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Mouse SNP Summary
Symbol
Name
ID 		Tssr159621
transcription start site region 159621
MGI:6087388

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254639973
MGI SNP Detail		 Chr19:46304425 Psd within coordinates of
Tssr159621 1971 bp downstream
 SNP A/C/T A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A A T A A A A
rs216548121
MGI SNP Detail		 Chr19:46304448 Psd within coordinates of
Tssr159621 1948 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230729936
MGI SNP Detail		 Chr19:46304463 Psd within coordinates of
Tssr159621 1933 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs242306033
MGI SNP Detail		 Chr19:46304571 Psd within coordinates of
Tssr159621 1825 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214344042
MGI SNP Detail		 Chr19:46304736 Psd within coordinates of
Tssr159621 1660 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236287865
MGI SNP Detail		 Chr19:46304766 Psd within coordinates of
Tssr159621 1630 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263371817
MGI SNP Detail		 Chr19:46304876 Psd within coordinates of
Tssr159621 1520 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs224416794
MGI SNP Detail		 Chr19:46304987 Psd within coordinates of
Tssr159621 1409 bp downstream
 SNP G/T T T T G T T G G T T T T T T T T T T T T T G T G G T T T T G T T T T T T T T T T T T T T T T T T T T T G G
rs579244208
MGI SNP Detail		 Chr19:46305230 Psd within coordinates of
Tssr159621 1166 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582965501
MGI SNP Detail		 Chr19:46305231 Psd within coordinates of
Tssr159621 1165 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586154944
MGI SNP Detail		 Chr19:46305232 Psd within coordinates of
Tssr159621 1164 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243254640
MGI SNP Detail		 Chr19:46305251 Psd within coordinates of
Tssr159621 1145 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46209295
MGI SNP Detail		 Chr19:46305524 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 872 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C
rs30890690
MGI SNP Detail		 Chr19:46305608 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 788 bp downstream
 SNP C/T C T T C
rs237485971
MGI SNP Detail		 Chr19:46305647 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 749 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50769569
MGI SNP Detail		 Chr19:46305814 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 582 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs30523320
MGI SNP Detail		 Chr19:46305862 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 534 bp downstream
 SNP C/T C T C C C C
rs30454458
MGI SNP Detail		 Chr19:46305900 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 496 bp downstream
 SNP A/G A G A G
rs265628458
MGI SNP Detail		 Chr19:46305909 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 487 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231482674
MGI SNP Detail		 Chr19:46305919 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 477 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259876440
MGI SNP Detail		 Chr19:46306044 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 352 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258689762
MGI SNP Detail		 Chr19:46306123 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 273 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224239351
MGI SNP Detail		 Chr19:46306163 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 233 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T C C C C C C C C C C C C C C
rs242156410
MGI SNP Detail		 Chr19:46306298 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 98 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214381883
MGI SNP Detail		 Chr19:46306455 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 56 bp upstream
Tssr159623 within coordinates of
 SNP A/T A A A A A A A A A A A T A A T A A T A A A A A A T A A A A T A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238038722
MGI SNP Detail		 Chr19:46306493 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 94 bp upstream
Tssr159623 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs224505026
MGI SNP Detail		 Chr19:46306693 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 294 bp upstream
 SNP T T T
rs216238640
MGI SNP Detail		 Chr19:46306701 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 302 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240525869
MGI SNP Detail		 Chr19:46306703 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 304 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254624170
MGI SNP Detail		 Chr19:46306862 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 463 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218989677
MGI SNP Detail		 Chr19:46306973 Cpgi10993 within coordinates of
Psd within coordinates of
Tssr159621 574 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C
rs254949640
MGI SNP Detail		 Chr19:46307085 Psd within coordinates of
Tssr159621 686 bp upstream
 SNP C C C
rs252271457
MGI SNP Detail		 Chr19:46307114 Psd within coordinates of
Tssr159621 715 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46880121
MGI SNP Detail		 Chr19:46307152 Psd within coordinates of
Tssr159621 753 bp upstream
 SNP C C C C C
rs249600247
MGI SNP Detail		 Chr19:46307214 Psd within coordinates of
Tssr159621 815 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs259126915
MGI SNP Detail		 Chr19:46307390 Psd within coordinates of
Tssr159621 991 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223737150
MGI SNP Detail		 Chr19:46307418 Psd within coordinates of
Tssr159621 1019 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241224319
MGI SNP Detail		 Chr19:46307640 Psd within coordinates of
Tssr159621 1241 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs258732709
MGI SNP Detail		 Chr19:46307654 Psd within coordinates of
Tssr159621 1255 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs232736643
MGI SNP Detail		 Chr19:46307672 Psd within coordinates of
Tssr159621 1273 bp upstream
 SNP C C C
rs235788178
MGI SNP Detail		 Chr19:46307744 Psd within coordinates of
Tssr159621 1345 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256159666
MGI SNP Detail		 Chr19:46307869 Psd within coordinates of
Tssr159621 1470 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229958691
MGI SNP Detail		 Chr19:46307881 Psd within coordinates of
Tssr159621 1482 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31242500
MGI SNP Detail		 Chr19:46308021 Psd within coordinates of
Tssr159621 1622 bp upstream
 SNP A/G G A G A
rs215673235
MGI SNP Detail		 Chr19:46308047 Psd within coordinates of
Tssr159621 1648 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235062492
MGI SNP Detail		 Chr19:46308080 Psd within coordinates of
Tssr159621 1681 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs248047707
MGI SNP Detail		 Chr19:46308190 Psd within coordinates of
Tssr159621 1791 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213053533
MGI SNP Detail		 Chr19:46308219 Psd within coordinates of
Tssr159621 1820 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs230034222
MGI SNP Detail		 Chr19:46308387 Psd within coordinates of
Tssr159621 1988 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252352017
MGI SNP Detail		 Chr19:46308390 Psd within coordinates of
Tssr159621 1991 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214507697
MGI SNP Detail		 Chr19:46308391 Psd within coordinates of
Tssr159621 1992 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239089879
MGI SNP Detail		 Chr19:46308394 Psd within coordinates of
Tssr159621 1995 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 52 of 52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory