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Mouse SNP Summary
Symbol
Name
ID 		Tssr157606
transcription start site region 157606
MGI:6085373

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239112907
MGI SNP Detail		 Chr19:5536978 Mus81 within coordinates of
Tssr157606 1991 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265669777
MGI SNP Detail		 Chr19:5536988 Mus81 within coordinates of
Tssr157606 1981 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs37446392
MGI SNP Detail		 Chr19:5537138 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1831 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs256225292
MGI SNP Detail		 Chr19:5537153 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1816 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212128950
MGI SNP Detail		 Chr19:5537229 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1740 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225067559
MGI SNP Detail		 Chr19:5537281 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1688 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A T T A T A A T A A T A T A T A A A T A A A A A A T A A A A A T A T A A A A
rs248055577
MGI SNP Detail		 Chr19:5537321 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1648 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T C C T C T T C T T C T C T T T T T C T T T T T T C T T T T T C T C T T T T
rs217597630
MGI SNP Detail		 Chr19:5537381 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1588 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234076011
MGI SNP Detail		 Chr19:5537382 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1587 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs259781525
MGI SNP Detail		 Chr19:5537398 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1571 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214511370
MGI SNP Detail		 Chr19:5537456 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1513 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237463694
MGI SNP Detail		 Chr19:5537510 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1459 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A G G A G A A G A A G A G A G A A A G A A A A A A G A A A A A G A G A A A A
rs261178763
MGI SNP Detail		 Chr19:5537528 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1441 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs30616320
MGI SNP Detail		 Chr19:5537561 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1408 bp downstream
 SNP G/T G T G T T T
rs230437474
MGI SNP Detail		 Chr19:5537582 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1387 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252337527
MGI SNP Detail		 Chr19:5537620 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1349 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222469023
MGI SNP Detail		 Chr19:5537663 Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1306 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs387064141
MGI SNP Detail		 Chr19:5537924 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 1045 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C G G C C C C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C C
rs247527839
MGI SNP Detail		 Chr19:5538109 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 860 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs263523524
MGI SNP Detail		 Chr19:5538154 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 815 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221929461
MGI SNP Detail		 Chr19:5538173 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 796 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243935807
MGI SNP Detail		 Chr19:5538186 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Tssr157606 783 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs264649153
MGI SNP Detail		 Chr19:5538395 Cpgi10453 within coordinates of
Mus81 within coordinates of
Rr363568 within coordinates of
Rr370432 within coordinates of
Tssr157605 within coordinates of
Tssr157606 574 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs224916575
MGI SNP Detail		 Chr19:5538458 Mus81 within coordinates of
Rr363568 within coordinates of
Rr370432 within coordinates of
Tssr157606 511 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs248090446
MGI SNP Detail		 Chr19:5538510 Rr363568 within coordinates of
Rr370432 within coordinates of
Tssr157606 459 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36988414
MGI SNP Detail		 Chr19:5538553 Rr363568 within coordinates of
Rr370432 within coordinates of
Tssr157606 416 bp downstream
 SNP A/T A A T A T T T T
rs261323757
MGI SNP Detail		 Chr19:5538748 Rr363568 within coordinates of
Tssr157606 221 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227570301
MGI SNP Detail		 Chr19:5538796 1700061A03Rik within coordinates of
Rr363568 within coordinates of
Tssr157606 173 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs258459225
MGI SNP Detail		 Chr19:5538831 1700061A03Rik within coordinates of
Rr363568 within coordinates of
Tssr157606 138 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs214179696
MGI SNP Detail		 Chr19:5538850 1700061A03Rik within coordinates of
Rr363568 within coordinates of
Tssr157606 119 bp downstream
 SNP C/T T T T T T T T T T T T T T T T C C T C T T C T T C T C T C T T T C T T T T T T C T T T T T C T C T T T T
rs239342118
MGI SNP Detail		 Chr19:5538866 1700061A03Rik within coordinates of
Rr363568 within coordinates of
Tssr157606 103 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs249335002
MGI SNP Detail		 Chr19:5538985 1700061A03Rik within coordinates of
Cpgi10454 within coordinates of
Rr363568 within coordinates of
Tssr157606 7 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36346630
MGI SNP Detail		 Chr19:5539020 1700061A03Rik within coordinates of
Cpgi10454 within coordinates of
Rr363568 within coordinates of
Tssr157606 42 bp upstream
 SNP A/G G G G G G G G A G G G
rs38319748
MGI SNP Detail		 Chr19:5539067 1700061A03Rik within coordinates of
Cpgi10454 within coordinates of
Rr363568 within coordinates of
Rr405805 within coordinates of
Tssr157606 89 bp upstream
 SNP C/T T T T T T T C T C T T C
rs30620077
MGI SNP Detail		 Chr19:5539225 1700061A03Rik within coordinates of
Cpgi10454 within coordinates of
Gm59148 within coordinates of
Rr363568 within coordinates of
Rr405805 within coordinates of
Tssr157606 247 bp upstream
 SNP A/G A G A G G G
rs252415681
MGI SNP Detail		 Chr19:5539314 Cpgi10454 within coordinates of
Gm59148 within coordinates of
Rr363568 within coordinates of
Rr405805 within coordinates of
Tssr157606 336 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs222371942
MGI SNP Detail		 Chr19:5539381 Cpgi10454 within coordinates of
Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr154437 within coordinates of
Tssr157606 403 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237676586
MGI SNP Detail		 Chr19:5539452 Cpgi10454 within coordinates of
Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr157606 474 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T C C T C T T C T T T T C T C T T T C T T T T T T C T T T T T T C T T T T
rs263230966
MGI SNP Detail		 Chr19:5539521 Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr157606 543 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222308535
MGI SNP Detail		 Chr19:5539674 Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr157606 696 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38348286
MGI SNP Detail		 Chr19:5539700 Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr157606 722 bp upstream
 SNP C/T C C C C C T C T C C T
rs580170307
MGI SNP Detail		 Chr19:5539844 Gm59148 within coordinates of
Rr363568 within coordinates of
Tssr157606 866 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255865133
MGI SNP Detail		 Chr19:5540049 Rr363568 within coordinates of
Tssr157606 1071 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218883187
MGI SNP Detail		 Chr19:5540082 Rr363568 within coordinates of
Tssr157606 1104 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241966322
MGI SNP Detail		 Chr19:5540089 Rr363568 within coordinates of
Tssr157606 1111 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261352359
MGI SNP Detail		 Chr19:5540090 Rr363568 within coordinates of
Tssr157606 1112 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs232196662
MGI SNP Detail		 Chr19:5540162 Rr363568 within coordinates of
Tssr157606 1184 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37851381
MGI SNP Detail		 Chr19:5540286 Cpgi10455 within coordinates of
Rr363568 within coordinates of
Rr405806 within coordinates of
Tssr157606 1308 bp upstream
 SNP C/T T T T T T T T T C T T T T
rs253214038
MGI SNP Detail		 Chr19:5540324 Cpgi10455 within coordinates of
Rr363568 within coordinates of
Rr405806 within coordinates of
Tssr157606 1346 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265123146
MGI SNP Detail		 Chr19:5540377 Cpgi10455 within coordinates of
Rr363568 within coordinates of
Rr405806 within coordinates of
Tssr157606 1399 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231031460
MGI SNP Detail		 Chr19:5540401 Cpgi10455 within coordinates of
Rr363568 within coordinates of
Rr405806 within coordinates of
Tssr157606 1423 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253168976
MGI SNP Detail		 Chr19:5540404 Cpgi10455 within coordinates of
Rr363568 within coordinates of
Rr405806 within coordinates of
Tssr157606 1426 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs38207362
MGI SNP Detail		 Chr19:5540585 Cfl1 within coordinates of
Cpgi10455 within coordinates of
Rr363568 within coordinates of
Tssr154440 within coordinates of
Tssr157606 1607 bp upstream
 SNP C/G G G G G G G G C G G
rs234791344
MGI SNP Detail		 Chr19:5540861 Cfl1 within coordinates of
Cpgi10455 within coordinates of
Rr363568 within coordinates of
Tssr157606 1883 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 54 of 54
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory