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Mouse SNP Summary
Symbol
Name
ID
Tssr154879
transcription start site region 154879
MGI:6082646

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264270446
MGI SNP Detail
Chr19:8895840 Tssr154879 1956 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221049388
MGI SNP Detail
Chr19:8896003 Tssr154879 1793 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585853528
MGI SNP Detail
Chr19:8896096 Tssr154879 1700 bp upstream
SNP C/T C C C C C C C C C T C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C T
rs579845717
MGI SNP Detail
Chr19:8896108 Tssr154879 1688 bp upstream
SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs583395205
MGI SNP Detail
Chr19:8896116 Tssr154879 1680 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586902723
MGI SNP Detail
Chr19:8896124 Tssr154879 1672 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581301694
MGI SNP Detail
Chr19:8896132 Tssr154879 1664 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583878898
MGI SNP Detail
Chr19:8896160 Tssr154879 1636 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587382420
MGI SNP Detail
Chr19:8896164 Tssr154879 1632 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580711003
MGI SNP Detail
Chr19:8896196 Tssr154879 1600 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584242077
MGI SNP Detail
Chr19:8896274 Tssr154879 1522 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs240416549
MGI SNP Detail
Chr19:8896307 Gm36629 within coordinates of
Tssr154879 1489 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs255861753
MGI SNP Detail
Chr19:8896314 Gm36629 within coordinates of
Tssr154879 1482 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226358060
MGI SNP Detail
Chr19:8896425 Gm36629 within coordinates of
Tssr154879 1371 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242603454
MGI SNP Detail
Chr19:8896618 Gm36629 within coordinates of
Tssr154879 1178 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264902549
MGI SNP Detail
Chr19:8896624 Gm36629 within coordinates of
Tssr154879 1172 bp upstream
SNP A/G A A A A A A A A A A A A A A A G A A G A A A G A A A A G A A A A A A G A A A A A A A A A A
rs233299125
MGI SNP Detail
Chr19:8896808 Gm36629 within coordinates of
Tssr154879 988 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs260235178
MGI SNP Detail
Chr19:8896818 Gm36629 within coordinates of
Tssr154879 978 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215834558
MGI SNP Detail
Chr19:8896822 Gm36629 within coordinates of
Tssr154879 974 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs4139262
MGI SNP Detail
Chr19:8896851 Gm36629 within coordinates of
Tssr154879 945 bp upstream
SNP C/T T C
rs247222432
MGI SNP Detail
Chr19:8896872 Gm36629 within coordinates of
Tssr154879 924 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213652038
MGI SNP Detail
Chr19:8896936 Gm36629 within coordinates of
Tssr154879 860 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs578355286
MGI SNP Detail
Chr19:8896985 Gm36629 within coordinates of
Tssr154879 811 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232623440
MGI SNP Detail
Chr19:8897005 Gm36629 within coordinates of
Tssr154879 791 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255400427
MGI SNP Detail
Chr19:8897054 Gm36629 within coordinates of
Tssr154879 742 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581144636
MGI SNP Detail
Chr19:8897056 Gm36629 within coordinates of
Tssr154879 740 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220760349
MGI SNP Detail
Chr19:8897143 Gm36629 within coordinates of
Tssr154879 653 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239265106
MGI SNP Detail
Chr19:8897152 Gm36629 within coordinates of
Tssr154879 644 bp upstream
SNP C/T C C C C C C C C C T C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C T
rs264009941
MGI SNP Detail
Chr19:8897240 Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 556 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220448120
MGI SNP Detail
Chr19:8897377 Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 419 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs239744209
MGI SNP Detail
Chr19:8897454 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 342 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs255785935
MGI SNP Detail
Chr19:8897467 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 329 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220400915
MGI SNP Detail
Chr19:8897518 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 278 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs244317655
MGI SNP Detail
Chr19:8897519 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 277 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262087338
MGI SNP Detail
Chr19:8897529 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 267 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234236592
MGI SNP Detail
Chr19:8897690 Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 106 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248511716
MGI SNP Detail
Chr19:8898054 B3gat3 within coordinates of
Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 244 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs259339785
MGI SNP Detail
Chr19:8898100 B3gat3 within coordinates of
Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 290 bp downstream
SNP A/G A A A A A A A A A G A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A G
rs228125339
MGI SNP Detail
Chr19:8898203 B3gat3 within coordinates of
Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 393 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245098522
MGI SNP Detail
Chr19:8898300 B3gat3 within coordinates of
Cpgi10585 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 490 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213593062
MGI SNP Detail
Chr19:8898410 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 600 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226553732
MGI SNP Detail
Chr19:8898414 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 604 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252282273
MGI SNP Detail
Chr19:8898527 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 717 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212709902
MGI SNP Detail
Chr19:8898592 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 782 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241975657
MGI SNP Detail
Chr19:8898613 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 803 bp downstream
SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260710356
MGI SNP Detail
Chr19:8898628 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 818 bp downstream
SNP C/T C C C C C C C C C T C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C T
rs215000806
MGI SNP Detail
Chr19:8898676 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 866 bp downstream
SNP A/C A A A A A A A A A C A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A C
rs233269070
MGI SNP Detail
Chr19:8898689 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 879 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249386705
MGI SNP Detail
Chr19:8898751 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 941 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220325353
MGI SNP Detail
Chr19:8898752 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 942 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241671389
MGI SNP Detail
Chr19:8898777 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 967 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261796182
MGI SNP Detail
Chr19:8898795 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 985 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226069571
MGI SNP Detail
Chr19:8898813 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 1003 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs251777583
MGI SNP Detail
Chr19:8898935 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 1125 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259283613
MGI SNP Detail
Chr19:8898988 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 1178 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228206488
MGI SNP Detail
Chr19:8899144 B3gat3 within coordinates of
Gm36629 within coordinates of
Rr363777 within coordinates of
Tssr154879 1334 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs238922826
MGI SNP Detail
Chr19:8899481 B3gat3 within coordinates of
Tssr154879 1671 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258407762
MGI SNP Detail
Chr19:8899486 B3gat3 within coordinates of
Tssr154879 1676 bp downstream
SNP A/G G G G G G G G G G A G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G A
rs231092021
MGI SNP Detail
Chr19:8899559 B3gat3 within coordinates of
Tssr154879 1749 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584634890
MGI SNP Detail
Chr19:8899752 B3gat3 within coordinates of
Tssr154879 1942 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
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Showing SNP(s) 1 - 60 of 60

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory