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Mouse SNP Summary
Symbol
Name
ID 		Tssr157469
transcription start site region 157469
MGI:6085236

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38248709
MGI SNP Detail		 Chr19:4249436 Rad9a within coordinates of
Tssr157469 1938 bp downstream
 SNP A/C C C C C C C C C C A C A A C
rs30371185
MGI SNP Detail		 Chr19:4249558 Rad9a within coordinates of
Tssr157469 1816 bp downstream
 SNP A/G A G A G G G
rs37793040
MGI SNP Detail		 Chr19:4249580 Rad9a within coordinates of
Tssr157469 1794 bp downstream
 SNP C/T C C C C C C T C C C T C C T C
rs247483999
MGI SNP Detail		 Chr19:4249751 Rad9a within coordinates of
Tssr157469 1623 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259312485
MGI SNP Detail		 Chr19:4249764 Rad9a within coordinates of
Tssr157469 1610 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs226689512
MGI SNP Detail		 Chr19:4249911 Rad9a within coordinates of
Tssr157469 1463 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584953988
MGI SNP Detail		 Chr19:4249925 Rad9a within coordinates of
Tssr157469 1449 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs245071092
MGI SNP Detail		 Chr19:4249960 Rad9a within coordinates of
Tssr157469 1414 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs212904398
MGI SNP Detail		 Chr19:4250009 Rad9a within coordinates of
Tssr157469 1365 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G A G A G G G G G G G A G G G G A G A G G G A G A G G G G
rs228197529
MGI SNP Detail		 Chr19:4250128 Rad9a within coordinates of
Tssr157469 1246 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254672745
MGI SNP Detail		 Chr19:4250182 Rad9a within coordinates of
Tssr157469 1192 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217995423
MGI SNP Detail		 Chr19:4250186 Rad9a within coordinates of
Tssr157469 1188 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs233481281
MGI SNP Detail		 Chr19:4250210 Rad9a within coordinates of
Tssr157469 1164 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251082176
MGI SNP Detail		 Chr19:4250567 Rad9a within coordinates of
Tssr157469 807 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214189331
MGI SNP Detail		 Chr19:4250618 Rad9a within coordinates of
Tssr157469 756 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231176848
MGI SNP Detail		 Chr19:4250683 Rad9a within coordinates of
Tssr157469 691 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261323944
MGI SNP Detail		 Chr19:4250684 Rad9a within coordinates of
Tssr157469 690 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219896931
MGI SNP Detail		 Chr19:4250687 Rad9a within coordinates of
Tssr157469 687 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244527768
MGI SNP Detail		 Chr19:4250792 Rad9a within coordinates of
Tssr157469 582 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261194661
MGI SNP Detail		 Chr19:4250820 Rad9a within coordinates of
Tssr157469 554 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226599613
MGI SNP Detail		 Chr19:4250828 Rad9a within coordinates of
Tssr157469 546 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241519564
MGI SNP Detail		 Chr19:4250858 Rad9a within coordinates of
Tssr157469 516 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259346094
MGI SNP Detail		 Chr19:4250973 Rad9a within coordinates of
Tssr157469 401 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226772788
MGI SNP Detail		 Chr19:4251106 Rad9a within coordinates of
Tssr157469 268 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239068622
MGI SNP Detail		 Chr19:4251141 Rad9a within coordinates of
Tssr157469 233 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264890643
MGI SNP Detail		 Chr19:4251147 Rad9a within coordinates of
Tssr157469 227 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs227699705
MGI SNP Detail		 Chr19:4251277 Cpgi10391 within coordinates of
Rad9a within coordinates of
Tssr157469 97 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260252328
MGI SNP Detail		 Chr19:4251364 Cpgi10391 within coordinates of
Rad9a within coordinates of
Tssr157469 10 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217998857
MGI SNP Detail		 Chr19:4251470 Cpgi10391 within coordinates of
Rad9a within coordinates of
Tssr157469 46 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227505723
MGI SNP Detail		 Chr19:4251526 Cpgi10391 within coordinates of
Rad9a within coordinates of
Tssr157469 102 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245158977
MGI SNP Detail		 Chr19:4251529 Cpgi10391 within coordinates of
Rad9a within coordinates of
Tssr157469 105 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214271748
MGI SNP Detail		 Chr19:4251601 Cpgi10391 within coordinates of
Rad9a within coordinates of
Rr405788 within coordinates of
Tssr157469 177 bp upstream
Tssr157471 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37901920
MGI SNP Detail		 Chr19:4251678 Cpgi10391 within coordinates of
Rr405788 within coordinates of
Tssr157469 254 bp upstream
 SNP G/T G G G G G G G G G G G G T G G
rs231256000
MGI SNP Detail		 Chr19:4251776 Cpgi10391 within coordinates of
Gm30082 within coordinates of
Rr405788 within coordinates of
Tssr157469 352 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T G T T T T
rs38914013
MGI SNP Detail		 Chr19:4251777 Cpgi10391 within coordinates of
Gm30082 within coordinates of
Rr405788 within coordinates of
Tssr157469 353 bp upstream
 SNP G/T T T T T T G T T G T T G T
rs39158410
MGI SNP Detail		 Chr19:4251938 Cpgi10391 within coordinates of
Gm30082 within coordinates of
Tssr157469 514 bp upstream
 SNP A/G G G G G G G G A G G
rs578996934
MGI SNP Detail		 Chr19:4251973 Cpgi10391 within coordinates of
Gm30082 within coordinates of
Tssr157469 549 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211873793
MGI SNP Detail		 Chr19:4252021 Gm30082 within coordinates of
Tssr157469 597 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239998758
MGI SNP Detail		 Chr19:4252090 Gm30082 within coordinates of
Tssr157469 666 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs263602258
MGI SNP Detail		 Chr19:4252103 Gm30082 within coordinates of
Tssr157469 679 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223070878
MGI SNP Detail		 Chr19:4252146 Gm30082 within coordinates of
Tssr157469 722 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241604397
MGI SNP Detail		 Chr19:4252259 Gm30082 within coordinates of
Tssr157469 835 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs253172187
MGI SNP Detail		 Chr19:4252295 Gm30082 within coordinates of
Tssr157469 871 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220530182
MGI SNP Detail		 Chr19:4252492 Gm30082 within coordinates of
Tssr157469 1068 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239103195
MGI SNP Detail		 Chr19:4252553 Gm30082 within coordinates of
Tssr157469 1129 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262042780
MGI SNP Detail		 Chr19:4252565 Gm30082 within coordinates of
Tssr157469 1141 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs228397852
MGI SNP Detail		 Chr19:4252579 Gm30082 within coordinates of
Tssr157469 1155 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248421057
MGI SNP Detail		 Chr19:4252649 Gm30082 within coordinates of
Tssr157469 1225 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265931792
MGI SNP Detail		 Chr19:4252653 Gm30082 within coordinates of
Tssr157469 1229 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227588533
MGI SNP Detail		 Chr19:4252664 Gm30082 within coordinates of
Tssr157469 1240 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245233121
MGI SNP Detail		 Chr19:4252681 Gm30082 within coordinates of
Tssr157469 1257 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256207405
MGI SNP Detail		 Chr19:4252738 Gm30082 within coordinates of
Tssr157469 1314 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582380112
MGI SNP Detail		 Chr19:4252794 Gm30082 within coordinates of
Tssr157469 1370 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225172832
MGI SNP Detail		 Chr19:4252805 Gm30082 within coordinates of
Tssr157469 1381 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C T C C C C T C C C C C C C C C C T T C C C C C C T C C C C
rs585813893
MGI SNP Detail		 Chr19:4252807 Gm30082 within coordinates of
Tssr157469 1383 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C C
rs253949141
MGI SNP Detail		 Chr19:4252861 Gm30082 within coordinates of
Tssr157469 1437 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs37528360
MGI SNP Detail		 Chr19:4252866 Gm30082 within coordinates of
Tssr157469 1442 bp upstream
 SNP A/T A A A A A A A T A A T A
rs242730202
MGI SNP Detail		 Chr19:4252914 Gm30082 within coordinates of
Tssr157469 1490 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253675019
MGI SNP Detail		 Chr19:4252973 Gm30082 within coordinates of
Tssr157469 1549 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215602055
MGI SNP Detail		 Chr19:4253072 Gm30082 within coordinates of
Tssr157469 1648 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235208253
MGI SNP Detail		 Chr19:4253113 Gm30082 within coordinates of
Tssr157469 1689 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253206178
MGI SNP Detail		 Chr19:4253248 Tssr157469 1824 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220608066
MGI SNP Detail		 Chr19:4253277 Tssr157469 1853 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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