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Mouse SNP Summary
Symbol
Name
ID 		Tssr160433
transcription start site region 160433
MGI:6088200

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Showing SNP(s) 1 - 49 of 49

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256927766
MGI SNP Detail		 ChrX:7629383 Tfe3 within coordinates of
Tssr160433 1166 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214526665
MGI SNP Detail		 ChrX:7629468 Tfe3 within coordinates of
Tssr160433 1081 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238367146
MGI SNP Detail		 ChrX:7629474 Tfe3 within coordinates of
Tssr160433 1075 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250729515
MGI SNP Detail		 ChrX:7629550 Tfe3 within coordinates of
Tssr160433 999 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs218480711
MGI SNP Detail		 ChrX:7629733 Tfe3 within coordinates of
Tssr160433 816 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236817859
MGI SNP Detail		 ChrX:7629737 Tfe3 within coordinates of
Tssr160433 812 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264314690
MGI SNP Detail		 ChrX:7629743 Tfe3 within coordinates of
Tssr160433 806 bp upstream
 SNP C/T T C
rs225348387
MGI SNP Detail		 ChrX:7629824 Tfe3 within coordinates of
Tssr160433 725 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs245373962
MGI SNP Detail		 ChrX:7629979 Tfe3 within coordinates of
Tssr160433 570 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs265326724
MGI SNP Detail		 ChrX:7630006 Tfe3 within coordinates of
Tssr160433 543 bp upstream
Tssr162815 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs33365513
MGI SNP Detail		 ChrX:7630009 Tfe3 within coordinates of
Tssr160433 540 bp upstream
Tssr162815 within coordinates of
 SNP C/G C C C C C C G C C G C C G C
rs237402113
MGI SNP Detail		 ChrX:7630069 Tfe3 within coordinates of
Tssr160433 480 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254552980
MGI SNP Detail		 ChrX:7630312 Tfe3 within coordinates of
Tssr160433 237 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs581460441
MGI SNP Detail		 ChrX:7630370 Tfe3 within coordinates of
Tssr160433 179 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs223466122
MGI SNP Detail		 ChrX:7630426 Tfe3 within coordinates of
Tssr160433 123 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs247447900
MGI SNP Detail		 ChrX:7630547 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 2 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs264014888
MGI SNP Detail		 ChrX:7630688 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 128 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232674488
MGI SNP Detail		 ChrX:7630710 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 150 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251959727
MGI SNP Detail		 ChrX:7630853 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 293 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214826870
MGI SNP Detail		 ChrX:7630898 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 338 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T T
rs225579060
MGI SNP Detail		 ChrX:7630923 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 363 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244540376
MGI SNP Detail		 ChrX:7630988 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 428 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212375569
MGI SNP Detail		 ChrX:7631267 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 707 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236753742
MGI SNP Detail		 ChrX:7631362 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 802 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs31077516
MGI SNP Detail		 ChrX:7631470 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 910 bp downstream
 SNP A/G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254784598
MGI SNP Detail		 ChrX:7631501 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 941 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C A C C C C C C A C C C C C C C C C C
rs221123718
MGI SNP Detail		 ChrX:7631545 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 985 bp downstream
 SNP C/T C T
rs217352640
MGI SNP Detail		 ChrX:7631606 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1046 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240003393
MGI SNP Detail		 ChrX:7631615 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1055 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257949281
MGI SNP Detail		 ChrX:7631717 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1157 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs222324800
MGI SNP Detail		 ChrX:7631785 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1225 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236901095
MGI SNP Detail		 ChrX:7631869 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1309 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248775708
MGI SNP Detail		 ChrX:7631887 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1327 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217824291
MGI SNP Detail		 ChrX:7631899 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1339 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs241463574
MGI SNP Detail		 ChrX:7631931 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1371 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs265904984
MGI SNP Detail		 ChrX:7632048 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1488 bp downstream
Tssr162816 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232353829
MGI SNP Detail		 ChrX:7632068 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1508 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs33362434
MGI SNP Detail		 ChrX:7632069 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1509 bp downstream
 SNP A/G G G G G G G A G G G G G G G
rs262639460
MGI SNP Detail		 ChrX:7632107 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1547 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs225518414
MGI SNP Detail		 ChrX:7632136 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1576 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244097014
MGI SNP Detail		 ChrX:7632157 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1597 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G
rs211856236
MGI SNP Detail		 ChrX:7632199 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1639 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs229449602
MGI SNP Detail		 ChrX:7632375 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1815 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33362437
MGI SNP Detail		 ChrX:7632382 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1822 bp downstream
 SNP A/G A A A A A A G A A A A A A A
rs217554882
MGI SNP Detail		 ChrX:7632409 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1849 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33362440
MGI SNP Detail		 ChrX:7632426 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1866 bp downstream
 SNP C/T T T T T T T C T T C T T C
rs262478546
MGI SNP Detail		 ChrX:7632436 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1876 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33362443
MGI SNP Detail		 ChrX:7632450 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 1890 bp downstream
 SNP C/T C C C C C C T C T
rs230802535
MGI SNP Detail		 ChrX:7632560 Rr394688 within coordinates of
Tfe3 within coordinates of
Tssr160433 2000 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 49 of 49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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