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Mouse SNP Summary
Symbol
Name
ID
Tssr157622
transcription start site region 157622
MGI:6085389

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31059656
MGI SNP Detail
Chr19:5709731 Sipa1 within coordinates of
Tssr157622 1922 bp downstream
SNP A/G G A A A G A A A A G G A G A A
rs580184239
MGI SNP Detail
Chr19:5709755 Sipa1 within coordinates of
Tssr157622 1898 bp downstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs229443503
MGI SNP Detail
Chr19:5709770 Sipa1 within coordinates of
Tssr157622 1883 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G A A G G G G A G G G G G G G G G G G G G G G G G G G G G G G
rs108095662
MGI SNP Detail
Chr19:5709822 Sipa1 within coordinates of
Tssr157622 1831 bp downstream
SNP A/C A C A
rs37430150
MGI SNP Detail
Chr19:5709837 Sipa1 within coordinates of
Tssr157622 1816 bp downstream
SNP C/T T T T T T T T T C T C T
rs30863065
MGI SNP Detail
Chr19:5709951 Sipa1 within coordinates of
Tssr157622 1702 bp downstream
SNP A/G A A G G A G
rs31139719
MGI SNP Detail
Chr19:5709963 Sipa1 within coordinates of
Tssr157622 1690 bp downstream
SNP C/T T T C T C T C
rs214929382
MGI SNP Detail
Chr19:5709982 Sipa1 within coordinates of
Tssr157622 1671 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs39179844
MGI SNP Detail
Chr19:5709984 Sipa1 within coordinates of
Tssr157622 1669 bp downstream
SNP A/T T T T A T T T T T T A A T
rs223291457
MGI SNP Detail
Chr19:5710079 Sipa1 within coordinates of
Tssr157622 1574 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242815199
MGI SNP Detail
Chr19:5710112 Sipa1 within coordinates of
Tssr157622 1541 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216581617
MGI SNP Detail
Chr19:5710135 Sipa1 within coordinates of
Tssr157622 1518 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235047737
MGI SNP Detail
Chr19:5710190 Sipa1 within coordinates of
Tssr157622 1463 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30850682
MGI SNP Detail
Chr19:5710285 Sipa1 within coordinates of
Tssr157622 1368 bp downstream
SNP A/G G G A G A
rs216640815
MGI SNP Detail
Chr19:5710296 Sipa1 within coordinates of
Tssr157622 1357 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30888293
MGI SNP Detail
Chr19:5710315 Sipa1 within coordinates of
Tssr157622 1338 bp downstream
SNP C/G G G C G C G C
rs37202952
MGI SNP Detail
Chr19:5710405 Sipa1 within coordinates of
Tssr157622 1248 bp downstream
SNP C/G C C C C C C C G C G C
rs218185650
MGI SNP Detail
Chr19:5710564 Sipa1 within coordinates of
Tssr157622 1089 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30557074
MGI SNP Detail
Chr19:5710599 Sipa1 within coordinates of
Tssr157622 1054 bp downstream
SNP A/G A G A G A G
rs37172036
MGI SNP Detail
Chr19:5710886 Cpgi10466 within coordinates of
Sipa1 within coordinates of
Tssr157622 767 bp downstream
SNP C/T C C C C C C C C T C T C
rs223730443
MGI SNP Detail
Chr19:5711344 Sipa1 within coordinates of
Tssr157622 309 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245616880
MGI SNP Detail
Chr19:5711381 Sipa1 within coordinates of
Tssr157622 272 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs265821873
MGI SNP Detail
Chr19:5711412 Sipa1 within coordinates of
Tssr157622 241 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230476020
MGI SNP Detail
Chr19:5711451 Sipa1 within coordinates of
Tssr157622 202 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247246489
MGI SNP Detail
Chr19:5711642 Sipa1 within coordinates of
Tssr157622 11 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262618005
MGI SNP Detail
Chr19:5711684 Sipa1 within coordinates of
Tssr157622 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223159856
MGI SNP Detail
Chr19:5711857 Sipa1 within coordinates of
Tssr157622 167 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242889120
MGI SNP Detail
Chr19:5711994 Sipa1 within coordinates of
Tssr157622 304 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216450233
MGI SNP Detail
Chr19:5712169 Sipa1 within coordinates of
Tssr157622 479 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229158746
MGI SNP Detail
Chr19:5712174 Sipa1 within coordinates of
Tssr157622 484 bp upstream
SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252146618
MGI SNP Detail
Chr19:5712187 Sipa1 within coordinates of
Tssr157622 497 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs216962230
MGI SNP Detail
Chr19:5712254 Sipa1 within coordinates of
Tssr157622 564 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236199560
MGI SNP Detail
Chr19:5712300 Sipa1 within coordinates of
Tssr157622 610 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262419980
MGI SNP Detail
Chr19:5712333 Sipa1 within coordinates of
Tssr157622 643 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212167012
MGI SNP Detail
Chr19:5712613 Sipa1 within coordinates of
Tssr157622 923 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230646444
MGI SNP Detail
Chr19:5712713 Sipa1 within coordinates of
Tssr157622 1023 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254638599
MGI SNP Detail
Chr19:5712734 Sipa1 within coordinates of
Tssr157622 1044 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223608681
MGI SNP Detail
Chr19:5712743 Sipa1 within coordinates of
Tssr157622 1053 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248319051
MGI SNP Detail
Chr19:5712812 Sipa1 within coordinates of
Tssr157622 1122 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs259739818
MGI SNP Detail
Chr19:5712818 Sipa1 within coordinates of
Tssr157622 1128 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222412565
MGI SNP Detail
Chr19:5712840 Sipa1 within coordinates of
Tssr157622 1150 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37755703
MGI SNP Detail
Chr19:5712843 Sipa1 within coordinates of
Tssr157622 1153 bp upstream
SNP A/T A A A T A A A A T A T A
rs254230634
MGI SNP Detail
Chr19:5712847 Sipa1 within coordinates of
Tssr157622 1157 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs217712185
MGI SNP Detail
Chr19:5712861 Sipa1 within coordinates of
Tssr157622 1171 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236347587
MGI SNP Detail
Chr19:5712895 Sipa1 within coordinates of
Tssr157622 1205 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258782542
MGI SNP Detail
Chr19:5712940 Sipa1 within coordinates of
Tssr157622 1250 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233658336
MGI SNP Detail
Chr19:5712961 Sipa1 within coordinates of
Tssr157622 1271 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs256922403
MGI SNP Detail
Chr19:5713194 Sipa1 within coordinates of
Tssr157622 1504 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38429393
MGI SNP Detail
Chr19:5713239 Sipa1 within coordinates of
Tssr157622 1549 bp upstream
SNP A/G G G G G G G G G G A G
rs36926804
MGI SNP Detail
Chr19:5713264 Sipa1 within coordinates of
Tssr157622 1574 bp upstream
SNP C/T T T T T C T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251519614
MGI SNP Detail
Chr19:5713331 Sipa1 within coordinates of
Tssr157622 1641 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212026338
MGI SNP Detail
Chr19:5713413 Sipa1 within coordinates of
Tssr157622 1723 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs230775818
MGI SNP Detail
Chr19:5713483 Cpgi10467 within coordinates of
Sipa1 within coordinates of
Tssr157622 1793 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31110137
MGI SNP Detail
Chr19:5713510 Cpgi10467 within coordinates of
Sipa1 within coordinates of
Tssr157622 1820 bp upstream
SNP A/G A G A G A G
rs217444332
MGI SNP Detail
Chr19:5713527 Cpgi10467 within coordinates of
Sipa1 within coordinates of
Tssr157622 1837 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238061682
MGI SNP Detail
Chr19:5713598 Cpgi10467 within coordinates of
Sipa1 within coordinates of
Tssr157622 1908 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263432653
MGI SNP Detail
Chr19:5713599 Cpgi10467 within coordinates of
Sipa1 within coordinates of
Tssr157622 1909 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 57 of 57

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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