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Mouse SNP Summary
Symbol
Name
ID 		Tssr160377
transcription start site region 160377
MGI:6088144

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Showing SNP(s) 1 - 41 of 41

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254054022
MGI SNP Detail		 ChrX:7436932 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Tssr160377 1980 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs217400949
MGI SNP Detail		 ChrX:7437021 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Tssr160377 1891 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33354768
MGI SNP Detail		 ChrX:7437059 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Rr689613 within coordinates of
Tssr160377 1853 bp upstream
 SNP A/G G G G G G G G A
rs233036653
MGI SNP Detail		 ChrX:7437152 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Rr689613 within coordinates of
Tssr160377 1760 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245144863
MGI SNP Detail		 ChrX:7437283 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Rr689613 within coordinates of
Tssr160377 1629 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214317434
MGI SNP Detail		 ChrX:7437418 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Rr689613 within coordinates of
Tssr160377 1494 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231392170
MGI SNP Detail		 ChrX:7437428 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Rr689613 within coordinates of
Tssr160371 within coordinates of
Tssr160377 1484 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs261528532
MGI SNP Detail		 ChrX:7437467 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Tssr160377 1445 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219843728
MGI SNP Detail		 ChrX:7437472 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr122 within coordinates of
Tssr160377 1440 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581856326
MGI SNP Detail		 ChrX:7437582 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1330 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242683008
MGI SNP Detail		 ChrX:7437637 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1275 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260009645
MGI SNP Detail		 ChrX:7437757 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1155 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221561240
MGI SNP Detail		 ChrX:7437770 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1142 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240333516
MGI SNP Detail		 ChrX:7437798 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1114 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258594460
MGI SNP Detail		 ChrX:7437940 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 972 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs219806979
MGI SNP Detail		 ChrX:7437997 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 915 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233240698
MGI SNP Detail		 ChrX:7438020 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 892 bp upstream
 SNP C/T T C
rs264755056
MGI SNP Detail		 ChrX:7438027 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 885 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233916748
MGI SNP Detail		 ChrX:7438040 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 872 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259232556
MGI SNP Detail		 ChrX:7438059 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 853 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258222599
MGI SNP Detail		 ChrX:7438147 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 765 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226982438
MGI SNP Detail		 ChrX:7438185 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 727 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244750955
MGI SNP Detail		 ChrX:7438189 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 723 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214227558
MGI SNP Detail		 ChrX:7438285 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 627 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs231318048
MGI SNP Detail		 ChrX:7438359 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 553 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249832059
MGI SNP Detail		 ChrX:7438362 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 550 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240315545
MGI SNP Detail		 ChrX:7438662 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 250 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs263618401
MGI SNP Detail		 ChrX:7438710 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 202 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T
rs215638210
MGI SNP Detail		 ChrX:7438873 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 39 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233542590
MGI SNP Detail		 ChrX:7438883 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160375 within coordinates of
Tssr160377 29 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251799462
MGI SNP Detail		 ChrX:7438964 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 36 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219772485
MGI SNP Detail		 ChrX:7439053 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 125 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs245377675
MGI SNP Detail		 ChrX:7439237 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 309 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255791890
MGI SNP Detail		 ChrX:7439239 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 311 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227606318
MGI SNP Detail		 ChrX:7439258 Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 330 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs247997650
MGI SNP Detail		 ChrX:7439657 Cpgi22568 within coordinates of
Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr689614 within coordinates of
Tssr160377 729 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387374627
MGI SNP Detail		 ChrX:7439691 Cpgi22568 within coordinates of
Gm36995 within coordinates of
Ppp1r3f within coordinates of
Rr689614 within coordinates of
Tssr160377 763 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258182033
MGI SNP Detail		 ChrX:7440103 Cpgi22568 within coordinates of
Flicr within coordinates of
Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1175 bp downstream
 SNP G/T G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T T G G G G G G G G G
rs226897154
MGI SNP Detail		 ChrX:7440155 Cpgi22568 within coordinates of
Flicr within coordinates of
Gm36995 within coordinates of
Ppp1r3f within coordinates of
Tssr160377 1227 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs255610965
MGI SNP Detail		 ChrX:7440633 Cpgi22568 within coordinates of
Flicr within coordinates of
Gm36995 within coordinates of
Rr406079 within coordinates of
Rr689615 within coordinates of
Tssr160377 1705 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs229693473
MGI SNP Detail		 ChrX:7440837 Cpgi22568 within coordinates of
Flicr within coordinates of
Gm36995 within coordinates of
Rr689615 within coordinates of
Tssr160377 1909 bp downstream
 SNP G/T G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T T G G G G G G G G G G
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Showing SNP(s) 1 - 41 of 41
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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