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Mouse SNP Summary
Symbol
Name
ID
Tssr160792
transcription start site region 160792
MGI:6088559

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237583991
MGI SNP Detail
ChrX:37688096 Tssr160792 1990 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C T C C C T C C C C C C T C C C C C C C T C C C
rs253332634
MGI SNP Detail
ChrX:37688180 Tssr160792 1906 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G A G G G A G G G G G G A G G G G G G G G G G G G
rs219339073
MGI SNP Detail
ChrX:37688286 Tssr160792 1800 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239493679
MGI SNP Detail
ChrX:37688325 Tssr160792 1761 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs252272131
MGI SNP Detail
ChrX:37688339 Tssr160792 1747 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G A G G G A G G G G G G A G G G G G G G G G G G G
rs220843853
MGI SNP Detail
ChrX:37688457 Tssr160792 1629 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C A C C C C
rs245458672
MGI SNP Detail
ChrX:37688459 Tssr160792 1627 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C A C C C C
rs264224804
MGI SNP Detail
ChrX:37688462 Tssr160792 1624 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235762610
MGI SNP Detail
ChrX:37688516 Tssr160792 1570 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239270331
MGI SNP Detail
ChrX:37688526 Tssr160792 1560 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T T A T T T T T T T T T T T T
rs258192188
MGI SNP Detail
ChrX:37688741 Tssr160792 1345 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225439303
MGI SNP Detail
ChrX:37688770 Tssr160792 1316 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244750865
MGI SNP Detail
ChrX:37688811 Tssr160792 1275 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212043999
MGI SNP Detail
ChrX:37688922 Tssr160792 1164 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C G C C C G C C C C C C G C C C C C C C C C C C C
rs228642944
MGI SNP Detail
ChrX:37689011 Tssr160792 1075 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs259204236
MGI SNP Detail
ChrX:37689174 Rr690812 within coordinates of
Tssr160792 912 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219120708
MGI SNP Detail
ChrX:37689382 Rr690812 within coordinates of
Tssr160792 704 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233908940
MGI SNP Detail
ChrX:37689400 Rr690812 within coordinates of
Tssr160792 686 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253272724
MGI SNP Detail
ChrX:37689439 Rr690812 within coordinates of
Tssr160792 647 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213345546
MGI SNP Detail
ChrX:37689690 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 396 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs584848954
MGI SNP Detail
ChrX:37689808 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 278 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232512671
MGI SNP Detail
ChrX:37689859 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 227 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255327189
MGI SNP Detail
ChrX:37689897 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 189 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T T T T T T
rs220401972
MGI SNP Detail
ChrX:37689933 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 153 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs242467727
MGI SNP Detail
ChrX:37689981 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 105 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263930654
MGI SNP Detail
ChrX:37690070 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 16 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227107383
MGI SNP Detail
ChrX:37690191 Mcts1 within coordinates of
Rr690813 within coordinates of
Tssr160792 40 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239601654
MGI SNP Detail
ChrX:37690231 Mcts1 within coordinates of
Tssr160792 80 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C T C C C T C C C C C C T C C C C C C C T C C C C
rs258175921
MGI SNP Detail
ChrX:37690534 Mcts1 within coordinates of
Tssr160792 383 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G
rs225423839
MGI SNP Detail
ChrX:37690593 Mcts1 within coordinates of
Tssr160792 442 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238535051
MGI SNP Detail
ChrX:37690608 Mcts1 within coordinates of
Tssr160792 457 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261642342
MGI SNP Detail
ChrX:37690626 Mcts1 within coordinates of
Tssr160792 475 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229480989
MGI SNP Detail
ChrX:37691132 Mcts1 within coordinates of
Tssr160792 981 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253776767
MGI SNP Detail
ChrX:37691243 Mcts1 within coordinates of
Tssr160792 1092 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C G G G G G G C G G G G G G G G G G
rs218958150
MGI SNP Detail
ChrX:37691316 Mcts1 within coordinates of
Tssr160792 1165 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227274124
MGI SNP Detail
ChrX:37691411 Mcts1 within coordinates of
Tssr160792 1260 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247262797
MGI SNP Detail
ChrX:37691564 Mcts1 within coordinates of
Tssr160792 1413 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213330283
MGI SNP Detail
ChrX:37691581 Mcts1 within coordinates of
Tssr160792 1430 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232449925
MGI SNP Detail
ChrX:37691658 Mcts1 within coordinates of
Tssr160792 1507 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs260640003
MGI SNP Detail
ChrX:37691678 Mcts1 within coordinates of
Tssr160792 1527 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs212563912
MGI SNP Detail
ChrX:37691740 Mcts1 within coordinates of
Tssr160792 1589 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241819793
MGI SNP Detail
ChrX:37691860 Mcts1 within coordinates of
Tssr160792 1709 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs260448139
MGI SNP Detail
ChrX:37691871 Mcts1 within coordinates of
Tssr160792 1720 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs223029911
MGI SNP Detail
ChrX:37691874 Mcts1 within coordinates of
Tssr160792 1723 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs579398343
MGI SNP Detail
ChrX:37691888 Mcts1 within coordinates of
Tssr160792 1737 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs581717777
MGI SNP Detail
ChrX:37691903 Mcts1 within coordinates of
Tssr160792 1752 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs585356760
MGI SNP Detail
ChrX:37691910 Mcts1 within coordinates of
Tssr160792 1759 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578453829
MGI SNP Detail
ChrX:37691911 Mcts1 within coordinates of
Tssr160792 1760 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233180604
MGI SNP Detail
ChrX:37691948 Mcts1 within coordinates of
Tssr160792 1797 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252312933
MGI SNP Detail
ChrX:37691994 Mcts1 within coordinates of
Tssr160792 1843 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219419851
MGI SNP Detail
ChrX:37692024 Mcts1 within coordinates of
Tssr160792 1873 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244187494
MGI SNP Detail
ChrX:37692147 Mcts1 within coordinates of
Tssr160792 1996 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
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Showing SNP(s) 1 - 52 of 52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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