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Mouse SNP Summary
Symbol
Name
ID 		Tssr154836
transcription start site region 154836
MGI:6082603

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250313237
MGI SNP Detail		 Chr19:8795650 Rr363768 within coordinates of
Tssr154836 1967 bp upstream
Ttc9c within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs30802272
MGI SNP Detail		 Chr19:8795700 Rr363768 within coordinates of
Tssr154836 1917 bp upstream
Ttc9c within coordinates of
 SNP C/T T T C C
rs242549939
MGI SNP Detail		 Chr19:8795724 Rr363768 within coordinates of
Tssr154836 1893 bp upstream
Ttc9c within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G C
rs252618012
MGI SNP Detail		 Chr19:8795736 Rr363768 within coordinates of
Tssr154836 1881 bp upstream
Ttc9c within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30989840
MGI SNP Detail		 Chr19:8795821 Rr363768 within coordinates of
Tssr154836 1796 bp upstream
Ttc9c within coordinates of
 SNP C/G G C G C
rs242773477
MGI SNP Detail		 Chr19:8795891 Rr363768 within coordinates of
Tssr154836 1726 bp upstream
Ttc9c within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A T A A A A
rs265380851
MGI SNP Detail		 Chr19:8796139 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1478 bp upstream
Ttc9c within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228163314
MGI SNP Detail		 Chr19:8796224 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1393 bp upstream
Ttc9c within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236926883
MGI SNP Detail		 Chr19:8796241 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1376 bp upstream
Ttc9c within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs259329834
MGI SNP Detail		 Chr19:8796329 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1288 bp upstream
Tssr158064 within coordinates of
Ttc9c within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229511658
MGI SNP Detail		 Chr19:8796486 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1131 bp upstream
Ttc9c within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245411773
MGI SNP Detail		 Chr19:8796551 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1066 bp upstream
Tssr158065 within coordinates of
Ttc9c within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30403425
MGI SNP Detail		 Chr19:8796568 Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1049 bp upstream
Ttc9c within coordinates of
 SNP C/T T C T C
rs583148547
MGI SNP Detail		 Chr19:8796592 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 1025 bp upstream
Ttc9c within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230264713
MGI SNP Detail		 Chr19:8796694 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 923 bp upstream
Tssr158068 within coordinates of
Ttc9c within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251602477
MGI SNP Detail		 Chr19:8796755 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 862 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30714541
MGI SNP Detail		 Chr19:8796775 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 842 bp upstream
 SNP A/C C A C A
rs234649399
MGI SNP Detail		 Chr19:8796941 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 676 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244296993
MGI SNP Detail		 Chr19:8797003 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 614 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216557617
MGI SNP Detail		 Chr19:8797119 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 498 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236290199
MGI SNP Detail		 Chr19:8797151 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 466 bp upstream
Tssr158069 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252574149
MGI SNP Detail		 Chr19:8797192 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 425 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224775686
MGI SNP Detail		 Chr19:8797266 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 351 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237595850
MGI SNP Detail		 Chr19:8797302 Cpgi10577 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 315 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257547048
MGI SNP Detail		 Chr19:8797651 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219759672
MGI SNP Detail		 Chr19:8797807 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 129 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237067387
MGI SNP Detail		 Chr19:8797876 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 198 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259466361
MGI SNP Detail		 Chr19:8797879 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 201 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G C C G C G G C G G G G C G G G G C G G G G G G C G G G G G G C G G G C
rs222955225
MGI SNP Detail		 Chr19:8797888 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 210 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239521509
MGI SNP Detail		 Chr19:8797891 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Rr370451 within coordinates of
Tssr154836 213 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C G G G G G G C G G G G G G G G G G G
rs265750467
MGI SNP Detail		 Chr19:8798136 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 458 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108171745
MGI SNP Detail		 Chr19:8798169 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 491 bp downstream
 SNP A/G A G G
rs256307832
MGI SNP Detail		 Chr19:8798225 Cpgi10577 within coordinates of
Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 547 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261555978
MGI SNP Detail		 Chr19:8798584 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 906 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225080348
MGI SNP Detail		 Chr19:8798599 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 921 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244236189
MGI SNP Detail		 Chr19:8798732 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1054 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216687958
MGI SNP Detail		 Chr19:8798812 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1134 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236227249
MGI SNP Detail		 Chr19:8798862 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1184 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252158605
MGI SNP Detail		 Chr19:8798894 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1216 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216846781
MGI SNP Detail		 Chr19:8798924 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1246 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235959836
MGI SNP Detail		 Chr19:8798989 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1311 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262349349
MGI SNP Detail		 Chr19:8799000 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1322 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219887139
MGI SNP Detail		 Chr19:8799018 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1340 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580005633
MGI SNP Detail		 Chr19:8799052 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1374 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs230448322
MGI SNP Detail		 Chr19:8799074 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1396 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252863442
MGI SNP Detail		 Chr19:8799183 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1505 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223101913
MGI SNP Detail		 Chr19:8799210 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1532 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239461982
MGI SNP Detail		 Chr19:8799225 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1547 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263770628
MGI SNP Detail		 Chr19:8799227 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1549 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222556056
MGI SNP Detail		 Chr19:8799244 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1566 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108197086
MGI SNP Detail		 Chr19:8799254 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1576 bp downstream
 SNP C/T C T T
rs264705728
MGI SNP Detail		 Chr19:8799264 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1586 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs225023468
MGI SNP Detail		 Chr19:8799290 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1612 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242085874
MGI SNP Detail		 Chr19:8799303 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1625 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260585700
MGI SNP Detail		 Chr19:8799377 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1699 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229207383
MGI SNP Detail		 Chr19:8799424 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1746 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs257282082
MGI SNP Detail		 Chr19:8799432 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1754 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216525472
MGI SNP Detail		 Chr19:8799455 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1777 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230101839
MGI SNP Detail		 Chr19:8799480 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1802 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251270321
MGI SNP Detail		 Chr19:8799517 Hnrnpul2 within coordinates of
Rr363768 within coordinates of
Tssr154836 1839 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
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Showing SNP(s) 1 - 60 of 60
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory