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Mouse SNP Summary
Symbol
Name
ID 		Tssr161285
transcription start site region 161285
MGI:6089052

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Showing SNP(s) 1 - 51 of 51

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SNP Density Heatmap
ChrX from 72,758,545 bp to 72,762,670 bp
(4,126 bp)
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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3164768
MGI SNP Detail		 ChrX:72758609 Bcap31 within coordinates of
Tssr161285 1936 bp upstream
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A A G G G G G G G G G G A G G G
rs245608202
MGI SNP Detail		 ChrX:72758764 Bcap31 within coordinates of
Tssr161285 1781 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256587417
MGI SNP Detail		 ChrX:72758766 Bcap31 within coordinates of
Tssr161285 1779 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225593201
MGI SNP Detail		 ChrX:72758782 Bcap31 within coordinates of
Tssr161285 1763 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243354121
MGI SNP Detail		 ChrX:72758822 Bcap31 within coordinates of
Tssr161285 1723 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs29039143
MGI SNP Detail		 ChrX:72758894 Bcap31 within coordinates of
Tssr161285 1651 bp upstream
 SNP C/T C C C C C C C C T C C C
rs243277166
MGI SNP Detail		 ChrX:72758895 Bcap31 within coordinates of
Tssr161285 1650 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253958184
MGI SNP Detail		 ChrX:72758915 Bcap31 within coordinates of
Tssr161285 1630 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217259132
MGI SNP Detail		 ChrX:72758949 Bcap31 within coordinates of
Tssr161285 1596 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234710990
MGI SNP Detail		 ChrX:72758969 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1576 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252793089
MGI SNP Detail		 ChrX:72758987 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1558 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220298410
MGI SNP Detail		 ChrX:72759127 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1418 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs231532110
MGI SNP Detail		 ChrX:72759146 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1399 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261476401
MGI SNP Detail		 ChrX:72759147 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1398 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs31670030
MGI SNP Detail		 ChrX:72759166 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1379 bp upstream
 SNP A/C C C C A C C C C C
rs250969025
MGI SNP Detail		 ChrX:72759169 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1376 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G
rs263849110
MGI SNP Detail		 ChrX:72759222 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1323 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3164769
MGI SNP Detail		 ChrX:72759260 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1285 bp upstream
 SNP G/T G T T T G T T T G T G G G
rs238919101
MGI SNP Detail		 ChrX:72759443 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1102 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585019505
MGI SNP Detail		 ChrX:72759506 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1039 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs256750510
MGI SNP Detail		 ChrX:72759513 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1032 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs225736771
MGI SNP Detail		 ChrX:72759518 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 1027 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs250132936
MGI SNP Detail		 ChrX:72759568 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 977 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs579576582
MGI SNP Detail		 ChrX:72759666 Bcap31 within coordinates of
Rr691928 within coordinates of
Tssr161285 879 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs29039142
MGI SNP Detail		 ChrX:72759702 Bcap31 within coordinates of
Cpgi22777 within coordinates of
Rr691928 within coordinates of
Tssr161285 843 bp upstream
 SNP A/C C C C C C C C C C C C C A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233990971
MGI SNP Detail		 ChrX:72759824 Cpgi22777 within coordinates of
Rr691931 within coordinates of
Tssr161285 721 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A A A A A A A G A A A
rs259377292
MGI SNP Detail		 ChrX:72759936 Cpgi22777 within coordinates of
Rr691931 within coordinates of
Tssr161285 609 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A
rs29039141
MGI SNP Detail		 ChrX:72760239 Abcd1 within coordinates of
Rr406105 within coordinates of
Rr691931 within coordinates of
Tssr161285 306 bp upstream
 SNP A/G G G G G G G G G G A G G G G
rs8258812
MGI SNP Detail		 ChrX:72760253 Abcd1 within coordinates of
Rr406105 within coordinates of
Rr691931 within coordinates of
Tssr161285 292 bp upstream
 SNP C/T C C C C C C C C T
rs234004854
MGI SNP Detail		 ChrX:72760576 Abcd1 within coordinates of
Tssr161285 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245820283
MGI SNP Detail		 ChrX:72760685 Abcd1 within coordinates of
Cpgi22778 within coordinates of
Tssr161285 15 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs214358757
MGI SNP Detail		 ChrX:72761075 Abcd1 within coordinates of
Tssr161285 405 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29039140
MGI SNP Detail		 ChrX:72761263 Abcd1 within coordinates of
Gm61833 within coordinates of
Tssr161285 593 bp downstream
 SNP C/T C C C C C C C C T C C T C
rs256119077
MGI SNP Detail		 ChrX:72761368 Abcd1 within coordinates of
Gm61833 within coordinates of
Tssr161285 698 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs8258813
MGI SNP Detail		 ChrX:72761566 Abcd1 within coordinates of
Tssr161285 896 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G A
rs3166628
MGI SNP Detail		 ChrX:72761595 Abcd1 within coordinates of
Tssr161285 925 bp downstream
 SNP A/C C C A A A A A A A A A A A A A A A A C C A A A A
rs8258814
MGI SNP Detail		 ChrX:72761597 Abcd1 within coordinates of
Tssr161285 927 bp downstream
 SNP C/T T T T T T T T T T T T T T T C
rs3166629
MGI SNP Detail		 ChrX:72761650 Abcd1 within coordinates of
Tssr161285 980 bp downstream
 SNP A/T T A A A A A A A A A A A A A A A A T T T A A A T
rs8258815
MGI SNP Detail		 ChrX:72761679 Abcd1 within coordinates of
Tssr161285 1009 bp downstream
 SNP C/G G C C C G C C C G G C C C G G ? G
rs250183896
MGI SNP Detail		 ChrX:72761728 Abcd1 within coordinates of
Tssr161285 1058 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29039139
MGI SNP Detail		 ChrX:72761942 Abcd1 within coordinates of
Tssr161285 1272 bp downstream
 SNP C/T C C C C C C C T C C T C
rs245471509
MGI SNP Detail		 ChrX:72762049 Abcd1 within coordinates of
Tssr161285 1379 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs29039138
MGI SNP Detail		 ChrX:72762138 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1468 bp downstream
 SNP G/T G G G G T G G G T G G T G
rs235303197
MGI SNP Detail		 ChrX:72762202 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1532 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247870867
MGI SNP Detail		 ChrX:72762211 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1541 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260076716
MGI SNP Detail		 ChrX:72762255 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1585 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227566175
MGI SNP Detail		 ChrX:72762300 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1630 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245767863
MGI SNP Detail		 ChrX:72762384 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1714 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs213724595
MGI SNP Detail		 ChrX:72762594 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1924 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs225708045
MGI SNP Detail		 ChrX:72762620 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1950 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254188801
MGI SNP Detail		 ChrX:72762622 Abcd1 within coordinates of
Rr691932 within coordinates of
Tssr161285 1952 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
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Showing SNP(s) 1 - 51 of 51
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory