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Mouse SNP Summary
Symbol
Name
ID 		Tssr154956
transcription start site region 154956
MGI:6082723

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Showing SNP(s) 1 - 36 of 36

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254677462
MGI SNP Detail		 Chr19:8993702 Ahnak within coordinates of
Tssr154956 1922 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36825151
MGI SNP Detail		 Chr19:8993705 Ahnak within coordinates of
Tssr154956 1919 bp upstream
 SNP A/G A A A A A A A G A G
rs36393452
MGI SNP Detail		 Chr19:8993823 Ahnak within coordinates of
Tssr154956 1801 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs251504153
MGI SNP Detail		 Chr19:8994027 Ahnak within coordinates of
Tssr154956 1597 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs216089158
MGI SNP Detail		 Chr19:8994031 Ahnak within coordinates of
Tssr154956 1593 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231608528
MGI SNP Detail		 Chr19:8994032 Ahnak within coordinates of
Tssr154956 1592 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257894997
MGI SNP Detail		 Chr19:8994093 Ahnak within coordinates of
Tssr154956 1531 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220213100
MGI SNP Detail		 Chr19:8994305 Ahnak within coordinates of
Tssr154956 1319 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241119746
MGI SNP Detail		 Chr19:8994495 Ahnak within coordinates of
Tssr154951 within coordinates of
Tssr154956 1129 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261541914
MGI SNP Detail		 Chr19:8994537 Ahnak within coordinates of
Tssr154956 1087 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222685595
MGI SNP Detail		 Chr19:8994644 Ahnak within coordinates of
Tssr154956 980 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A G A
rs242624721
MGI SNP Detail		 Chr19:8994660 Ahnak within coordinates of
Tssr154956 964 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259014356
MGI SNP Detail		 Chr19:8994725 Ahnak within coordinates of
Tssr154956 899 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227899339
MGI SNP Detail		 Chr19:8995015 Ahnak within coordinates of
Tssr154956 609 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs37333615
MGI SNP Detail		 Chr19:8995058 Ahnak within coordinates of
Tssr154956 566 bp upstream
 SNP C/T C C C C C C C C C T C C T C
rs262591267
MGI SNP Detail		 Chr19:8995226 Ahnak within coordinates of
Rr362932 within coordinates of
Tssr154956 398 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227765421
MGI SNP Detail		 Chr19:8995306 Ahnak within coordinates of
Rr362932 within coordinates of
Tssr154956 318 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250233625
MGI SNP Detail		 Chr19:8995412 Ahnak within coordinates of
Tssr154956 212 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216993567
MGI SNP Detail		 Chr19:8995451 Ahnak within coordinates of
Tssr154956 173 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229604162
MGI SNP Detail		 Chr19:8996198 Ahnak within coordinates of
Tssr154956 563 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245510015
MGI SNP Detail		 Chr19:8996204 Ahnak within coordinates of
Tssr154956 569 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37207681
MGI SNP Detail		 Chr19:8996314 Ahnak within coordinates of
Tssr154956 679 bp downstream
 SNP A/G G G G G G G G G G A G G A G
rs36520166
MGI SNP Detail		 Chr19:8996417 Ahnak within coordinates of
Tssr154956 782 bp downstream
 SNP C/T T T T T T T T T T C T T C
rs262562568
MGI SNP Detail		 Chr19:8996561 Ahnak within coordinates of
Tssr154956 926 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212082707
MGI SNP Detail		 Chr19:8996592 Ahnak within coordinates of
Tssr154956 957 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237331724
MGI SNP Detail		 Chr19:8996630 Ahnak within coordinates of
Tssr154956 995 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254526703
MGI SNP Detail		 Chr19:8996640 Ahnak within coordinates of
Tssr154956 1005 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222640277
MGI SNP Detail		 Chr19:8996647 Ahnak within coordinates of
Tssr154956 1012 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242774023
MGI SNP Detail		 Chr19:8996948 Ahnak within coordinates of
Tssr154956 1313 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252636662
MGI SNP Detail		 Chr19:8996972 Ahnak within coordinates of
Tssr154956 1337 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221694656
MGI SNP Detail		 Chr19:8997076 Ahnak within coordinates of
Tssr154956 1441 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C G G C G C C G C C C C G C G C C C G C C C C C C G C C C C C C C G C C G G
rs242824765
MGI SNP Detail		 Chr19:8997387 Ahnak within coordinates of
Tssr154956 1752 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51217272
MGI SNP Detail		 Chr19:8997431 Ahnak within coordinates of
Tssr154956 1796 bp downstream
 SNP C/T C C T
rs220137990
MGI SNP Detail		 Chr19:8997444 Ahnak within coordinates of
Tssr154956 1809 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T C C T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T C C
rs45666078
MGI SNP Detail		 Chr19:8997510 Ahnak within coordinates of
Tssr154956 1875 bp downstream
 SNP A/G G G A
rs46019987
MGI SNP Detail		 Chr19:8997512 Ahnak within coordinates of
Tssr154956 1877 bp downstream
 SNP A/G A A G
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Showing SNP(s) 1 - 36 of 36
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory