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Mouse SNP Summary
Symbol
Name
ID 		Tssr160561
transcription start site region 160561
MGI:6088328

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262006189
MGI SNP Detail		 ChrX:12452038 Tssr160561 1992 bp upstream
 SNP C/T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T
rs221292295
MGI SNP Detail		 ChrX:12452042 Tssr160561 1988 bp upstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C T C C T T
rs237088649
MGI SNP Detail		 ChrX:12452045 Tssr160561 1985 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256176192
MGI SNP Detail		 ChrX:12452047 Tssr160561 1983 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223653407
MGI SNP Detail		 ChrX:12452163 Tssr160561 1867 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs242068057
MGI SNP Detail		 ChrX:12452180 Tssr160561 1850 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A
rs263628706
MGI SNP Detail		 ChrX:12452184 Tssr160561 1846 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs232227953
MGI SNP Detail		 ChrX:12452327 Tssr160561 1703 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T A T T T
rs244565977
MGI SNP Detail		 ChrX:12452332 Tssr160561 1698 bp upstream
 SNP A/T A A A A A A A A A T A A A A A A A A A T A A A A A T A A A A A A A A A T A A A A A A A A A A T A A T T
rs265175172
MGI SNP Detail		 ChrX:12452353 Tssr160561 1677 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs33622112
MGI SNP Detail		 ChrX:12452391 Tssr160561 1639 bp upstream
 SNP A/C A A A A A A C A A A A A A A A
rs242601590
MGI SNP Detail		 ChrX:12452684 Tssr160561 1346 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586307273
MGI SNP Detail		 ChrX:12452726 Tssr160561 1304 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217161967
MGI SNP Detail		 ChrX:12452764 Tssr160561 1266 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33622935
MGI SNP Detail		 ChrX:12452838 Tssr160561 1192 bp upstream
 SNP A/G G G G G G G A G A G A G A A
rs257973141
MGI SNP Detail		 ChrX:12452904 Tssr160561 1126 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs33622937
MGI SNP Detail		 ChrX:12453047 Tssr160561 983 bp upstream
 SNP C/T T T T T T T C T C T C T T C C
rs238722787
MGI SNP Detail		 ChrX:12453050 Tssr160561 980 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33622940
MGI SNP Detail		 ChrX:12453068 Tssr160561 962 bp upstream
 SNP A/C C C C C C A C C C C C C
rs213283710
MGI SNP Detail		 ChrX:12453283 Tssr160561 747 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229793889
MGI SNP Detail		 ChrX:12453555 Rr690145 within coordinates of
Tssr160561 475 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs33622943
MGI SNP Detail		 ChrX:12453573 Rr690145 within coordinates of
Tssr160561 457 bp upstream
 SNP C/T C C C C C C T C C C C C C
rs223613034
MGI SNP Detail		 ChrX:12453839 Cpgi22626 within coordinates of
Rr406087 within coordinates of
Rr690145 within coordinates of
Tssr160561 191 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242129541
MGI SNP Detail		 ChrX:12453849 Cpgi22626 within coordinates of
Rr406087 within coordinates of
Rr690145 within coordinates of
Tssr160561 181 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263470772
MGI SNP Detail		 ChrX:12453907 Cpgi22626 within coordinates of
Rr406087 within coordinates of
Rr690145 within coordinates of
Tssr160561 123 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33623696
MGI SNP Detail		 ChrX:12453920 Cpgi22626 within coordinates of
Rr406087 within coordinates of
Rr690145 within coordinates of
Tssr160561 110 bp upstream
 SNP C/T C C C C C C T C T C T C C T T
rs247003690
MGI SNP Detail		 ChrX:12453963 Cpgi22626 within coordinates of
Rr406087 within coordinates of
Rr690145 within coordinates of
Tssr160561 67 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs262552090
MGI SNP Detail		 ChrX:12454148 Atp6ap2 within coordinates of
Cpgi22626 within coordinates of
Rr690146 within coordinates of
Tssr160561 63 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs224863530
MGI SNP Detail		 ChrX:12454202 Atp6ap2 within coordinates of
Cpgi22626 within coordinates of
Rr690146 within coordinates of
Rr690147 within coordinates of
Tssr160561 117 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs236138061
MGI SNP Detail		 ChrX:12454405 Atp6ap2 within coordinates of
Rr690146 within coordinates of
Tssr160561 320 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C
rs260105147
MGI SNP Detail		 ChrX:12454408 Atp6ap2 within coordinates of
Rr690146 within coordinates of
Tssr160561 323 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs228755412
MGI SNP Detail		 ChrX:12454451 Atp6ap2 within coordinates of
Rr690146 within coordinates of
Tssr160561 366 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs33623699
MGI SNP Detail		 ChrX:12454803 Atp6ap2 within coordinates of
Tssr160561 718 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs215921502
MGI SNP Detail		 ChrX:12454807 Atp6ap2 within coordinates of
Tssr160561 722 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33623702
MGI SNP Detail		 ChrX:12454942 Atp6ap2 within coordinates of
Tssr160561 857 bp downstream
 SNP G/T G G G G G G G G G G T G G T G
rs254874713
MGI SNP Detail		 ChrX:12454977 Atp6ap2 within coordinates of
Tssr160561 892 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581856772
MGI SNP Detail		 ChrX:12455027 Atp6ap2 within coordinates of
Tssr160561 942 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585800930
MGI SNP Detail		 ChrX:12455039 Atp6ap2 within coordinates of
Tssr160561 954 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212842903
MGI SNP Detail		 ChrX:12455107 Atp6ap2 within coordinates of
Tssr160561 1022 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33624465
MGI SNP Detail		 ChrX:12455121 Atp6ap2 within coordinates of
Tssr160561 1036 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
rs33624468
MGI SNP Detail		 ChrX:12455144 Atp6ap2 within coordinates of
Tssr160561 1059 bp downstream
 SNP G/T T T T T T T T T T T G T T G T
rs579743667
MGI SNP Detail		 ChrX:12455267 Atp6ap2 within coordinates of
Tssr160561 1182 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216542126
MGI SNP Detail		 ChrX:12455319 Atp6ap2 within coordinates of
Tssr160561 1234 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33624471
MGI SNP Detail		 ChrX:12455417 Atp6ap2 within coordinates of
Tssr160561 1332 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs240882362
MGI SNP Detail		 ChrX:12455427 Atp6ap2 within coordinates of
Tssr160561 1342 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs259618734
MGI SNP Detail		 ChrX:12455437 Atp6ap2 within coordinates of
Tssr160561 1352 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs33625174
MGI SNP Detail		 ChrX:12455445 Atp6ap2 within coordinates of
Tssr160561 1360 bp downstream
 SNP C/G C C C C C C C C C G C C G C
rs237067596
MGI SNP Detail		 ChrX:12455477 Atp6ap2 within coordinates of
Tssr160561 1392 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs33625176
MGI SNP Detail		 ChrX:12455526 Atp6ap2 within coordinates of
Tssr160561 1441 bp downstream
 SNP C/G C C C C C C G C G C G C C G G
rs218734936
MGI SNP Detail		 ChrX:12455627 Atp6ap2 within coordinates of
Tssr160561 1542 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236205803
MGI SNP Detail		 ChrX:12455651 Atp6ap2 within coordinates of
Tssr160561 1566 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260269403
MGI SNP Detail		 ChrX:12455680 Atp6ap2 within coordinates of
Tssr160561 1595 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222161231
MGI SNP Detail		 ChrX:12455688 Atp6ap2 within coordinates of
Tssr160561 1603 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249523770
MGI SNP Detail		 ChrX:12455828 Atp6ap2 within coordinates of
Tssr160561 1743 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263056325
MGI SNP Detail		 ChrX:12455852 Atp6ap2 within coordinates of
Tssr160561 1767 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107753501
MGI SNP Detail		 ChrX:12456020 Atp6ap2 within coordinates of
Tssr160561 1935 bp downstream
 SNP A/G A G
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Showing SNP(s) 1 - 56 of 56
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory