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Mouse SNP Summary
Symbol
Name
ID 		Tssr154754
transcription start site region 154754
MGI:6082521

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217127702
MGI SNP Detail		 Chr19:7469658 Gm58988 within coordinates of
Tssr154754 1727 bp upstream
 SNP A/C C C C C C C C C C A C C C C C C C C C C A C C A A A C C C C C C C C C C C C C C C C C C C C C C C A C
rs237571112
MGI SNP Detail		 Chr19:7469702 Gm58988 within coordinates of
Tssr154754 1683 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T
rs263204747
MGI SNP Detail		 Chr19:7469712 Gm58988 within coordinates of
Tssr154754 1673 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs213493696
MGI SNP Detail		 Chr19:7469738 Gm58988 within coordinates of
Tssr154754 1647 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239297174
MGI SNP Detail		 Chr19:7469750 Gm58988 within coordinates of
Tssr154754 1635 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249947360
MGI SNP Detail		 Chr19:7469778 Gm58988 within coordinates of
Tssr154754 1607 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219176731
MGI SNP Detail		 Chr19:7469781 Gm58988 within coordinates of
Tssr154754 1604 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs242397698
MGI SNP Detail		 Chr19:7469793 Gm58988 within coordinates of
Tssr154754 1592 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs255634766
MGI SNP Detail		 Chr19:7470051 Gm58988 within coordinates of
Tssr154754 1334 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224253339
MGI SNP Detail		 Chr19:7470063 Gm58988 within coordinates of
Tssr154754 1322 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246511728
MGI SNP Detail		 Chr19:7470257 Gm58988 within coordinates of
Tssr154754 1128 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108074145
MGI SNP Detail		 Chr19:7470288 Gm58988 within coordinates of
Tssr154754 1097 bp upstream
 SNP A/G G G G A
rs231112628
MGI SNP Detail		 Chr19:7470335 Gm58988 within coordinates of
Tssr154754 1050 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238257787
MGI SNP Detail		 Chr19:7470339 Gm58988 within coordinates of
Tssr154754 1046 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253814742
MGI SNP Detail		 Chr19:7470370 Gm58988 within coordinates of
Tssr154754 1015 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582546335
MGI SNP Detail		 Chr19:7470540 Gm58988 within coordinates of
Tssr154754 845 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs224316939
MGI SNP Detail		 Chr19:7470627 Gm58988 within coordinates of
Tssr154754 758 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246651585
MGI SNP Detail		 Chr19:7470635 Gm58988 within coordinates of
Tssr154754 750 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219195205
MGI SNP Detail		 Chr19:7470671 Gm58988 within coordinates of
Tssr154754 714 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231683434
MGI SNP Detail		 Chr19:7470919 Gm58988 within coordinates of
Tssr154754 466 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252847017
MGI SNP Detail		 Chr19:7471068 Gm58988 within coordinates of
Tssr154754 317 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs213927895
MGI SNP Detail		 Chr19:7471162 Gm58988 within coordinates of
Tssr154754 223 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs232540446
MGI SNP Detail		 Chr19:7471173 Gm58988 within coordinates of
Tssr154754 212 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249873864
MGI SNP Detail		 Chr19:7471183 Atl3 within coordinates of
Gm58988 within coordinates of
Tssr154754 202 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213118178
MGI SNP Detail		 Chr19:7471187 Atl3 within coordinates of
Gm58988 within coordinates of
Tssr154754 198 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235847023
MGI SNP Detail		 Chr19:7471198 Atl3 within coordinates of
Gm58988 within coordinates of
Tssr154754 187 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs255577862
MGI SNP Detail		 Chr19:7471251 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 134 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs586407980
MGI SNP Detail		 Chr19:7471255 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 130 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs224572860
MGI SNP Detail		 Chr19:7471256 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 129 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241156852
MGI SNP Detail		 Chr19:7471282 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 103 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36919870
MGI SNP Detail		 Chr19:7471404 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 8 bp downstream
Tssr154755 within coordinates of
 SNP A/T T T T T T T A T T T A T T T T
rs257200895
MGI SNP Detail		 Chr19:7471627 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 231 bp downstream
Tssr154756 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs223323624
MGI SNP Detail		 Chr19:7471645 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 249 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236082707
MGI SNP Detail		 Chr19:7471663 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 267 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254791502
MGI SNP Detail		 Chr19:7471745 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 349 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C G C C C C
rs218526373
MGI SNP Detail		 Chr19:7471877 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 481 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240719524
MGI SNP Detail		 Chr19:7472055 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 659 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37257368
MGI SNP Detail		 Chr19:7472064 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 668 bp downstream
 SNP C/T T T T C T C T
rs231669782
MGI SNP Detail		 Chr19:7472181 Atl3 within coordinates of
Cpgi10560 within coordinates of
Gm58988 within coordinates of
Tssr154754 785 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs257823257
MGI SNP Detail		 Chr19:7472328 Atl3 within coordinates of
Cpgi10560 within coordinates of
Tssr154754 932 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37349911
MGI SNP Detail		 Chr19:7472362 Atl3 within coordinates of
Cpgi10560 within coordinates of
Tssr154754 966 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs226262456
MGI SNP Detail		 Chr19:7472371 Atl3 within coordinates of
Cpgi10560 within coordinates of
Tssr154754 975 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243287715
MGI SNP Detail		 Chr19:7472399 Atl3 within coordinates of
Cpgi10560 within coordinates of
Tssr154754 1003 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212649598
MGI SNP Detail		 Chr19:7472492 Atl3 within coordinates of
Tssr154754 1096 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235767831
MGI SNP Detail		 Chr19:7472553 Atl3 within coordinates of
Tssr154754 1157 bp downstream
 SNP G/T G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G T G
rs255016586
MGI SNP Detail		 Chr19:7472558 Atl3 within coordinates of
Tssr154754 1162 bp downstream
 SNP G/T G G G G G G G G T G G G G G G G G T G T T G G G G G G G G G G G T G G G G G G G G G T G
rs216637372
MGI SNP Detail		 Chr19:7472771 Atl3 within coordinates of
Tssr154754 1375 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs239091725
MGI SNP Detail		 Chr19:7472949 Atl3 within coordinates of
Tssr154754 1553 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs47636437
MGI SNP Detail		 Chr19:7473053 Atl3 within coordinates of
Tssr154754 1657 bp downstream
 SNP G G
rs262051004
MGI SNP Detail		 Chr19:7473054 Atl3 within coordinates of
Tssr154754 1658 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30993655
MGI SNP Detail		 Chr19:7473080 Atl3 within coordinates of
Tssr154754 1684 bp downstream
 SNP C/T T T C
rs230085572
MGI SNP Detail		 Chr19:7473168 Atl3 within coordinates of
Tssr154754 1772 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249028704
MGI SNP Detail		 Chr19:7473220 Atl3 within coordinates of
Tssr154754 1824 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222108407
MGI SNP Detail		 Chr19:7473251 Atl3 within coordinates of
Tssr154754 1855 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240710686
MGI SNP Detail		 Chr19:7473293 Atl3 within coordinates of
Tssr154754 1897 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs264377896
MGI SNP Detail		 Chr19:7473325 Atl3 within coordinates of
Tssr154754 1929 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224145447
MGI SNP Detail		 Chr19:7473387 Atl3 within coordinates of
Tssr154754 1991 bp downstream
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T A T T T T
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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