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Mouse SNP Summary
Symbol
Name
ID 		Tssr157989
transcription start site region 157989
MGI:6085756

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215480303
MGI SNP Detail		 Chr19:7458679 Gm58988 within coordinates of
Rtn3 within coordinates of
Tssr157989 1885 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238978171
MGI SNP Detail		 Chr19:7458764 Gm58988 within coordinates of
Rtn3 within coordinates of
Tssr157989 1800 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs262197842
MGI SNP Detail		 Chr19:7458777 Gm58988 within coordinates of
Rtn3 within coordinates of
Tssr157989 1787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223819872
MGI SNP Detail		 Chr19:7458831 Gm58988 within coordinates of
Rtn3 within coordinates of
Tssr157989 1733 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244064735
MGI SNP Detail		 Chr19:7459015 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1549 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs256397171
MGI SNP Detail		 Chr19:7459072 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1492 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs222096235
MGI SNP Detail		 Chr19:7459108 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1456 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241762664
MGI SNP Detail		 Chr19:7459198 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1366 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs51448602
MGI SNP Detail		 Chr19:7459288 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1276 bp downstream
 SNP C/T C C T
rs36296511
MGI SNP Detail		 Chr19:7459476 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1088 bp downstream
 SNP C/T T T T C T T T T
rs246255359
MGI SNP Detail		 Chr19:7459539 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 1025 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs265053783
MGI SNP Detail		 Chr19:7459663 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 901 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230910264
MGI SNP Detail		 Chr19:7459761 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 803 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs252010591
MGI SNP Detail		 Chr19:7459826 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 738 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212572309
MGI SNP Detail		 Chr19:7459827 Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 737 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C G C C G G C C C C C C C G C C C C C C C C C C C C C C C C C C C C
rs228412150
MGI SNP Detail		 Chr19:7459883 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 681 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248540250
MGI SNP Detail		 Chr19:7459940 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 624 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs214989177
MGI SNP Detail		 Chr19:7460025 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 539 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs38084089
MGI SNP Detail		 Chr19:7460210 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 354 bp downstream
 SNP A/C C C C C C C C A A C C C C C A
rs584952364
MGI SNP Detail		 Chr19:7460229 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 335 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250989785
MGI SNP Detail		 Chr19:7460284 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 280 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs586790917
MGI SNP Detail		 Chr19:7460293 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 271 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs215622572
MGI SNP Detail		 Chr19:7460417 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543685 within coordinates of
Rtn3 within coordinates of
Tssr157989 147 bp downstream
 SNP A/G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235117109
MGI SNP Detail		 Chr19:7460571 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248969679
MGI SNP Detail		 Chr19:7460576 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 1 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30857088
MGI SNP Detail		 Chr19:7460599 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 24 bp upstream
 SNP A/T A A A A A A A T A T A A T T
rs37864423
MGI SNP Detail		 Chr19:7460601 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 26 bp upstream
 SNP C/T C C C C C T T C C C
rs579678679
MGI SNP Detail		 Chr19:7460639 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 64 bp upstream
Tssr157991 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs583410813
MGI SNP Detail		 Chr19:7460640 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Rtn3 within coordinates of
Tssr157989 65 bp upstream
Tssr157991 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A
rs587125876
MGI SNP Detail		 Chr19:7460661 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 86 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G
rs235283009
MGI SNP Detail		 Chr19:7460723 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 148 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251353214
MGI SNP Detail		 Chr19:7460727 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 152 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221559250
MGI SNP Detail		 Chr19:7460791 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 216 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs38694576
MGI SNP Detail		 Chr19:7460831 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 256 bp upstream
 SNP A/G A A A A A A A A A A A A G A
rs262329245
MGI SNP Detail		 Chr19:7460833 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 258 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs223082810
MGI SNP Detail		 Chr19:7460842 Cpgi10559 within coordinates of
Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 267 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241198519
MGI SNP Detail		 Chr19:7460865 Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 290 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256771382
MGI SNP Detail		 Chr19:7460876 Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 301 bp upstream
 SNP G/T G G G G G G G G G T G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G T G
rs228352358
MGI SNP Detail		 Chr19:7460890 Gm58988 within coordinates of
Rr543686 within coordinates of
Tssr157989 315 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581340807
MGI SNP Detail		 Chr19:7461263 Gm58988 within coordinates of
Tssr157989 688 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248477791
MGI SNP Detail		 Chr19:7461367 Gm58988 within coordinates of
Tssr157989 792 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36916510
MGI SNP Detail		 Chr19:7461432 Gm58988 within coordinates of
Tssr157989 857 bp upstream
 SNP A/G G G G G G G G A G G G G
rs258845553
MGI SNP Detail		 Chr19:7461667 Gm58988 within coordinates of
Tssr157989 1092 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585016291
MGI SNP Detail		 Chr19:7461888 Gm58988 within coordinates of
Tssr157989 1313 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs587405778
MGI SNP Detail		 Chr19:7461889 Gm58988 within coordinates of
Tssr157989 1314 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37723497
MGI SNP Detail		 Chr19:7461940 Gm58988 within coordinates of
Tssr157989 1365 bp upstream
 SNP A/G A A A A A A A G A A A
rs31215437
MGI SNP Detail		 Chr19:7461994 Gm58988 within coordinates of
Tssr157989 1419 bp upstream
 SNP A/G A A A A G
rs255608779
MGI SNP Detail		 Chr19:7461997 Gm58988 within coordinates of
Tssr157989 1422 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581735740
MGI SNP Detail		 Chr19:7462082 Gm58988 within coordinates of
Tssr157989 1507 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30357109
MGI SNP Detail		 Chr19:7462089 Gm58988 within coordinates of
Tssr157989 1514 bp upstream
 SNP C/T C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583904906
MGI SNP Detail		 Chr19:7462232 Gm58988 within coordinates of
Tssr157989 1657 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578444144
MGI SNP Detail		 Chr19:7462237 Gm58988 within coordinates of
Tssr157989 1662 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs581971884
MGI SNP Detail		 Chr19:7462238 Gm58988 within coordinates of
Tssr157989 1663 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs584610107
MGI SNP Detail		 Chr19:7462256 Gm58988 within coordinates of
Tssr157989 1681 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215110062
MGI SNP Detail		 Chr19:7462265 Gm58988 within coordinates of
Tssr157989 1690 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs236607709
MGI SNP Detail		 Chr19:7462457 Gm58988 within coordinates of
Tssr157989 1882 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243398095
MGI SNP Detail		 Chr19:7462462 Gm58988 within coordinates of
Tssr157989 1887 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs578788285
MGI SNP Detail		 Chr19:7462517 Gm58988 within coordinates of
Tssr157989 1942 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs217009468
MGI SNP Detail		 Chr19:7462572 Gm58988 within coordinates of
Tssr157989 1997 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 59 of 59
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory