Tssr160962 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr160962
transcription start site region 160962
MGI:6088729

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Showing SNP(s) 1 - 49 of 49

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs260946858 MGI SNP Detail	ChrX:52360360	Tssr160962 1935 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs225195999 MGI SNP Detail	ChrX:52360427	Tssr160962 1868 bp upstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs33871476 MGI SNP Detail	ChrX:52360441	Tssr160962 1854 bp upstream	SNP	C/G				C	C											G
rs265332324 MGI SNP Detail	ChrX:52360453	Tssr160962 1842 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs230247339 MGI SNP Detail	ChrX:52360477	Tssr160962 1818 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs585677195 MGI SNP Detail	ChrX:52360578	Tssr160962 1717 bp upstream	SNP	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G		G	G	G
rs579083891 MGI SNP Detail	ChrX:52360588	Tssr160962 1707 bp upstream	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T		T	T	T
rs582398498 MGI SNP Detail	ChrX:52360592	Tssr160962 1703 bp upstream	SNP	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A
rs586837111 MGI SNP Detail	ChrX:52360706	Tssr160962 1589 bp upstream	SNP	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C		C	C	C	C		C	C	C	C	C		C	C	C	C	C	C			C	C	C	C	C	C	C		C	C	C	C
rs580151879 MGI SNP Detail	ChrX:52360755	Tssr160962 1540 bp upstream	SNP	G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G		G	G	G
rs258317216 MGI SNP Detail	ChrX:52360756	Tssr160962 1539 bp upstream	SNP	G/T	G	G			T	G	G	T	T	G	T	T	T	G	G	G	G	G	G	G	G	T	G	T		T	G	G	T	G	G	G	G	T		G	G		T	G	T		T	G	G	G	G		G	G		G	G	T
rs583531426 MGI SNP Detail	ChrX:52360850	Tssr160962 1445 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G		G	G	G		G	G		G	G	G		A	G	G	G	G	G	G	G		G	G	G
rs215789207 MGI SNP Detail	ChrX:52360915	Tssr160962 1380 bp upstream	SNP	C/T	T	T			T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T
rs587446432 MGI SNP Detail	ChrX:52360943	Tssr160962 1352 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		C	A	A	A	A
rs235281488 MGI SNP Detail	ChrX:52360991	Tssr160962 1304 bp upstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T		T	T	T	T	T	T		G	T	T	T	T	T	T	T	T	T	T	T	T
rs246646830 MGI SNP Detail	ChrX:52361123	Tssr160962 1172 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs212870424 MGI SNP Detail	ChrX:52361272	Tssr160962 1023 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs229868308 MGI SNP Detail	ChrX:52361375	Tssr160962 920 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs6193269 MGI SNP Detail	ChrX:52361536	Tssr160962 759 bp upstream	SNP	C/T																C								T
rs221805722 MGI SNP Detail	ChrX:52361777	Tssr160962 518 bp upstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs581831911 MGI SNP Detail	ChrX:52361928	Tssr160962 367 bp upstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A
rs238478101 MGI SNP Detail	ChrX:52362007	Tssr160962 288 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs262784636 MGI SNP Detail	ChrX:52362029	Tssr160962 266 bp upstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs223130128 MGI SNP Detail	ChrX:52362032	Tssr160962 263 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs30438024 MGI SNP Detail	ChrX:52362086	Tssr160962 209 bp upstream	SNP	C/T		C			C	C		C		C			C								T					C	C			C					T	C				C		T												C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs260896732 MGI SNP Detail	ChrX:52362114	Tssr160962 181 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs219234156 MGI SNP Detail	ChrX:52362252	Tssr160962 43 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30438027 MGI SNP Detail	ChrX:52362293	Tssr160962 2 bp upstream	SNP	A/G		G			G	G		G		G			G								A					G	G			G					A	G				G		A												G
rs30438030 MGI SNP Detail	ChrX:52362695	Pabir3 within coordinates of Tssr160962 389 bp downstream	SNP	C/T		T			T	T		T		T			T								T					T	T			T					T	T				T		T												C
rs230565388 MGI SNP Detail	ChrX:52362828	Pabir3 within coordinates of Tssr160962 522 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs253301607 MGI SNP Detail	ChrX:52362888	Pabir3 within coordinates of Tssr160962 582 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs265553488 MGI SNP Detail	ChrX:52362913	Pabir3 within coordinates of Tssr160962 607 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs229258707 MGI SNP Detail	ChrX:52362914	Pabir3 within coordinates of Tssr160962 608 bp downstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs246811638 MGI SNP Detail	ChrX:52363014	Pabir3 within coordinates of Tssr160962 708 bp downstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C	C	C	C	G	C	C	C	C	C	G	C	C	C	C	C	C		G	C	C	C	C	C	C	C	C	C	C	C	C
rs212853146 MGI SNP Detail	ChrX:52363136	Pabir3 within coordinates of Tssr160962 830 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs230000599 MGI SNP Detail	ChrX:52363155	Pabir3 within coordinates of Tssr160962 849 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs256099877 MGI SNP Detail	ChrX:52363277	Pabir3 within coordinates of Tssr160962 971 bp downstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T	G	T	T	T	T	T	T		G	T	T	T	T	T	T	T	T	T	T	T	T
rs47314413 MGI SNP Detail	ChrX:52363323	Pabir3 within coordinates of Tssr160962 1017 bp downstream	SNP	G				G	G
rs240882613 MGI SNP Detail	ChrX:52363399	Pabir3 within coordinates of Tssr160962 1093 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs258384750 MGI SNP Detail	ChrX:52363493	Pabir3 within coordinates of Tssr160962 1187 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs223266672 MGI SNP Detail	ChrX:52363613	Pabir3 within coordinates of Tssr160962 1307 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs235258522 MGI SNP Detail	ChrX:52363855	Pabir3 within coordinates of Tssr160962 1549 bp downstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs30438033 MGI SNP Detail	ChrX:52363966	Pabir3 within coordinates of Tssr160962 1660 bp downstream	SNP	C/T		C			C	C		C		C			C								T					C	C			C					T	C				C		T												C
rs30439095 MGI SNP Detail	ChrX:52364060	Pabir3 within coordinates of Tssr160962 1754 bp downstream	SNP	A/T		A			A	A		A		A			A								T					A	A			A					A	A				A		A												A
rs241627942 MGI SNP Detail	ChrX:52364078	Pabir3 within coordinates of Tssr160962 1772 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs30439097 MGI SNP Detail	ChrX:52364092	Pabir3 within coordinates of Tssr160962 1786 bp downstream	SNP	C/T		C			C	C		C		C			C								T					C	C			C					T	C				C		T												C
rs585204438 MGI SNP Detail	ChrX:52364156	Pabir3 within coordinates of Tssr160962 1850 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A		A		A	A	C	A	A	A	A
rs30439100 MGI SNP Detail	ChrX:52364190	Pabir3 within coordinates of Tssr160962 1884 bp downstream	SNP	A/G		G			G	G		G		G			G								A					G	G			G					A	G				G		A												G
rs586725924 MGI SNP Detail	ChrX:52364228	Pabir3 within coordinates of Tssr160962 1922 bp downstream	SNP	C/T	T	T			T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T		T		T	T	C	T	T	T	T

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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