220339880
MGI SNP Detail		 Chr19:6096036 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 623 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C
rs244163053
MGI SNP Detail		 Chr19:6096037 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 622 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs262142237
MGI SNP Detail		 Chr19:6096038 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 621 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226677117
MGI SNP Detail		 Chr19:6096039 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 620 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31094824
MGI SNP Detail		 Chr19:6096047 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 612 bp upstream
 SNP C/T T T T T C
rs30370691
MGI SNP Detail		 Chr19:6096048 D530017H19Rik within coordinates of
Rr405817 within coordinates of
Rr543277 within coordinates of
Tssr154539 611 bp upstream
 SNP C/T T T T T C
rs227827405
MGI SNP Detail		 Chr19:6096063 D530017H19Rik within coordinates of
Rr543277 within coordinates of
Tssr154539 596 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs239751956
MGI SNP Detail		 Chr19:6096096 D530017H19Rik within coordinates of
Rr543277 within coordinates of
Rr543278 within coordinates of
Tssr154539 563 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs255180844
MGI SNP Detail		 Chr19:6096129 D530017H19Rik within coordinates of
Rr543277 within coordinates of
Tssr154539 530 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230623542
MGI SNP Detail		 Chr19:6096151 D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr543277 within coordinates of
Tssr154539 508 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252059399
MGI SNP Detail		 Chr19:6096294 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr543277 within coordinates of
Tssr154539 365 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30791898
MGI SNP Detail		 Chr19:6096323 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr543277 within coordinates of
Tssr154539 336 bp upstream
 SNP C/T T T C C C T C T C C T C C C C C C C C
rs234002476
MGI SNP Detail		 Chr19:6096339 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 320 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248786611
MGI SNP Detail		 Chr19:6096373 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 286 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs215014301
MGI SNP Detail		 Chr19:6096376 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 283 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234702154
MGI SNP Detail		 Chr19:6096379 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 280 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs581204693
MGI SNP Detail		 Chr19:6096390 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 269 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs36645787
MGI SNP Detail		 Chr19:6096407 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 252 bp upstream
 SNP G/T G G G G G G G G G T G G G
rs214600395
MGI SNP Detail		 Chr19:6096519 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Gm59262 within coordinates of
Rr370438 within coordinates of
Rr543277 within coordinates of
Tssr154539 140 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583596765
MGI SNP Detail
Alliance Variant		 Chr19:6096816 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543279 within coordinates of
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 141 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs38156534
MGI SNP Detail
Alliance Variant		 Chr19:6096909 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543279 within coordinates of
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 234 bp downstream
 SNP G/T G G G G G G G G G G T G G G G
rs37227865
MGI SNP Detail
Alliance Variant		 Chr19:6096930 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543279 within coordinates of
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 255 bp downstream
 SNP A/C C C C C C C C C C C A C C C C
rs234730022
MGI SNP Detail
Alliance Variant		 Chr19:6097004 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543279 within coordinates of
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 329 bp downstream
Tssr157817 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs36268229
MGI SNP Detail
Alliance Variant		 Chr19:6097131 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543280 within coordinates of
Syvn1 Intron
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 456 bp downstream
Tssr154542 within coordinates of
 SNP A/T T T T T T T A T T T T T T T T
rs30424789
MGI SNP Detail
Alliance Variant		 Chr19:6097230 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Syvn1 Intron
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 555 bp downstream
 SNP C/T T T T C
rs30415743
MGI SNP Detail
Alliance Variant		 Chr19:6097289 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Syvn1 Intron
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 614 bp downstream
 SNP C/T T T C C C T C T C C C C C C C C
rs251814313
MGI SNP Detail
Alliance Variant		 Chr19:6097299 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Syvn1 Intron
Syvn1 mRNA-UTR
Syvn1 Noncoding-Transcript-Variant
Tssr154539 624 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37302163
MGI SNP Detail
Alliance Variant		 Chr19:6097369 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 694 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs30516320
MGI SNP Detail
Alliance Variant		 Chr19:6097405 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Rr543283 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 730 bp downstream
 SNP C/T C C T C T
rs237891640
MGI SNP Detail
Alliance Variant		 Chr19:6097417 Cpgi10491 within coordinates of
D530017H19Rik within coordinates of
Rr543281 within coordinates of
Rr543283 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 742 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G
rs255124578
MGI SNP Detail
Alliance Variant		 Chr19:6097496 Cpgi10491 within coordinates of
Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 821 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230869341
MGI SNP Detail
Alliance Variant		 Chr19:6097545 Cpgi10491 within coordinates of
Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 870 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240920970
MGI SNP Detail
Alliance Variant		 Chr19:6097548 Cpgi10491 within coordinates of
Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 873 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264765760
MGI SNP Detail
Alliance Variant		 Chr19:6097594 Cpgi10491 within coordinates of
Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 919 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232820319
MGI SNP Detail
Alliance Variant		 Chr19:6097800 Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1125 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248772889
MGI SNP Detail
Alliance Variant		 Chr19:6097907 Rr543284 within coordinates of
Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1232 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36847173
MGI SNP Detail
Alliance Variant		 Chr19:6098173 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1498 bp downstream
 SNP A/T T T T T T T T T T T T T A T
rs37394794
MGI SNP Detail
Alliance Variant		 Chr19:6098175 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1500 bp downstream
 SNP G/T G G G G G G G G G G T G G G G
rs227986985
MGI SNP Detail
Alliance Variant		 Chr19:6098189 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1514 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244906714
MGI SNP Detail
Alliance Variant		 Chr19:6098190 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1515 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214651287
MGI SNP Detail
Alliance Variant		 Chr19:6098210 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1535 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30359425
MGI SNP Detail
Alliance Variant		 Chr19:6098245 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1570 bp downstream
 SNP G/T T G T G G G
rs256467862
MGI SNP Detail
Alliance Variant		 Chr19:6098291 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1616 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30860105
MGI SNP Detail
Alliance Variant		 Chr19:6098472 Syvn1 Intron
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1797 bp downstream
 SNP G/T T G T G G G
rs240440516
MGI SNP Detail
Alliance Variant		 Chr19:6098508 Syvn1 Coding-Synonymous
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1833 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251553230
MGI SNP Detail
Alliance Variant		 Chr19:6098574 Syvn1 Coding-Synonymous
Syvn1 Noncoding-Transcript-Variant
Tssr154539 1899 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 81 of 81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory