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Mouse SNP Summary
Symbol
Name
ID
Tssr160749
transcription start site region 160749
MGI:6088516

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258824110
MGI SNP Detail
ChrX:36054623 Tssr160749 1993 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs217132611
MGI SNP Detail
ChrX:36054631 Tssr160749 1985 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227313982
MGI SNP Detail
ChrX:36054654 Tssr160749 1962 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T A T T T T
rs247182437
MGI SNP Detail
ChrX:36054670 Tssr160749 1946 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs238939659
MGI SNP Detail
ChrX:36054875 Tssr160749 1741 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs255360712
MGI SNP Detail
ChrX:36054956 Tssr160749 1660 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A T A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A
rs212491964
MGI SNP Detail
ChrX:36055111 Tssr160749 1505 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs235562429
MGI SNP Detail
ChrX:36055114 Tssr160749 1502 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252686824
MGI SNP Detail
ChrX:36055146 Tssr160749 1470 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs222720222
MGI SNP Detail
ChrX:36055157 Tssr160749 1459 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239302136
MGI SNP Detail
ChrX:36055202 Tssr160749 1414 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C T C
rs252318766
MGI SNP Detail
ChrX:36055224 Tssr160749 1392 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs222910703
MGI SNP Detail
ChrX:36055225 Tssr160749 1391 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T T T T T
rs247221222
MGI SNP Detail
ChrX:36055310 Tssr160749 1306 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs261662903
MGI SNP Detail
ChrX:36055333 Tssr160749 1283 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A G
rs228978939
MGI SNP Detail
ChrX:36055386 Tssr160749 1230 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs241758776
MGI SNP Detail
ChrX:36055544 Tssr160749 1072 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs261093168
MGI SNP Detail
ChrX:36055559 Tssr160749 1057 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs227080850
MGI SNP Detail
ChrX:36055572 Tssr160749 1044 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246944314
MGI SNP Detail
ChrX:36055650 Tssr160749 966 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs213651785
MGI SNP Detail
ChrX:36055663 Tssr160749 953 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C
rs230850382
MGI SNP Detail
ChrX:36055668 Tssr160749 948 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs237408539
MGI SNP Detail
ChrX:36055730 Tssr160749 886 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C G C C C C C C C G C C C
rs252781153
MGI SNP Detail
ChrX:36055739 Tssr160749 877 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C T C C C
rs217431576
MGI SNP Detail
ChrX:36055764 Tssr160749 852 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C G C C C C C C C G C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232951348
MGI SNP Detail
ChrX:36055783 Tssr160749 833 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251988504
MGI SNP Detail
ChrX:36055816 Tssr160749 800 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C A C C C C
rs222647432
MGI SNP Detail
ChrX:36055839 Tssr160749 777 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C C
rs237359528
MGI SNP Detail
ChrX:36055878 Tssr160749 738 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C A C C C C
rs584136152
MGI SNP Detail
ChrX:36055905 Tssr160749 711 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587524409
MGI SNP Detail
ChrX:36055914 Tssr160749 702 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A
rs581357596
MGI SNP Detail
ChrX:36055948 Tssr160749 668 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8245872
MGI SNP Detail
ChrX:36055961 Tssr160749 655 bp upstream
SNP C/G G G G G G G G G G G C
rs8245873
MGI SNP Detail
ChrX:36055987 Tssr160749 629 bp upstream
SNP A/G G G G G G G G G G A
rs8245875
MGI SNP Detail
ChrX:36056020 Tssr160749 596 bp upstream
SNP A/C A A A A A A A C
rs584842684
MGI SNP Detail
ChrX:36056061 Tssr160749 555 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs586708830
MGI SNP Detail
ChrX:36056064 Tssr160749 552 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs242258173
MGI SNP Detail
ChrX:36056086 Tssr160749 530 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs581050088
MGI SNP Detail
ChrX:36056092 Tssr160749 524 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs584546185
MGI SNP Detail
ChrX:36056094 Tssr160749 522 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs261122497
MGI SNP Detail
ChrX:36056309 Tssr160749 307 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs220799005
MGI SNP Detail
ChrX:36056316 Tssr160749 300 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G
rs241008383
MGI SNP Detail
ChrX:36056375 Tssr160749 241 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs262187466
MGI SNP Detail
ChrX:36056395 Tssr160749 221 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231153964
MGI SNP Detail
ChrX:36056471 Tssr160749 145 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T
rs249087271
MGI SNP Detail
ChrX:36056473 Tssr160749 143 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs264854137
MGI SNP Detail
ChrX:36056542 Tssr160749 74 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs228296053
MGI SNP Detail
ChrX:36056549 Tssr160749 67 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247299542
MGI SNP Detail
ChrX:36056662 Tssr160749 40 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C C C C T C C C
rs217455766
MGI SNP Detail
ChrX:36056678 Tssr160749 56 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232985241
MGI SNP Detail
ChrX:36056679 Tssr160749 57 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A
rs578478227
MGI SNP Detail
ChrX:36056819 Tssr160749 197 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G A G G G
rs246065712
MGI SNP Detail
ChrX:36056857 Tssr160749 235 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs213803417
MGI SNP Detail
ChrX:36056919 Tssr160749 297 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255895819
MGI SNP Detail
ChrX:36057139 Tssr160749 517 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs221535492
MGI SNP Detail
ChrX:36057140 Tssr160749 518 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235856404
MGI SNP Detail
ChrX:36057228 Tssr160749 606 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs255497553
MGI SNP Detail
ChrX:36057236 Tssr160749 614 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs220834273
MGI SNP Detail
ChrX:36057244 Tssr160749 622 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241041612
MGI SNP Detail
ChrX:36057272 Tssr160749 650 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T C T
rs264986233
MGI SNP Detail
ChrX:36057275 Tssr160749 653 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A G A
rs223074196
MGI SNP Detail
ChrX:36057277 Tssr160749 655 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs243602447
MGI SNP Detail
ChrX:36057325 Tssr160749 703 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs261948610
MGI SNP Detail
ChrX:36057352 Tssr160749 730 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228346775
MGI SNP Detail
ChrX:36057418 Tssr160749 796 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs247332523
MGI SNP Detail
ChrX:36057466 Tssr160749 844 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs257047230
MGI SNP Detail
ChrX:36057470 Tssr160749 848 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T
rs226998379
MGI SNP Detail
ChrX:36057487 Tssr160749 865 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs253285581
MGI SNP Detail
ChrX:36057492 Tssr160749 870 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs214396542
MGI SNP Detail
ChrX:36057522 Tssr160749 900 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs237110653
MGI SNP Detail
ChrX:36057655 Tssr160749 1033 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs252698948
MGI SNP Detail
ChrX:36057691 Tssr160749 1069 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs213255017
MGI SNP Detail
ChrX:36057728 Tssr160749 1106 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs235909933
MGI SNP Detail
ChrX:36057769 Tssr160749 1147 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs255533484
MGI SNP Detail
ChrX:36057790 Tssr160749 1168 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215401084
MGI SNP Detail
ChrX:36057910 Tssr160749 1288 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs235069882
MGI SNP Detail
ChrX:36058167 Tssr160749 1545 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C
rs8238374
MGI SNP Detail
ChrX:36058519 Tssr160749 1897 bp downstream
SNP A/G G G G G G G G G G A
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Showing SNP(s) 1 - 78 of 78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory