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Mouse SNP Summary
Symbol
Name
ID 		Tssr157384
transcription start site region 157384
MGI:6085151

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Showing SNP(s) 1 - 41 of 41

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231878573
MGI SNP Detail		 Chr19:3371825 Tssr157384 1895 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs244888380
MGI SNP Detail		 Chr19:3371923 Tssr157384 1797 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs214017950
MGI SNP Detail		 Chr19:3371946 Tssr157384 1774 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237461669
MGI SNP Detail		 Chr19:3372188 Gm58963 within coordinates of
Tssr157384 1532 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255776801
MGI SNP Detail		 Chr19:3372388 Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1332 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219276543
MGI SNP Detail		 Chr19:3372402 Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1318 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239673318
MGI SNP Detail		 Chr19:3372436 Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1284 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G G
rs253640062
MGI SNP Detail		 Chr19:3372448 Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1272 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255141175
MGI SNP Detail		 Chr19:3372512 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1208 bp downstream
 SNP A/G G A
rs218467991
MGI SNP Detail		 Chr19:3372570 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1150 bp downstream
 SNP C/T T C
rs251180042
MGI SNP Detail		 Chr19:3372594 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1126 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221550687
MGI SNP Detail		 Chr19:3372683 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1037 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243811489
MGI SNP Detail		 Chr19:3372711 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 1009 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582206126
MGI SNP Detail		 Chr19:3372765 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 955 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264365623
MGI SNP Detail		 Chr19:3372771 Cpgi10363 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 949 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233747348
MGI SNP Detail		 Chr19:3372883 Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 837 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs239785059
MGI SNP Detail		 Chr19:3372923 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 797 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257025682
MGI SNP Detail		 Chr19:3373006 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 714 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225782765
MGI SNP Detail		 Chr19:3373038 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 682 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs243550458
MGI SNP Detail		 Chr19:3373069 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 651 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213965828
MGI SNP Detail		 Chr19:3373070 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 650 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229334432
MGI SNP Detail		 Chr19:3373168 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 552 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253085097
MGI SNP Detail		 Chr19:3373296 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 424 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C G C C C C C C C C C C C
rs219628374
MGI SNP Detail		 Chr19:3373305 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 415 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs242468626
MGI SNP Detail		 Chr19:3373322 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 398 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253769311
MGI SNP Detail		 Chr19:3373469 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 251 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215381106
MGI SNP Detail		 Chr19:3373578 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 142 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232925731
MGI SNP Detail		 Chr19:3373638 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Gm58963 within coordinates of
Tssr157384 82 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251303102
MGI SNP Detail		 Chr19:3373871 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Tssr157384 150 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220980601
MGI SNP Detail		 Chr19:3373986 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 265 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241163146
MGI SNP Detail		 Chr19:3374062 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 341 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264225213
MGI SNP Detail		 Chr19:3374138 Cpgi10364 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 417 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225627088
MGI SNP Detail		 Chr19:3374325 Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 604 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs37700495
MGI SNP Detail		 Chr19:3374756 Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1035 bp upstream
 SNP A/G G G G G G G G G G A G G G G
rs239927588
MGI SNP Detail		 Chr19:3374782 Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1061 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs108245654
MGI SNP Detail		 Chr19:3374854 Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1133 bp upstream
 SNP T T T
rs256955018
MGI SNP Detail		 Chr19:3374860 Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1139 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225892345
MGI SNP Detail		 Chr19:3374935 Cpgi10365 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1214 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241496470
MGI SNP Detail		 Chr19:3375224 Cpgi10365 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1503 bp upstream
 SNP A/G A G
rs36575428
MGI SNP Detail		 Chr19:3375395 Cpgi10365 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1674 bp upstream
 SNP C/G G G G C G G G G C G G C G G C
rs229643379
MGI SNP Detail		 Chr19:3375468 Cpgi10365 within coordinates of
Cpt1a within coordinates of
Rr394044 within coordinates of
Tssr157384 1747 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C
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Showing SNP(s) 1 - 41 of 41
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory