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Mouse SNP Summary
Symbol
Name
ID 		Tssr160985
transcription start site region 160985
MGI:6088752

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Showing SNP(s) 1 - 44 of 44

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231758308
MGI SNP Detail		 ChrX:55498221 Tssr160985 1975 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253573090
MGI SNP Detail		 ChrX:55498248 Tssr160985 1948 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224110508
MGI SNP Detail		 ChrX:55498271 Tssr160985 1925 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs248208413
MGI SNP Detail		 ChrX:55498356 Tssr160985 1840 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs265883281
MGI SNP Detail		 ChrX:55498357 Tssr160985 1839 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221220225
MGI SNP Detail		 ChrX:55498385 Tssr160985 1811 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs235670548
MGI SNP Detail		 ChrX:55498437 Tssr160985 1759 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs255964021
MGI SNP Detail		 ChrX:55498500 Gm61797 within coordinates of
Tssr160985 1696 bp upstream
 SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C
rs224928481
MGI SNP Detail		 ChrX:55498530 Gm61797 within coordinates of
Tssr160985 1666 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238001863
MGI SNP Detail		 ChrX:55498551 Gm61797 within coordinates of
Tssr160985 1645 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs263824755
MGI SNP Detail		 ChrX:55498623 Gm61797 within coordinates of
Tssr160985 1573 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232521902
MGI SNP Detail		 ChrX:55498711 Gm61797 within coordinates of
Tssr160985 1485 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254996332
MGI SNP Detail		 ChrX:55498771 Gm61797 within coordinates of
Tssr160985 1425 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs218406063
MGI SNP Detail		 ChrX:55498772 Gm61797 within coordinates of
Tssr160985 1424 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229060235
MGI SNP Detail		 ChrX:55498863 Gm61797 within coordinates of
Tssr160985 1333 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243668404
MGI SNP Detail		 ChrX:55498864 Gm61797 within coordinates of
Tssr160985 1332 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214508191
MGI SNP Detail		 ChrX:55498970 Gm61797 within coordinates of
Tssr160985 1226 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs231849304
MGI SNP Detail		 ChrX:55499009 Gm61797 within coordinates of
Tssr160985 1187 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253630490
MGI SNP Detail		 ChrX:55499041 Gm61797 within coordinates of
Tssr160985 1155 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs215726292
MGI SNP Detail		 ChrX:55499151 Gm61797 within coordinates of
Tssr160985 1045 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242974344
MGI SNP Detail		 ChrX:55499319 Gm61797 within coordinates of
Tssr160985 877 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260172582
MGI SNP Detail		 ChrX:55499335 Gm61797 within coordinates of
Tssr160985 861 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs220888431
MGI SNP Detail		 ChrX:55499381 Gm61797 within coordinates of
Tssr160985 815 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235731427
MGI SNP Detail		 ChrX:55499437 Gm61797 within coordinates of
Tssr160985 759 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs250258400
MGI SNP Detail		 ChrX:55499486 Gm61797 within coordinates of
Tssr160985 710 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219146054
MGI SNP Detail		 ChrX:55499573 Gm61797 within coordinates of
Tssr160985 623 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239705347
MGI SNP Detail		 ChrX:55499613 Gm61797 within coordinates of
Tssr160985 583 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265410117
MGI SNP Detail		 ChrX:55499658 Gm61797 within coordinates of
Tssr160985 538 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232009509
MGI SNP Detail		 ChrX:55499797 Gm61797 within coordinates of
Tssr160985 399 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C C
rs251845275
MGI SNP Detail		 ChrX:55499924 Gm61797 within coordinates of
Tssr160985 272 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264175077
MGI SNP Detail		 ChrX:55500187 Rr406100 within coordinates of
Tssr160985 9 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs225226937
MGI SNP Detail		 ChrX:55500419 Ints6l within coordinates of
Tssr160985 210 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A
rs243747855
MGI SNP Detail		 ChrX:55501125 Cpgi22728 within coordinates of
Ints6l within coordinates of
Tssr160985 916 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214566690
MGI SNP Detail		 ChrX:55501258 Cpgi22728 within coordinates of
Ints6l within coordinates of
Tssr160985 1049 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A T A A A A
rs225925288
MGI SNP Detail		 ChrX:55501393 Cpgi22728 within coordinates of
Ints6l within coordinates of
Tssr160985 1184 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs253253957
MGI SNP Detail		 ChrX:55501402 Cpgi22728 within coordinates of
Ints6l within coordinates of
Tssr160985 1193 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs216236137
MGI SNP Detail		 ChrX:55501407 Cpgi22728 within coordinates of
Ints6l within coordinates of
Tssr160985 1198 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240313700
MGI SNP Detail		 ChrX:55501536 Ints6l within coordinates of
Tssr160985 1327 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T
rs263731850
MGI SNP Detail		 ChrX:55501542 Ints6l within coordinates of
Tssr160985 1333 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs212747604
MGI SNP Detail		 ChrX:55501923 Ints6l within coordinates of
Tssr160985 1714 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs229889240
MGI SNP Detail		 ChrX:55501975 Ints6l within coordinates of
Tssr160985 1766 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T
rs250320932
MGI SNP Detail		 ChrX:55502078 Ints6l within coordinates of
Tssr160985 1869 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219204586
MGI SNP Detail		 ChrX:55502096 Ints6l within coordinates of
Tssr160985 1887 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs239765371
MGI SNP Detail		 ChrX:55502174 Ints6l within coordinates of
Tssr160985 1965 bp downstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
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Showing SNP(s) 1 - 44 of 44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory