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Mouse SNP Summary
Symbol
Name
ID 		Tssr161330
transcription start site region 161330
MGI:6089097

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217795367
MGI SNP Detail
Alliance Variant		 ChrX:73345723 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1908 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs232969866
MGI SNP Detail
Alliance Variant		 ChrX:73345884 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1747 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs252044115
MGI SNP Detail
Alliance Variant		 ChrX:73345907 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1724 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214919788
MGI SNP Detail
Alliance Variant		 ChrX:73345908 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1723 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231260804
MGI SNP Detail
Alliance Variant		 ChrX:73345909 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1722 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243929811
MGI SNP Detail
Alliance Variant		 ChrX:73345956 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1675 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs211748494
MGI SNP Detail
Alliance Variant		 ChrX:73346275 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1356 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236732562
MGI SNP Detail
Alliance Variant		 ChrX:73346325 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1306 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263990740
MGI SNP Detail
Alliance Variant		 ChrX:73346406 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1225 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225218683
MGI SNP Detail
Alliance Variant		 ChrX:73346436 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1195 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31071347
MGI SNP Detail
Alliance Variant		 ChrX:73346445 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1186 bp upstream
 SNP A/G A A G G G A
rs258033058
MGI SNP Detail
Alliance Variant		 ChrX:73346470 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1161 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219482748
MGI SNP Detail
Alliance Variant		 ChrX:73346571 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 1060 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236882663
MGI SNP Detail
Alliance Variant		 ChrX:73346643 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 988 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253936565
MGI SNP Detail
Alliance Variant		 ChrX:73346726 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 905 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222792758
MGI SNP Detail
Alliance Variant		 ChrX:73347242 Atp6ap1 Intron
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 389 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241518570
MGI SNP Detail
Alliance Variant		 ChrX:73347355 Atp6ap1 Coding-NonSynonymous
Atp6ap1 Intron
Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 276 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265927724
MGI SNP Detail
Alliance Variant		 ChrX:73347617 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 14 bp upstream
 SNP C/T C C C C C C C C C C T T T
rs232253307
MGI SNP Detail
Alliance Variant		 ChrX:73347764 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 122 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs582637726
MGI SNP Detail
Alliance Variant		 ChrX:73347816 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 174 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs257151151
MGI SNP Detail
Alliance Variant		 ChrX:73347864 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 222 bp downstream
 SNP A/G G G G G G G G G G G G G G G A
rs262716006
MGI SNP Detail
Alliance Variant		 ChrX:73347892 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 250 bp downstream
 SNP A/C A A A A A A A A A A A A A C
rs225494281
MGI SNP Detail
Alliance Variant		 ChrX:73347965 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 323 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244076839
MGI SNP Detail
Alliance Variant		 ChrX:73348029 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 387 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs211713120
MGI SNP Detail
Alliance Variant		 ChrX:73348054 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 412 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236089749
MGI SNP Detail
Alliance Variant		 ChrX:73348083 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Tssr161330 441 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs254267185
MGI SNP Detail
Alliance Variant		 ChrX:73348158 Atp6ap1 mRNA-UTR
Atp6ap1 Noncoding-Transcript-Variant
Rr692006 within coordinates of
Tssr161330 516 bp downstream
 SNP C/T T T T T T T T T T T T C
rs217636804
MGI SNP Detail		 ChrX:73348386 Rr692006 within coordinates of
Tssr161330 744 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs238255607
MGI SNP Detail		 ChrX:73348387 Rr692006 within coordinates of
Tssr161330 745 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262582067
MGI SNP Detail		 ChrX:73348397 Rr692006 within coordinates of
Tssr161330 755 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219616176
MGI SNP Detail		 ChrX:73348509 Rr692006 within coordinates of
Tssr161330 867 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C C
rs585646306
MGI SNP Detail		 ChrX:73348514 Rr692006 within coordinates of
Tssr161330 872 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230852482
MGI SNP Detail
Alliance Variant		 ChrX:73348692 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Rr692007 within coordinates of
Tssr161330 1050 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs248352761
MGI SNP Detail
Alliance Variant		 ChrX:73348712 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Rr692007 within coordinates of
Tssr161330 1070 bp downstream
Tssr161334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs222751935
MGI SNP Detail
Alliance Variant		 ChrX:73348840 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Rr692007 within coordinates of
Tssr161330 1198 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs250309731
MGI SNP Detail
Alliance Variant		 ChrX:73348873 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1231 bp downstream
Tssr161335 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264008197
MGI SNP Detail
Alliance Variant		 ChrX:73348908 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1266 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C G C C C C C C G C C C C C C C C C C C
rs225113342
MGI SNP Detail
Alliance Variant		 ChrX:73348919 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1277 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582766579
MGI SNP Detail
Alliance Variant		 ChrX:73348921 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1279 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs13461164
MGI SNP Detail
Alliance Variant		 ChrX:73348924 Cpgi22795 within coordinates of
Gdi1 mRNA-UTR
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1282 bp downstream
 SNP A/G G A A A
rs258183127
MGI SNP Detail
Alliance Variant		 ChrX:73349105 Cpgi22795 within coordinates of
Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1463 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225662764
MGI SNP Detail
Alliance Variant		 ChrX:73349178 Cpgi22795 within coordinates of
Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1536 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs244044479
MGI SNP Detail
Alliance Variant		 ChrX:73349248 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1606 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs255850687
MGI SNP Detail
Alliance Variant		 ChrX:73349251 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1609 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A
rs228930847
MGI SNP Detail
Alliance Variant		 ChrX:73349284 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1642 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs258793110
MGI SNP Detail
Alliance Variant		 ChrX:73349298 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1656 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs216303007
MGI SNP Detail
Alliance Variant		 ChrX:73349399 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1757 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs232533150
MGI SNP Detail
Alliance Variant		 ChrX:73349495 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1853 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs213887470
MGI SNP Detail
Alliance Variant		 ChrX:73349587 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1945 bp downstream
 SNP G/T G T G G T G G T T T G G T T G G G G T G G G G G G G G G G
rs230990786
MGI SNP Detail
Alliance Variant		 ChrX:73349599 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1957 bp downstream
 SNP G/T G G G G T G T G G G G G G G G G T T G G G G G T G T T G G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585566654
MGI SNP Detail
Alliance Variant		 ChrX:73349603 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1961 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs248318088
MGI SNP Detail
Alliance Variant		 ChrX:73349616 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1974 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs217468083
MGI SNP Detail
Alliance Variant		 ChrX:73349617 Gdi1 Intron
Gdi1 Noncoding-Transcript-Variant
Rr692007 within coordinates of
Tssr161330 1975 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 53 of 53
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory