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Mouse SNP Summary
Symbol
Name
ID 		Tssr160899
transcription start site region 160899
MGI:6088666

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247381228
MGI SNP Detail		 ChrX:47434674 Bcorl1 within coordinates of
Cpgi22696 within coordinates of
Tssr160899 1714 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215368676
MGI SNP Detail		 ChrX:47434786 Bcorl1 within coordinates of
Cpgi22696 within coordinates of
Tssr160899 1602 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs229437600
MGI SNP Detail		 ChrX:47434828 Bcorl1 within coordinates of
Cpgi22696 within coordinates of
Tssr160899 1560 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259511153
MGI SNP Detail		 ChrX:47434856 Bcorl1 within coordinates of
Cpgi22696 within coordinates of
Tssr160899 1532 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs213156173
MGI SNP Detail		 ChrX:47434974 Bcorl1 within coordinates of
Tssr160899 1414 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs236709212
MGI SNP Detail		 ChrX:47435007 Bcorl1 within coordinates of
Tssr160899 1381 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258261376
MGI SNP Detail		 ChrX:47435184 Bcorl1 within coordinates of
Tssr160899 1204 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs213323708
MGI SNP Detail		 ChrX:47435365 Bcorl1 within coordinates of
Tssr160899 1023 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30168614
MGI SNP Detail		 ChrX:47435376 Bcorl1 within coordinates of
Tssr160899 1012 bp upstream
 SNP C/T C C C C C C T T C C C C T C C T T T
rs30168617
MGI SNP Detail		 ChrX:47435513 Bcorl1 within coordinates of
Tssr160899 875 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
rs222466151
MGI SNP Detail		 ChrX:47435539 Bcorl1 within coordinates of
Tssr160899 849 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs247211211
MGI SNP Detail		 ChrX:47435585 Bcorl1 within coordinates of
Tssr160899 803 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs261440572
MGI SNP Detail		 ChrX:47435793 Bcorl1 within coordinates of
Tssr160899 595 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs30168620
MGI SNP Detail		 ChrX:47435802 Bcorl1 within coordinates of
Tssr160899 586 bp upstream
 SNP A/G G G G G G G G G G G A G G G G
rs220265812
MGI SNP Detail		 ChrX:47435813 Bcorl1 within coordinates of
Tssr160899 575 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246819887
MGI SNP Detail		 ChrX:47436074 Bcorl1 within coordinates of
Tssr160899 314 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257538918
MGI SNP Detail		 ChrX:47436075 Bcorl1 within coordinates of
Tssr160899 313 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225813021
MGI SNP Detail		 ChrX:47436288 Bcorl1 within coordinates of
Tssr160899 100 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30168623
MGI SNP Detail		 ChrX:47436318 Bcorl1 within coordinates of
Tssr160899 70 bp upstream
 SNP G/T G G G G G G T G G G T G G T G
rs259253398
MGI SNP Detail		 ChrX:47436412 Bcorl1 within coordinates of
Tssr160899 20 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs235140007
MGI SNP Detail		 ChrX:47436414 Bcorl1 within coordinates of
Tssr160899 22 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs254134102
MGI SNP Detail		 ChrX:47436456 Bcorl1 within coordinates of
Tssr160899 64 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs213566576
MGI SNP Detail		 ChrX:47436461 Bcorl1 within coordinates of
Tssr160899 69 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30169546
MGI SNP Detail		 ChrX:47436625 Bcorl1 within coordinates of
Tssr160899 233 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
rs244870870
MGI SNP Detail		 ChrX:47436647 Bcorl1 within coordinates of
Tssr160899 255 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214000363
MGI SNP Detail		 ChrX:47436699 Bcorl1 within coordinates of
Tssr160899 307 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233247434
MGI SNP Detail		 ChrX:47436956 Bcorl1 within coordinates of
Tssr160899 564 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250926995
MGI SNP Detail		 ChrX:47437044 Bcorl1 within coordinates of
Tssr160899 652 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217134860
MGI SNP Detail		 ChrX:47437071 Bcorl1 within coordinates of
Tssr160899 679 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241788179
MGI SNP Detail		 ChrX:47437121 Bcorl1 within coordinates of
Tssr160899 729 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256084158
MGI SNP Detail		 ChrX:47437141 Bcorl1 within coordinates of
Tssr160899 749 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219905381
MGI SNP Detail		 ChrX:47437200 Bcorl1 within coordinates of
Tssr160899 808 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243997330
MGI SNP Detail		 ChrX:47437281 Bcorl1 within coordinates of
Tssr160899 889 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251157164
MGI SNP Detail		 ChrX:47437426 Bcorl1 within coordinates of
Tssr160899 1034 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221827611
MGI SNP Detail		 ChrX:47437545 Bcorl1 within coordinates of
Tssr160899 1153 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30169549
MGI SNP Detail		 ChrX:47437675 Bcorl1 within coordinates of
Tssr160899 1283 bp downstream
 SNP G/T G G G G G G G G G G G G G G T
rs259157310
MGI SNP Detail		 ChrX:47437707 Bcorl1 within coordinates of
Tssr160899 1315 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233965625
MGI SNP Detail		 ChrX:47437749 Bcorl1 within coordinates of
Tssr160899 1357 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30169552
MGI SNP Detail		 ChrX:47437807 Bcorl1 within coordinates of
Tssr160899 1415 bp downstream
 SNP C/G C C C C C C C C C C G C C G C
rs262045860
MGI SNP Detail		 ChrX:47438191 Bcorl1 within coordinates of
Tssr160899 1799 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs228549217
MGI SNP Detail		 ChrX:47438202 Bcorl1 within coordinates of
Tssr160899 1810 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580488593
MGI SNP Detail		 ChrX:47438239 Bcorl1 within coordinates of
Tssr160899 1847 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244811832
MGI SNP Detail		 ChrX:47438273 Bcorl1 within coordinates of
Tssr160899 1881 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255749874
MGI SNP Detail		 ChrX:47438277 Bcorl1 within coordinates of
Tssr160899 1885 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227901169
MGI SNP Detail		 ChrX:47438281 Bcorl1 within coordinates of
Tssr160899 1889 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583667526
MGI SNP Detail		 ChrX:47438312 Bcorl1 within coordinates of
Tssr160899 1920 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245625219
MGI SNP Detail		 ChrX:47438334 Bcorl1 within coordinates of
Tssr160899 1942 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A A A A A A A A A A A A
rs218670706
MGI SNP Detail		 ChrX:47438373 Bcorl1 within coordinates of
Tssr160899 1981 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
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Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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